RNA–Protein interactions for RNA: ENST00000315286.12

CCDC43-201, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC43, Length 2,082 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-201ENST00000315286 S1PR2O95136 353 aa15.21■□□□□ 0.03
CCDC43-201ENST00000315286 SPP1P10451 314 aa15.21■□□□□ 0.03
CCDC43-201ENST00000315286 G6PCP35575 357 aa15.21■□□□□ 0.03
CCDC43-201ENST00000315286 UTF1Q5T230 341 aa15.21■□□□□ 0.03
CCDC43-201ENST00000315286 HSD17B11Q8NBQ5 300 aa15.21■□□□□ 0.03
CCDC43-201ENST00000315286 OR5C1Q8NGR4 320 aa15.21■□□□□ 0.03
CCDC43-201ENST00000315286 RNASE6Q93091 150 aaKnown RBP15.21■□□□□ 0.03
CCDC43-201ENST00000315286 RAB40CQ96S21 281 aa15.21■□□□□ 0.03
CCDC43-201ENST00000315286 HSD17B10Q99714 261 aaKnown RBP15.21■□□□□ 0.03
CCDC43-201ENST00000315286 SH3BGRL3Q9H299 93 aa15.21■□□□□ 0.03
CCDC43-201ENST00000315286 HRH4Q9H3N8 390 aa15.21■□□□□ 0.03
CCDC43-201ENST00000315286 SAP30LQ9HAJ7 183 aa15.21■□□□□ 0.03
CCDC43-201ENST00000315286 COL6A6A6NMZ7 2263 aa15.21■□□□□ 0.03
CCDC43-201ENST00000315286 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP15.21■□□□□ 0.03
CCDC43-201ENST00000315286 RAB19A4D1S5 217 aa15.21■□□□□ 0.03
CCDC43-201ENST00000315286 H3BP45 60 aa15.21■□□□□ 0.03
CCDC43-201ENST00000315286 SYNGR2O43760 224 aa15.21■□□□□ 0.03
CCDC43-201ENST00000315286 SEC11BP0C7V7 166 aa15.21■□□□□ 0.03
CCDC43-201ENST00000315286 GRNP28799 593 aaKnown RBP15.21■□□□□ 0.03
CCDC43-201ENST00000315286 CHRNB4P30926 498 aa15.21■□□□□ 0.03
CCDC43-201ENST00000315286 GPR12P47775 334 aa15.21■□□□□ 0.03
CCDC43-201ENST00000315286 DYNLT3P51808 116 aa15.21■□□□□ 0.03
CCDC43-201ENST00000315286 FAM209AQ5JX71 171 aa15.21■□□□□ 0.03
CCDC43-201ENST00000315286 TMEM217Q8N7C4 229 aa15.21■□□□□ 0.03
CCDC43-201ENST00000315286 BPIFCQ8NFQ6 507 aa15.21■□□□□ 0.03
CCDC43-201ENST00000315286 EGLN1Q9GZT9 426 aa15.21■□□□□ 0.03
CCDC43-201ENST00000315286 FAM234AQ9H0X4 552 aa15.21■□□□□ 0.03
CCDC43-201ENST00000315286 KBTBD11-OT1A0A1B0GTJ5 212 aa15.2■□□□□ 0.02
CCDC43-201ENST00000315286 SIGLEC5O15389 551 aa15.2■□□□□ 0.02
CCDC43-201ENST00000315286 CLDN14O95500 239 aa15.2■□□□□ 0.02
CCDC43-201ENST00000315286 FBXL19-AS1Q494R0 122 aa15.2■□□□□ 0.02
CCDC43-201ENST00000315286 TCF23Q7RTU1 214 aa15.2■□□□□ 0.02
CCDC43-201ENST00000315286 MMP26Q9NRE1 261 aa15.2■□□□□ 0.02
CCDC43-201ENST00000315286 CLN8Q9UBY8 286 aa15.2■□□□□ 0.02
CCDC43-201ENST00000315286 YLPM1P49750 1951 aaKnown RBP15.2■□□□□ 0.02
CCDC43-201ENST00000315286 PIEZO1Q92508 2521 aa15.2■□□□□ 0.02
CCDC43-201ENST00000315286 TRGV10A0A0A0MS01 117 aa15.2■□□□□ 0.02
CCDC43-201ENST00000315286 P0C879 139 aa15.2■□□□□ 0.02
CCDC43-201ENST00000315286 RPL23AP62750 156 aaKnown RBP15.2■□□□□ 0.02
CCDC43-201ENST00000315286 BAXQ07812 192 aa15.2■□□□□ 0.02
CCDC43-201ENST00000315286 SWI5Q1ZZU3 235 aa15.2■□□□□ 0.02
CCDC43-201ENST00000315286 NCR3LG1Q68D85 454 aa15.2■□□□□ 0.02
CCDC43-201ENST00000315286 TCTEX1D1Q8N7M0 179 aa15.2■□□□□ 0.02
CCDC43-201ENST00000315286 LEAP2Q969E1 77 aa15.2■□□□□ 0.02
CCDC43-201ENST00000315286 FAM212BQ9NTI7 297 aaPredicted RBP15.2■□□□□ 0.02
CCDC43-201ENST00000315286 DLL1O00548 723 aa15.19■□□□□ 0.02
CCDC43-201ENST00000315286 TMPRSS2O15393 492 aa15.19■□□□□ 0.02
CCDC43-201ENST00000315286 TXNL1O43396 289 aa15.19■□□□□ 0.02
CCDC43-201ENST00000315286 CD3EP07766 207 aa15.19■□□□□ 0.02
CCDC43-201ENST00000315286 IAPPP10997 89 aa15.19■□□□□ 0.02
CCDC43-201ENST00000315286 DUTP33316 252 aaKnown RBP15.19■□□□□ 0.02
CCDC43-201ENST00000315286 AKR1C1Q04828 323 aa15.19■□□□□ 0.02
CCDC43-201ENST00000315286 ZNF266Q14584 549 aa15.19■□□□□ 0.02
CCDC43-201ENST00000315286 CDSNQ15517 529 aa15.19■□□□□ 0.02
CCDC43-201ENST00000315286 UQCC3Q6UW78 93 aa15.19■□□□□ 0.02
CCDC43-201ENST00000315286 KCNJ16Q9NPI9 418 aa15.19■□□□□ 0.02
CCDC43-201ENST00000315286 COA4Q9NYJ1 87 aa15.19■□□□□ 0.02
CCDC43-201ENST00000315286 NDRG3Q9UGV2 375 aa15.19■□□□□ 0.02
CCDC43-201ENST00000315286 WSB1Q9Y6I7 421 aa15.19■□□□□ 0.02
CCDC43-201ENST00000315286 TMEM178BH3BS89 294 aa15.18■□□□□ 0.02
CCDC43-201ENST00000315286 TOR1AO14656 332 aa15.18■□□□□ 0.02
CCDC43-201ENST00000315286 SLC31A2O15432 143 aa15.18■□□□□ 0.02
CCDC43-201ENST00000315286 CRYZL1O95825 349 aa15.18■□□□□ 0.02
CCDC43-201ENST00000315286 PLAUP00749 431 aa15.18■□□□□ 0.02
CCDC43-201ENST00000315286 ID4P47928 161 aa15.18■□□□□ 0.02
CCDC43-201ENST00000315286 BLOC1S1P78537 153 aa15.18■□□□□ 0.02
CCDC43-201ENST00000315286 SRSF3P84103 164 aaKnown RBP15.18■□□□□ 0.02
CCDC43-201ENST00000315286 ADORA2A-AS1P86434 159 aa15.18■□□□□ 0.02
CCDC43-201ENST00000315286 Q6ZRG5 221 aa15.18■□□□□ 0.02
CCDC43-201ENST00000315286 CCL17Q92583 94 aa15.18■□□□□ 0.02
CCDC43-201ENST00000315286 IFI27L2Q9H2X8 130 aa15.18■□□□□ 0.02
CCDC43-201ENST00000315286 PARP11Q9NR21 331 aa15.18■□□□□ 0.02
CCDC43-201ENST00000315286 GFOD1Q9NXC2 390 aa15.18■□□□□ 0.02
CCDC43-201ENST00000315286 COQ3Q9NZJ6 369 aa15.18■□□□□ 0.02
CCDC43-201ENST00000315286 ANKHD1Q8IWZ3 2542 aaKnown RBP15.18■□□□□ 0.02
CCDC43-201ENST00000315286 DOCK11Q5JSL3 2073 aa15.18■□□□□ 0.02
CCDC43-201ENST00000315286 TRAV38-1A0A0B4J264 116 aa15.18■□□□□ 0.02
CCDC43-201ENST00000315286 DANCRP0C864 163 aa15.18■□□□□ 0.02
CCDC43-201ENST00000315286 APOBEC3AP31941 199 aaPredicted RBP15.18■□□□□ 0.02
CCDC43-201ENST00000315286 PJVKQ0ZLH3 352 aa15.18■□□□□ 0.02
CCDC43-201ENST00000315286 RPL39P5Q59GN2 51 aa15.18■□□□□ 0.02
CCDC43-201ENST00000315286 BTNL8Q6UX41 500 aa15.18■□□□□ 0.02
CCDC43-201ENST00000315286 DYNLRB1Q9NP97 96 aa15.18■□□□□ 0.02
CCDC43-201ENST00000315286 NUP50Q9UKX7 468 aa15.18■□□□□ 0.02
CCDC43-201ENST00000315286 RFNGQ9Y644 331 aa15.18■□□□□ 0.02
CCDC43-201ENST00000315286 NUDT19A8MXV4 375 aa15.17■□□□□ 0.02
CCDC43-201ENST00000315286 TMEM267Q0VDI3 215 aaPredicted RBP15.17■□□□□ 0.02
CCDC43-201ENST00000315286 MIDNQ504T8 468 aa15.17■□□□□ 0.02
CCDC43-201ENST00000315286 FAM216AQ8WUB2 273 aa15.17■□□□□ 0.02
CCDC43-201ENST00000315286 NARS2Q96I59 477 aaKnown RBP15.17■□□□□ 0.02
CCDC43-201ENST00000315286 RAB9BQ9NP90 201 aa15.17■□□□□ 0.02
CCDC43-201ENST00000315286 PSENENQ9NZ42 101 aa15.17■□□□□ 0.02
CCDC43-201ENST00000315286 HCFC1P51610 2035 aa15.17■□□□□ 0.02
CCDC43-201ENST00000315286 PPIAL4EA0A075B759 164 aa15.16■□□□□ 0.02
CCDC43-201ENST00000315286 A0A1W2PPE3 182 aa15.16■□□□□ 0.02
CCDC43-201ENST00000315286 PPIAL4DF5H284 164 aa15.16■□□□□ 0.02
CCDC43-201ENST00000315286 M0R1X1 148 aa15.16■□□□□ 0.02
CCDC43-201ENST00000315286 ATG12O94817 140 aa15.16■□□□□ 0.02
CCDC43-201ENST00000315286 PPIAL4FP0DN26 164 aa15.16■□□□□ 0.02
CCDC43-201ENST00000315286 SULT1A1P50225 295 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms