RNA–Protein interactions for RNA: ENST00000338468.7

PRKN-201, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 1,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-201ENST00000338468 ETV7Q9Y603 341 aa12.01□□□□□ -0.49
PRKN-201ENST00000338468 AP4M1O00189 453 aa12□□□□□ -0.49
PRKN-201ENST00000338468 NDUFA3O95167 84 aa12□□□□□ -0.49
PRKN-201ENST00000338468 GSTP1P09211 210 aaKnown RBP12□□□□□ -0.49
PRKN-201ENST00000338468 TALDO1P37837 337 aa12□□□□□ -0.49
PRKN-201ENST00000338468 LSM3P62310 102 aaKnown RBP12□□□□□ -0.49
PRKN-201ENST00000338468 CFHR3Q02985 330 aa12□□□□□ -0.49
PRKN-201ENST00000338468 FOXRED2Q8IWF2 684 aa12□□□□□ -0.49
PRKN-201ENST00000338468 ZNF383Q8NA42 475 aa12□□□□□ -0.49
PRKN-201ENST00000338468 DRAXINQ8NBI3 349 aaPredicted RBP12□□□□□ -0.49
PRKN-201ENST00000338468 PHF21AQ96BD5 680 aa12□□□□□ -0.49
PRKN-201ENST00000338468 OR5H14A6NHG9 310 aa11.99□□□□□ -0.49
PRKN-201ENST00000338468 NBR2O15453 112 aa11.99□□□□□ -0.49
PRKN-201ENST00000338468 SCGNO76038 276 aa11.99□□□□□ -0.49
PRKN-201ENST00000338468 SOX6P35712 828 aa11.99□□□□□ -0.49
PRKN-201ENST00000338468 C5orf64Q2M2E5 130 aa11.99□□□□□ -0.49
PRKN-201ENST00000338468 C18orf65Q6ZTR6 163 aa11.99□□□□□ -0.49
PRKN-201ENST00000338468 H1FOOQ8IZA3 346 aaPredicted RBP11.99□□□□□ -0.49
PRKN-201ENST00000338468 OR4F17Q8NGA8 305 aa11.99□□□□□ -0.49
PRKN-201ENST00000338468 OR13F1Q8NGS4 319 aa11.99□□□□□ -0.49
PRKN-201ENST00000338468 OR10J5Q8NHC4 309 aa11.99□□□□□ -0.49
PRKN-201ENST00000338468 OR4F4Q96R69 305 aa11.99□□□□□ -0.49
PRKN-201ENST00000338468 SPATA2Q9UM82 520 aa11.99□□□□□ -0.49
PRKN-201ENST00000338468 PLXNB1O43157 2135 aa11.99□□□□□ -0.49
PRKN-201ENST00000338468 DNAH3Q8TD57 4116 aa11.99□□□□□ -0.49
PRKN-201ENST00000338468 HLA-DRB1P01911 266 aa11.98□□□□□ -0.49
PRKN-201ENST00000338468 IGF1P05019 195 aa11.98□□□□□ -0.49
PRKN-201ENST00000338468 OR8U9P0C7N5 309 aa11.98□□□□□ -0.49
PRKN-201ENST00000338468 PNLIPRP3Q17RR3 467 aa11.98□□□□□ -0.49
PRKN-201ENST00000338468 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.98□□□□□ -0.49
PRKN-201ENST00000338468 OR8U1Q8NH10 309 aa11.98□□□□□ -0.49
PRKN-201ENST00000338468 ST6GALNAC5Q9BVH7 336 aa11.98□□□□□ -0.49
PRKN-201ENST00000338468 FUNDC2Q9BWH2 189 aa11.98□□□□□ -0.49
PRKN-201ENST00000338468 OR2D2Q9H210 308 aa11.98□□□□□ -0.49
PRKN-201ENST00000338468 DCSTAMPQ9H295 470 aa11.98□□□□□ -0.49
PRKN-201ENST00000338468 SDHAF2Q9NX18 166 aa11.98□□□□□ -0.49
PRKN-201ENST00000338468 ZNF221Q9UK13 617 aa11.98□□□□□ -0.49
PRKN-201ENST00000338468 ZNF580Q9UK33 172 aa11.98□□□□□ -0.49
PRKN-201ENST00000338468 GAB2Q9UQC2 676 aa11.98□□□□□ -0.49
PRKN-201ENST00000338468 WASHC3Q9Y3C0 194 aa11.98□□□□□ -0.49
PRKN-201ENST00000338468 NOTCH3Q9UM47 2321 aa11.98□□□□□ -0.49
PRKN-201ENST00000338468 TRAV18A0A075B6X5 111 aa11.97□□□□□ -0.49
PRKN-201ENST00000338468 A0A0A6YYH2 397 aa11.97□□□□□ -0.49
PRKN-201ENST00000338468 IGHV7-81A0A0B4J1V7 117 aa11.97□□□□□ -0.49
PRKN-201ENST00000338468 A6NJ64 397 aa11.97□□□□□ -0.49
PRKN-201ENST00000338468 G3V4G9 280 aa11.97□□□□□ -0.49
PRKN-201ENST00000338468 M0R1X1 148 aa11.97□□□□□ -0.49
PRKN-201ENST00000338468 TMEM127O75204 238 aa11.97□□□□□ -0.49
PRKN-201ENST00000338468 IGKV1-16P04430 117 aa11.97□□□□□ -0.49
PRKN-201ENST00000338468 TFAP2AP05549 437 aa11.97□□□□□ -0.49
PRKN-201ENST00000338468 MC5RP33032 325 aa11.97□□□□□ -0.49
PRKN-201ENST00000338468 NCS1P62166 190 aa11.97□□□□□ -0.49
PRKN-201ENST00000338468 RPL23AP62750 156 aaKnown RBP11.97□□□□□ -0.49
PRKN-201ENST00000338468 PITPNAQ00169 270 aa11.97□□□□□ -0.49
PRKN-201ENST00000338468 SAMD5Q5TGI4 173 aa11.97□□□□□ -0.49
PRKN-201ENST00000338468 H7C2Y5 167 aa11.96□□□□□ -0.49
PRKN-201ENST00000338468 FCN1O00602 326 aa11.96□□□□□ -0.49
PRKN-201ENST00000338468 RRHO14718 337 aa11.96□□□□□ -0.49
PRKN-201ENST00000338468 RRP9O43818 475 aaKnown RBP11.96□□□□□ -0.49
PRKN-201ENST00000338468 PTHLHP12272 177 aa11.96□□□□□ -0.49
PRKN-201ENST00000338468 GNG2P59768 71 aa11.96□□□□□ -0.49
PRKN-201ENST00000338468 SLC35B1P78383 322 aa11.96□□□□□ -0.49
PRKN-201ENST00000338468 NDPQ00604 133 aa11.96□□□□□ -0.49
PRKN-201ENST00000338468 BEAN1Q3B7T3 259 aa11.96□□□□□ -0.49
PRKN-201ENST00000338468 KHDC1LQ5JSQ8 128 aa11.96□□□□□ -0.49
PRKN-201ENST00000338468 ETV3LQ6ZN32 361 aa11.96□□□□□ -0.49
PRKN-201ENST00000338468 LCNL1Q6ZST4 164 aa11.96□□□□□ -0.49
PRKN-201ENST00000338468 REC114Q7Z4M0 266 aa11.96□□□□□ -0.49
PRKN-201ENST00000338468 CROCCP3Q8IVE0 287 aa11.96□□□□□ -0.49
PRKN-201ENST00000338468 COMMD1Q8N668 190 aa11.96□□□□□ -0.49
PRKN-201ENST00000338468 RNF152Q8N8N0 203 aa11.96□□□□□ -0.49
PRKN-201ENST00000338468 WFDC9Q8NEX5 89 aa11.96□□□□□ -0.49
PRKN-201ENST00000338468 SLC25A46Q96AG3 418 aa11.96□□□□□ -0.49
PRKN-201ENST00000338468 GINS4Q9BRT9 223 aa11.96□□□□□ -0.49
PRKN-201ENST00000338468 OR51J1Q9H342 316 aa11.96□□□□□ -0.49
PRKN-201ENST00000338468 FBXL15Q9H469 300 aa11.96□□□□□ -0.49
PRKN-201ENST00000338468 AUNIPQ9H7T9 357 aa11.96□□□□□ -0.49
PRKN-201ENST00000338468 ATP6V0E1O15342 81 aa11.95□□□□□ -0.5
PRKN-201ENST00000338468 RBBP9O75884 186 aa11.95□□□□□ -0.5
PRKN-201ENST00000338468 IGHG4P01861 327 aa11.95□□□□□ -0.5
PRKN-201ENST00000338468 RPLP1P05386 114 aaKnown RBP11.95□□□□□ -0.5
PRKN-201ENST00000338468 PPIFP30405 207 aaKnown RBP11.95□□□□□ -0.5
PRKN-201ENST00000338468 VBP1P61758 197 aa11.95□□□□□ -0.5
PRKN-201ENST00000338468 LIN54Q6MZP7 749 aa11.95□□□□□ -0.5
PRKN-201ENST00000338468 TEX38Q6PEX7 206 aa11.95□□□□□ -0.5
PRKN-201ENST00000338468 GVQW1Q8N7I0 195 aa11.95□□□□□ -0.5
PRKN-201ENST00000338468 RNF5Q99942 180 aa11.95□□□□□ -0.5
PRKN-201ENST00000338468 NAA50Q9GZZ1 169 aaKnown RBP11.95□□□□□ -0.5
PRKN-201ENST00000338468 ANXA10Q9UJ72 324 aa11.95□□□□□ -0.5
PRKN-201ENST00000338468 FBXO7Q9Y3I1 522 aa11.95□□□□□ -0.5
PRKN-201ENST00000338468 G3V318 75 aa11.94□□□□□ -0.5
PRKN-201ENST00000338468 IGLV2-14P01704 120 aa11.94□□□□□ -0.5
PRKN-201ENST00000338468 PF4V1P10720 104 aa11.94□□□□□ -0.5
PRKN-201ENST00000338468 EGR2P11161 476 aaPredicted RBP11.94□□□□□ -0.5
PRKN-201ENST00000338468 NFYAP23511 347 aaPredicted RBP11.94□□□□□ -0.5
PRKN-201ENST00000338468 FOXE3Q13461 319 aa11.94□□□□□ -0.5
PRKN-201ENST00000338468 PSG5Q15238 335 aa11.94□□□□□ -0.5
PRKN-201ENST00000338468 C19orf54Q5BKX5 351 aa11.94□□□□□ -0.5
PRKN-201ENST00000338468 KPRPQ5T749 579 aaPredicted RBP11.94□□□□□ -0.5
PRKN-201ENST00000338468 CNIH2Q6PI25 160 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms