RNA–Protein interactions for RNA: ENST00000316707.10

PTPN13-201, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 7,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-201ENST00000316707 CLDN14O95500 239 aa4.05□□□□□ -1.76
PTPN13-201ENST00000316707 GCH1P30793 250 aa4.05□□□□□ -1.76
PTPN13-201ENST00000316707 TIMP3P35625 211 aa4.05□□□□□ -1.76
PTPN13-201ENST00000316707 IGFBP7Q16270 282 aa4.05□□□□□ -1.76
PTPN13-201ENST00000316707 RTL8BQ17RB0 113 aa4.05□□□□□ -1.76
PTPN13-201ENST00000316707 SYT13Q7L8C5 426 aa4.05□□□□□ -1.76
PTPN13-201ENST00000316707 MMD2Q8IY49 270 aa4.05□□□□□ -1.76
PTPN13-201ENST00000316707 YPEL2Q96QA6 119 aa4.05□□□□□ -1.76
PTPN13-201ENST00000316707 TRAPPC2LQ9UL33 140 aa4.05□□□□□ -1.76
PTPN13-201ENST00000316707 MUC22E2RYF6 1773 aaPredicted RBP4.05□□□□□ -1.76
PTPN13-201ENST00000316707 LOC102723996A0A087X1L8 192 aa4.05□□□□□ -1.76
PTPN13-201ENST00000316707 A0A1W2PN81 502 aa4.05□□□□□ -1.76
PTPN13-201ENST00000316707 S1PR2O95136 353 aa4.05□□□□□ -1.76
PTPN13-201ENST00000316707 NPSP0C0P6 89 aa4.05□□□□□ -1.76
PTPN13-201ENST00000316707 ANOS1P23352 680 aa4.05□□□□□ -1.76
PTPN13-201ENST00000316707 TGFBR3Q03167 851 aa4.05□□□□□ -1.76
PTPN13-201ENST00000316707 OR5T1Q8NG75 326 aa4.05□□□□□ -1.76
PTPN13-201ENST00000316707 BORCS7Q96B45 105 aa4.05□□□□□ -1.76
PTPN13-201ENST00000316707 AURKAIP1Q9NWT8 199 aaPredicted RBP4.05□□□□□ -1.76
PTPN13-201ENST00000316707 TBL2Q9Y4P3 447 aaKnown RBP4.05□□□□□ -1.76
PTPN13-201ENST00000316707 KIF26BQ2KJY2 2108 aa4.05□□□□□ -1.76
PTPN13-201ENST00000316707 IGKV1-39P01597 117 aa4.05□□□□□ -1.76
PTPN13-201ENST00000316707 IGKV1D-39P04432 117 aa4.05□□□□□ -1.76
PTPN13-201ENST00000316707 OR10J4P0C629 311 aa4.05□□□□□ -1.76
PTPN13-201ENST00000316707 OPRK1P41145 380 aa4.05□□□□□ -1.76
PTPN13-201ENST00000316707 PRRX1P54821 245 aa4.05□□□□□ -1.76
PTPN13-201ENST00000316707 ATP5IP56385 69 aaPredicted RBP4.05□□□□□ -1.76
PTPN13-201ENST00000316707 PLGLB1Q02325 96 aa4.05□□□□□ -1.76
PTPN13-201ENST00000316707 PHYHD1Q5SRE7 291 aa4.05□□□□□ -1.76
PTPN13-201ENST00000316707 MRGPRDQ8TDS7 321 aa4.05□□□□□ -1.76
PTPN13-201ENST00000316707 TAAR6Q96RI8 345 aa4.05□□□□□ -1.76
PTPN13-201ENST00000316707 CHRDL1Q9BU40 450 aa4.05□□□□□ -1.76
PTPN13-201ENST00000316707 LINC00470Q9BZP3 86 aa4.05□□□□□ -1.76
PTPN13-201ENST00000316707 MRPL33O75394 65 aaKnown RBP4.05□□□□□ -1.76
PTPN13-201ENST00000316707 ARR3P36575 388 aa4.05□□□□□ -1.76
PTPN13-201ENST00000316707 OR1D5P58170 312 aa4.05□□□□□ -1.76
PTPN13-201ENST00000316707 RHOBP62745 196 aa4.05□□□□□ -1.76
PTPN13-201ENST00000316707 RTP5Q14D33 572 aa4.05□□□□□ -1.76
PTPN13-201ENST00000316707 RPEL1Q2QD12 228 aa4.05□□□□□ -1.76
PTPN13-201ENST00000316707 ZNF585BQ52M93 769 aa4.05□□□□□ -1.76
PTPN13-201ENST00000316707 OR10J3Q5JRS4 329 aa4.05□□□□□ -1.76
PTPN13-201ENST00000316707 ZNF468Q5VIY5 522 aaPredicted RBP4.05□□□□□ -1.76
PTPN13-201ENST00000316707 DMRTA1Q5VZB9 504 aa4.05□□□□□ -1.76
PTPN13-201ENST00000316707 ALKBH3Q96Q83 286 aaPredicted RBP4.05□□□□□ -1.76
PTPN13-201ENST00000316707 PAM16Q9Y3D7 125 aa4.05□□□□□ -1.76
PTPN13-201ENST00000316707 ATXN7O15265 892 aaPredicted RBP4.04□□□□□ -1.76
PTPN13-201ENST00000316707 TNFSF12O43508 249 aa4.04□□□□□ -1.76
PTPN13-201ENST00000316707 TCF21O43680 179 aa4.04□□□□□ -1.76
PTPN13-201ENST00000316707 IGLC2P0DOY2 106 aa4.04□□□□□ -1.76
PTPN13-201ENST00000316707 IGLC3P0DOY3 106 aa4.04□□□□□ -1.76
PTPN13-201ENST00000316707 TDGF1P13385 188 aa4.04□□□□□ -1.76
PTPN13-201ENST00000316707 H2BFWTQ7Z2G1 175 aa4.04□□□□□ -1.76
PTPN13-201ENST00000316707 GCNT2Q8N0V5 402 aa4.04□□□□□ -1.76
PTPN13-201ENST00000316707 UCN2Q96RP3 112 aa4.04□□□□□ -1.76
PTPN13-201ENST00000316707 MRPL18Q9H0U6 180 aaKnown RBP4.04□□□□□ -1.76
PTPN13-201ENST00000316707 DLL3Q9NYJ7 618 aa4.04□□□□□ -1.76
PTPN13-201ENST00000316707 MTCH1Q9NZJ7 389 aa4.04□□□□□ -1.76
PTPN13-201ENST00000316707 SCN3AQ9NY46 2000 aa4.04□□□□□ -1.76
PTPN13-201ENST00000316707 PLXND1Q9Y4D7 1925 aa4.04□□□□□ -1.76
PTPN13-201ENST00000316707 DKK1O94907 266 aa4.04□□□□□ -1.76
PTPN13-201ENST00000316707 IGHEP01854 428 aa4.04□□□□□ -1.76
PTPN13-201ENST00000316707 BCL3P20749 454 aa4.04□□□□□ -1.76
PTPN13-201ENST00000316707 PDCD1Q15116 288 aa4.04□□□□□ -1.76
PTPN13-201ENST00000316707 Q6ZN92 141 aa4.04□□□□□ -1.76
PTPN13-201ENST00000316707 Q6ZPA2 131 aa4.04□□□□□ -1.76
PTPN13-201ENST00000316707 DTX1Q86Y01 620 aa4.04□□□□□ -1.76
PTPN13-201ENST00000316707 VN1R17PQ8TDU5 208 aa4.04□□□□□ -1.76
PTPN13-201ENST00000316707 RTL8AQ9BWD3 113 aa4.04□□□□□ -1.76
PTPN13-201ENST00000316707 ZNF581Q9P0T4 197 aa4.04□□□□□ -1.76
PTPN13-201ENST00000316707 TRGV10A0A0A0MS01 117 aa4.04□□□□□ -1.76
PTPN13-201ENST00000316707 NKX6-3A6NJ46 265 aa4.04□□□□□ -1.76
PTPN13-201ENST00000316707 RBFOX2O43251 390 aaKnown RBP eCLIP4.04□□□□□ -1.76
PTPN13-201ENST00000316707 CXCL13O43927 109 aa4.04□□□□□ -1.76
PTPN13-201ENST00000316707 P04436 131 aa4.04□□□□□ -1.76
PTPN13-201ENST00000316707 GNB1P62873 340 aa4.04□□□□□ -1.76
PTPN13-201ENST00000316707 Q6ZWC4 215 aa4.04□□□□□ -1.76
PTPN13-201ENST00000316707 APH1AQ96BI3 265 aa4.04□□□□□ -1.76
PTPN13-201ENST00000316707 TUBG2Q9NRH3 451 aa4.04□□□□□ -1.76
PTPN13-201ENST00000316707 TMEM167BQ9NRX6 74 aa4.04□□□□□ -1.76
PTPN13-201ENST00000316707 MRPL27Q9P0M9 148 aaKnown RBP4.04□□□□□ -1.76
PTPN13-201ENST00000316707 NAT8BQ9UHF3 227 aa4.04□□□□□ -1.76
PTPN13-201ENST00000316707 K7ERU9 68 aa4.04□□□□□ -1.76
PTPN13-201ENST00000316707 UBE2V1Q13404 147 aa4.04□□□□□ -1.76
PTPN13-201ENST00000316707 TRAT1Q6PIZ9 186 aa4.04□□□□□ -1.76
PTPN13-201ENST00000316707 HSD17B10Q99714 261 aaKnown RBP4.04□□□□□ -1.76
PTPN13-201ENST00000316707 OSTCQ9NRP0 149 aa4.04□□□□□ -1.76
PTPN13-201ENST00000316707 FREM3P0C091 2139 aa4.04□□□□□ -1.76
PTPN13-201ENST00000316707 IGHV2OR16-5A0A0B4J2B6 119 aa4.04□□□□□ -1.76
PTPN13-201ENST00000316707 ZNF716A6NP11 495 aa4.04□□□□□ -1.76
PTPN13-201ENST00000316707 K7EP13 123 aa4.04□□□□□ -1.76
PTPN13-201ENST00000316707 CDIPTO14735 213 aa4.04□□□□□ -1.76
PTPN13-201ENST00000316707 TOX4O94842 621 aa4.04□□□□□ -1.76
PTPN13-201ENST00000316707 TMPRSS3P57727 454 aa4.04□□□□□ -1.76
PTPN13-201ENST00000316707 KRTDAPP60985 99 aa4.04□□□□□ -1.76
PTPN13-201ENST00000316707 DRAM1Q8N682 238 aa4.04□□□□□ -1.76
PTPN13-201ENST00000316707 SLC24A4Q8NFF2 622 aa4.04□□□□□ -1.76
PTPN13-201ENST00000316707 OR6C1Q96RD1 312 aa4.04□□□□□ -1.76
PTPN13-201ENST00000316707 UBE2ZQ9H832 354 aaPredicted RBP4.04□□□□□ -1.76
PTPN13-201ENST00000316707 MRPS17Q9Y2R5 130 aaKnown RBP4.04□□□□□ -1.76
PTPN13-201ENST00000316707 DENND4CQ5VZ89 1909 aa4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms