RNA–Protein interactions for RNA: ENST00000341060.3

TDP2-201, Transcript of tyrosyl-DNA phosphodiesterase 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TDP2, Length 2,120 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2-201ENST00000341060 RPL30P62888 115 aaKnown RBP12.2□□□□□ -0.46
TDP2-201ENST00000341060 PNRC1Q12796 327 aaPredicted RBP12.2□□□□□ -0.46
TDP2-201ENST00000341060 WDR82Q6UXN9 313 aa12.2□□□□□ -0.46
TDP2-201ENST00000341060 WDR31Q8NA23 367 aa12.2□□□□□ -0.46
TDP2-201ENST00000341060 OR52L2PQ8NGH6 319 aa12.2□□□□□ -0.46
TDP2-201ENST00000341060 TIMM9Q9Y5J7 89 aa12.2□□□□□ -0.46
TDP2-201ENST00000341060 DSPP15924 2871 aaKnown RBP12.2□□□□□ -0.46
TDP2-201ENST00000341060 ATXN7O15265 892 aaPredicted RBP12.2□□□□□ -0.46
TDP2-201ENST00000341060 AGFG2O95081 481 aa12.2□□□□□ -0.46
TDP2-201ENST00000341060 CLDN1O95832 211 aa12.2□□□□□ -0.46
TDP2-201ENST00000341060 KRASP01116 189 aa12.2□□□□□ -0.46
TDP2-201ENST00000341060 KITLGP21583 273 aa12.2□□□□□ -0.46
TDP2-201ENST00000341060 TUBG1P23258 451 aa12.2□□□□□ -0.46
TDP2-201ENST00000341060 GABRA2P47869 451 aa12.2□□□□□ -0.46
TDP2-201ENST00000341060 FGF8P55075 233 aaPredicted RBP12.2□□□□□ -0.46
TDP2-201ENST00000341060 ERVFRD-1P60508 538 aa12.2□□□□□ -0.46
TDP2-201ENST00000341060 VWA1Q6PCB0 445 aa12.2□□□□□ -0.46
TDP2-201ENST00000341060 Q6ZR03 302 aa12.2□□□□□ -0.46
TDP2-201ENST00000341060 FDCSPQ8NFU4 85 aa12.2□□□□□ -0.46
TDP2-201ENST00000341060 TUBG2Q9NRH3 451 aa12.2□□□□□ -0.46
TDP2-201ENST00000341060 ODAMA1E959 279 aa12.19□□□□□ -0.46
TDP2-201ENST00000341060 LRRC30A6NM36 301 aa12.19□□□□□ -0.46
TDP2-201ENST00000341060 ZNF891A8MT65 544 aaPredicted RBP12.19□□□□□ -0.46
TDP2-201ENST00000341060 AQP7O14520 342 aa12.19□□□□□ -0.46
TDP2-201ENST00000341060 CXCL1P09341 107 aa12.19□□□□□ -0.46
TDP2-201ENST00000341060 BRWD1-AS2P59051 145 aa12.19□□□□□ -0.46
TDP2-201ENST00000341060 HOXA4Q00056 320 aaPredicted RBP12.19□□□□□ -0.46
TDP2-201ENST00000341060 OR2B11Q5JQS5 317 aa12.19□□□□□ -0.46
TDP2-201ENST00000341060 ZNF343Q6P1L6 599 aa12.19□□□□□ -0.46
TDP2-201ENST00000341060 CENPVQ7Z7K6 275 aaPredicted RBP12.19□□□□□ -0.46
TDP2-201ENST00000341060 TCTEX1D1Q8N7M0 179 aa12.19□□□□□ -0.46
TDP2-201ENST00000341060 CA5BP1Q8WTZ4 195 aa12.19□□□□□ -0.46
TDP2-201ENST00000341060 MAP1LC3B2A6NCE7 125 aa12.19□□□□□ -0.46
TDP2-201ENST00000341060 IFNL4K9M1U5 179 aa12.19□□□□□ -0.46
TDP2-201ENST00000341060 S1PR2O95136 353 aa12.19□□□□□ -0.46
TDP2-201ENST00000341060 PTBP3O95758 552 aaKnown RBP12.19□□□□□ -0.46
TDP2-201ENST00000341060 CECR9P0C854 216 aa12.19□□□□□ -0.46
TDP2-201ENST00000341060 ZNF816Q0VGE8 651 aaPredicted RBP12.19□□□□□ -0.46
TDP2-201ENST00000341060 PMS2P11Q13670 270 aa12.19□□□□□ -0.46
TDP2-201ENST00000341060 PRAMEF6Q5VXH4 476 aa12.19□□□□□ -0.46
TDP2-201ENST00000341060 OR8G2PQ6IF36 304 aa12.19□□□□□ -0.46
TDP2-201ENST00000341060 FAM53AQ6NSI3 398 aaPredicted RBP12.19□□□□□ -0.46
TDP2-201ENST00000341060 SLC16A13Q7RTY0 426 aa12.19□□□□□ -0.46
TDP2-201ENST00000341060 MRGPRGQ86SM5 289 aa12.19□□□□□ -0.46
TDP2-201ENST00000341060 ZNF808Q8N4W9 903 aaPredicted RBP12.19□□□□□ -0.46
TDP2-201ENST00000341060 C9orf106Q8NAJ2 232 aa12.19□□□□□ -0.46
TDP2-201ENST00000341060 MRGPRDQ8TDS7 321 aa12.19□□□□□ -0.46
TDP2-201ENST00000341060 TCTEX1D2Q8WW35 142 aa12.19□□□□□ -0.46
TDP2-201ENST00000341060 ZNF251Q9BRH9 671 aa12.19□□□□□ -0.46
TDP2-201ENST00000341060 MAP1LC3BQ9GZQ8 125 aa12.19□□□□□ -0.46
TDP2-201ENST00000341060 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.19□□□□□ -0.46
TDP2-201ENST00000341060 VAX2Q9UIW0 290 aa12.19□□□□□ -0.46
TDP2-201ENST00000341060 SPTBN2O15020 2390 aa12.19□□□□□ -0.46
TDP2-201ENST00000341060 NKX2-8O15522 239 aa12.18□□□□□ -0.46
TDP2-201ENST00000341060 TIMM8AO60220 97 aaPredicted RBP12.18□□□□□ -0.46
TDP2-201ENST00000341060 WISP2O76076 250 aa12.18□□□□□ -0.46
TDP2-201ENST00000341060 CCL11P51671 97 aa12.18□□□□□ -0.46
TDP2-201ENST00000341060 ELLP55199 621 aaPredicted RBP12.18□□□□□ -0.46
TDP2-201ENST00000341060 B2MP61769 119 aa12.18□□□□□ -0.46
TDP2-201ENST00000341060 SMIM21Q3B7S5 101 aa12.18□□□□□ -0.46
TDP2-201ENST00000341060 IGFL2Q6UWQ7 119 aa12.18□□□□□ -0.46
TDP2-201ENST00000341060 NANPQ8TBE9 248 aa12.18□□□□□ -0.46
TDP2-201ENST00000341060 LURAP1Q96LR2 239 aa12.18□□□□□ -0.46
TDP2-201ENST00000341060 TMEM242Q9NWH2 141 aa12.18□□□□□ -0.46
TDP2-201ENST00000341060 URGCP-MRPS24S4R325 110 aa12.18□□□□□ -0.46
TDP2-201ENST00000341060 C17orf98A8MV24 154 aa12.17□□□□□ -0.46
TDP2-201ENST00000341060 CLDN14O95500 239 aa12.17□□□□□ -0.46
TDP2-201ENST00000341060 IFNA1P01562 189 aa12.17□□□□□ -0.46
TDP2-201ENST00000341060 SSTR5P35346 364 aa12.17□□□□□ -0.46
TDP2-201ENST00000341060 PAX5Q02548 391 aa12.17□□□□□ -0.46
TDP2-201ENST00000341060 KIAA0141Q14154 515 aaPredicted RBP12.17□□□□□ -0.46
TDP2-201ENST00000341060 ATP6V1FQ16864 119 aa12.17□□□□□ -0.46
TDP2-201ENST00000341060 UFSP2Q9NUQ7 469 aa12.17□□□□□ -0.46
TDP2-201ENST00000341060 LAMP3Q9UQV4 416 aa12.17□□□□□ -0.46
TDP2-201ENST00000341060 PMS2P5A8MQ11 134 aa12.17□□□□□ -0.46
TDP2-201ENST00000341060 CLN5O75503 358 aa12.17□□□□□ -0.46
TDP2-201ENST00000341060 IGKV1D-33P01593 117 aa12.17□□□□□ -0.46
TDP2-201ENST00000341060 IGKV1-33P01594 117 aa12.17□□□□□ -0.46
TDP2-201ENST00000341060 IGLV1-44P01699 117 aa12.17□□□□□ -0.46
TDP2-201ENST00000341060 TFF1P04155 84 aa12.17□□□□□ -0.46
TDP2-201ENST00000341060 EIF2S3P41091 472 aaKnown RBP12.17□□□□□ -0.46
TDP2-201ENST00000341060 COL10A1Q03692 680 aa12.17□□□□□ -0.46
TDP2-201ENST00000341060 SRSF6Q13247 344 aaKnown RBP12.17□□□□□ -0.46
TDP2-201ENST00000341060 BTNL3Q6UXE8 466 aa12.17□□□□□ -0.46
TDP2-201ENST00000341060 RPP25LQ8N5L8 163 aaKnown RBP12.17□□□□□ -0.46
TDP2-201ENST00000341060 OR13A1Q8NGR1 328 aa12.17□□□□□ -0.46
TDP2-201ENST00000341060 SARAFQ96BY9 339 aa12.17□□□□□ -0.46
TDP2-201ENST00000341060 MSL2Q9HCI7 577 aa12.17□□□□□ -0.46
TDP2-201ENST00000341060 CLN8Q9UBY8 286 aa12.17□□□□□ -0.46
TDP2-201ENST00000341060 TGIF2-C20orf24A0A0A6YYL0 155 aa12.16□□□□□ -0.46
TDP2-201ENST00000341060 A0A1B0GWJ7 208 aa12.16□□□□□ -0.46
TDP2-201ENST00000341060 TM4SF5O14894 197 aa12.16□□□□□ -0.46
TDP2-201ENST00000341060 RAB29O14966 203 aa12.16□□□□□ -0.46
TDP2-201ENST00000341060 CYB5R3P00387 301 aaPredicted RBP12.16□□□□□ -0.46
TDP2-201ENST00000341060 FABP6P51161 128 aa12.16□□□□□ -0.46
TDP2-201ENST00000341060 ZNF718Q3SXZ3 478 aa12.16□□□□□ -0.46
TDP2-201ENST00000341060 MBNL2Q5VZF2 373 aaKnown RBP12.16□□□□□ -0.46
TDP2-201ENST00000341060 ZNF66Q6ZN08 573 aa12.16□□□□□ -0.46
TDP2-201ENST00000341060 DTD1Q8TEA8 209 aa12.16□□□□□ -0.46
TDP2-201ENST00000341060 TMEM147Q9BVK8 224 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms