RNA–Protein interactions for RNA: ENST00000336219.3

CDCA4-201, Transcript of cell division cycle associated 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDCA4, Length 2,513 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA4-201ENST00000336219 RNF150Q9ULK6 438 aa16.79■□□□□ 0.28
CDCA4-201ENST00000336219 MED13Q9UHV7 2174 aa16.79■□□□□ 0.28
CDCA4-201ENST00000336219 LRP5LA4QPB2 252 aa16.78■□□□□ 0.28
CDCA4-201ENST00000336219 KBTBD11O94819 623 aa16.78■□□□□ 0.28
CDCA4-201ENST00000336219 CLDN1O95832 211 aa16.78■□□□□ 0.28
CDCA4-201ENST00000336219 FGF7P21781 194 aa16.78■□□□□ 0.28
CDCA4-201ENST00000336219 USF2Q15853 346 aaPredicted RBP16.78■□□□□ 0.28
CDCA4-201ENST00000336219 FAM53AQ6NSI3 398 aaPredicted RBP16.78■□□□□ 0.28
CDCA4-201ENST00000336219 FUT9Q9Y231 359 aa16.78■□□□□ 0.28
CDCA4-201ENST00000336219 H7BYZ3 331 aa16.78■□□□□ 0.28
CDCA4-201ENST00000336219 SIRPB1O00241 398 aa16.78■□□□□ 0.28
CDCA4-201ENST00000336219 ST8SIA5O15466 376 aa16.78■□□□□ 0.28
CDCA4-201ENST00000336219 Q3ZCU0 254 aa16.78■□□□□ 0.28
CDCA4-201ENST00000336219 SPATA46Q5T0L3 261 aa16.78■□□□□ 0.28
CDCA4-201ENST00000336219 MKRN2OSH3BPM6 223 aa16.77■□□□□ 0.28
CDCA4-201ENST00000336219 MT-CO3P00414 261 aa16.77■□□□□ 0.28
CDCA4-201ENST00000336219 BMP5P22003 454 aa16.77■□□□□ 0.28
CDCA4-201ENST00000336219 OR4F5Q8NH21 305 aa16.77■□□□□ 0.28
CDCA4-201ENST00000336219 OR4F4Q96R69 305 aa16.77■□□□□ 0.28
CDCA4-201ENST00000336219 PYGO2Q9BRQ0 406 aa16.77■□□□□ 0.28
CDCA4-201ENST00000336219 GP6Q9HCN6 339 aa16.77■□□□□ 0.28
CDCA4-201ENST00000336219 WDFY4Q6ZS81 3184 aa16.77■□□□□ 0.28
CDCA4-201ENST00000336219 A0A1W2PNU3 283 aaPredicted RBP16.77■□□□□ 0.28
CDCA4-201ENST00000336219 PPP5D1E7EU14 171 aa16.77■□□□□ 0.28
CDCA4-201ENST00000336219 SSX2Q16385 188 aa16.77■□□□□ 0.28
CDCA4-201ENST00000336219 MOB1BQ7L9L4 216 aa16.77■□□□□ 0.28
CDCA4-201ENST00000336219 MDP1Q86V88 176 aa16.77■□□□□ 0.28
CDCA4-201ENST00000336219 TMEM9BQ9NQ34 198 aa16.77■□□□□ 0.28
CDCA4-201ENST00000336219 AURKAIP1Q9NWT8 199 aaPredicted RBP16.77■□□□□ 0.28
CDCA4-201ENST00000336219 IDH3GP51553 393 aaPredicted RBP16.76■□□□□ 0.27
CDCA4-201ENST00000336219 GNB2P62879 340 aa16.76■□□□□ 0.27
CDCA4-201ENST00000336219 PMP22Q01453 160 aa16.76■□□□□ 0.27
CDCA4-201ENST00000336219 ZNF497Q6ZNH5 498 aa16.76■□□□□ 0.27
CDCA4-201ENST00000336219 WDR86Q86TI4 376 aa16.76■□□□□ 0.27
CDCA4-201ENST00000336219 TGIF2LXQ8IUE1 241 aa16.76■□□□□ 0.27
CDCA4-201ENST00000336219 RNASEH2CQ8TDP1 164 aaKnown RBP16.76■□□□□ 0.27
CDCA4-201ENST00000336219 BCL2L2Q92843 193 aaPredicted RBP16.76■□□□□ 0.27
CDCA4-201ENST00000336219 RAMP3O60896 148 aa16.76■□□□□ 0.27
CDCA4-201ENST00000336219 MEOX1P50221 254 aa16.76■□□□□ 0.27
CDCA4-201ENST00000336219 NUBP1P53384 320 aa16.76■□□□□ 0.27
CDCA4-201ENST00000336219 FGFRL1Q8N441 504 aa16.76■□□□□ 0.27
CDCA4-201ENST00000336219 PINX1Q96BK5 328 aaKnown RBP16.76■□□□□ 0.27
CDCA4-201ENST00000336219 AGMATQ9BSE5 352 aa16.76■□□□□ 0.27
CDCA4-201ENST00000336219 CLN8Q9UBY8 286 aa16.76■□□□□ 0.27
CDCA4-201ENST00000336219 DOCK11Q5JSL3 2073 aa16.76■□□□□ 0.27
CDCA4-201ENST00000336219 ZDBF2Q9HCK1 2354 aa16.76■□□□□ 0.27
CDCA4-201ENST00000336219 C21orf140B9A014 251 aa16.75■□□□□ 0.27
CDCA4-201ENST00000336219 OR2H2O95918 312 aa16.75■□□□□ 0.27
CDCA4-201ENST00000336219 OR4A8P0C604 315 aa16.75■□□□□ 0.27
CDCA4-201ENST00000336219 VASH2Q86V25 355 aa16.75■□□□□ 0.27
CDCA4-201ENST00000336219 OR5B12Q96R08 314 aa16.75■□□□□ 0.27
CDCA4-201ENST00000336219 RTL8AQ9BWD3 113 aa16.75■□□□□ 0.27
CDCA4-201ENST00000336219 TRAPPC2LQ9UL33 140 aa16.75■□□□□ 0.27
CDCA4-201ENST00000336219 FAM186AA6NE01 2351 aa16.75■□□□□ 0.27
CDCA4-201ENST00000336219 EGR1P18146 543 aa16.75■□□□□ 0.27
CDCA4-201ENST00000336219 TFF3Q07654 80 aa16.75■□□□□ 0.27
CDCA4-201ENST00000336219 PMS2P11Q13670 270 aa16.75■□□□□ 0.27
CDCA4-201ENST00000336219 DRAM1Q8N682 238 aa16.75■□□□□ 0.27
CDCA4-201ENST00000336219 NANOS1Q8WY41 292 aaKnown RBP16.75■□□□□ 0.27
CDCA4-201ENST00000336219 LIN7CQ9NUP9 197 aaKnown RBP16.75■□□□□ 0.27
CDCA4-201ENST00000336219 SP1P08047 785 aa16.74■□□□□ 0.27
CDCA4-201ENST00000336219 ZNF883P0CG24 379 aa16.74■□□□□ 0.27
CDCA4-201ENST00000336219 PSMB3P49720 205 aa16.74■□□□□ 0.27
CDCA4-201ENST00000336219 ERVK11-1P61568 191 aa16.74■□□□□ 0.27
CDCA4-201ENST00000336219 SPINK9Q5DT21 86 aa16.74■□□□□ 0.27
CDCA4-201ENST00000336219 FBXW9Q5XUX1 488 aa16.74■□□□□ 0.27
CDCA4-201ENST00000336219 RAB24Q969Q5 203 aa16.74■□□□□ 0.27
CDCA4-201ENST00000336219 C2orf88Q9BSF0 95 aa16.74■□□□□ 0.27
CDCA4-201ENST00000336219 ACTR3CQ9C0K3 210 aaPredicted RBP16.74■□□□□ 0.27
CDCA4-201ENST00000336219 C1QTNF9BB2RNN3 333 aa16.74■□□□□ 0.27
CDCA4-201ENST00000336219 EREGO14944 169 aa16.74■□□□□ 0.27
CDCA4-201ENST00000336219 GYPAP02724 150 aa16.74■□□□□ 0.27
CDCA4-201ENST00000336219 CEACAM6P40199 344 aa16.74■□□□□ 0.27
CDCA4-201ENST00000336219 SCCPDHQ8NBX0 429 aa16.74■□□□□ 0.27
CDCA4-201ENST00000336219 A0A1B0GUS0 222 aa16.73■□□□□ 0.27
CDCA4-201ENST00000336219 PAGE4O60829 102 aa16.73■□□□□ 0.27
CDCA4-201ENST00000336219 KRASP01116 189 aa16.73■□□□□ 0.27
CDCA4-201ENST00000336219 G6PCP35575 357 aa16.73■□□□□ 0.27
CDCA4-201ENST00000336219 FAM3BP58499 235 aaPredicted RBP16.73■□□□□ 0.27
CDCA4-201ENST00000336219 ZNF816Q0VGE8 651 aaPredicted RBP16.73■□□□□ 0.27
CDCA4-201ENST00000336219 ACSF3Q4G176 576 aaPredicted RBP16.73■□□□□ 0.27
CDCA4-201ENST00000336219 TMEM14EPQ6UXP3 125 aa16.73■□□□□ 0.27
CDCA4-201ENST00000336219 Q8IYB0 196 aa16.73■□□□□ 0.27
CDCA4-201ENST00000336219 OR10G9Q8NGN4 311 aa16.73■□□□□ 0.27
CDCA4-201ENST00000336219 OR10G7Q8NGN6 311 aa16.73■□□□□ 0.27
CDCA4-201ENST00000336219 HRASP01112 189 aa16.73■□□□□ 0.27
CDCA4-201ENST00000336219 CHRNA7P36544 502 aa16.73■□□□□ 0.27
CDCA4-201ENST00000336219 HOXA4Q00056 320 aaPredicted RBP16.73■□□□□ 0.27
CDCA4-201ENST00000336219 TNFRSF9Q07011 255 aa16.73■□□□□ 0.27
CDCA4-201ENST00000336219 TMEM170AQ8WVE7 144 aa16.73■□□□□ 0.27
CDCA4-201ENST00000336219 ATG101Q9BSB4 218 aa16.73■□□□□ 0.27
CDCA4-201ENST00000336219 MBNL3Q9NUK0 354 aaKnown RBP16.73■□□□□ 0.27
CDCA4-201ENST00000336219 KLF13Q9Y2Y9 288 aaPredicted RBP16.73■□□□□ 0.27
CDCA4-201ENST00000336219 MUC3AQ02505 3323 aa16.73■□□□□ 0.27
CDCA4-201ENST00000336219 COL6A3P12111 3177 aa16.72■□□□□ 0.27
CDCA4-201ENST00000336219 NPPCP23582 126 aa16.72■□□□□ 0.27
CDCA4-201ENST00000336219 TBC1D28Q2M2D7 210 aa16.72■□□□□ 0.27
CDCA4-201ENST00000336219 FFAR4Q5NUL3 377 aa16.72■□□□□ 0.27
CDCA4-201ENST00000336219 MDS2Q8NDY4 140 aa16.72■□□□□ 0.27
CDCA4-201ENST00000336219 ZDHHC16Q969W1 377 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms