RNA–Protein interactions for RNA: ENST00000300213.8

CCNDBP1-201, Transcript of cyclin D1 binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCNDBP1, Length 3,660 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNDBP1-201ENST00000300213 GABRG3Q99928 467 aa12.54□□□□□ -0.4
CCNDBP1-201ENST00000300213 CLCF1Q9UBD9 225 aa12.54□□□□□ -0.4
CCNDBP1-201ENST00000300213 RNF115Q9Y4L5 304 aa12.54□□□□□ -0.4
CCNDBP1-201ENST00000300213 ABCA1O95477 2261 aa12.54□□□□□ -0.4
CCNDBP1-201ENST00000300213 RSPO1Q2MKA7 263 aaPredicted RBP12.54□□□□□ -0.4
CCNDBP1-201ENST00000300213 Q6ZPA2 131 aa12.54□□□□□ -0.4
CCNDBP1-201ENST00000300213 UHRF2Q96PU4 802 aa12.54□□□□□ -0.4
CCNDBP1-201ENST00000300213 SPOCK3Q9BQ16 436 aa12.54□□□□□ -0.4
CCNDBP1-201ENST00000300213 HINT2Q9BX68 163 aa12.54□□□□□ -0.4
CCNDBP1-201ENST00000300213 BET1LQ9NYM9 111 aa12.54□□□□□ -0.4
CCNDBP1-201ENST00000300213 EP300Q09472 2414 aaPredicted RBP12.54□□□□□ -0.4
CCNDBP1-201ENST00000300213 LNP1A1A4G5 178 aa12.53□□□□□ -0.4
CCNDBP1-201ENST00000300213 EN2P19622 333 aaPredicted RBP12.53□□□□□ -0.4
CCNDBP1-201ENST00000300213 DRD1P21728 446 aa12.53□□□□□ -0.4
CCNDBP1-201ENST00000300213 FXYD3Q14802 87 aa12.53□□□□□ -0.4
CCNDBP1-201ENST00000300213 HLA-DRB5Q30154 266 aa12.53□□□□□ -0.4
CCNDBP1-201ENST00000300213 OIT3Q8WWZ8 545 aa12.53□□□□□ -0.4
CCNDBP1-201ENST00000300213 ZDHHC16Q969W1 377 aa12.53□□□□□ -0.4
CCNDBP1-201ENST00000300213 SFRP2Q96HF1 295 aa12.53□□□□□ -0.4
CCNDBP1-201ENST00000300213 DNAJC13O75165 2243 aa12.53□□□□□ -0.4
CCNDBP1-201ENST00000300213 TMEM250H0YL14 139 aa12.53□□□□□ -0.4
CCNDBP1-201ENST00000300213 LDLRAD2Q5SZI1 272 aa12.53□□□□□ -0.4
CCNDBP1-201ENST00000300213 MRPL21Q7Z2W9 205 aaKnown RBP12.53□□□□□ -0.4
CCNDBP1-201ENST00000300213 LINC01551Q86U37 167 aa12.53□□□□□ -0.4
CCNDBP1-201ENST00000300213 HAPLN4Q86UW8 402 aa12.53□□□□□ -0.4
CCNDBP1-201ENST00000300213 OR5L2Q8NGL0 311 aa12.53□□□□□ -0.4
CCNDBP1-201ENST00000300213 ZNF703Q9H7S9 590 aaPredicted RBP12.53□□□□□ -0.4
CCNDBP1-201ENST00000300213 THSD7BQ9C0I4 1608 aa12.53□□□□□ -0.4
CCNDBP1-201ENST00000300213 TRANK1O15050 2925 aa12.53□□□□□ -0.4
CCNDBP1-201ENST00000300213 FBXL7Q9UJT9 491 aa12.53□□□□□ -0.4
CCNDBP1-201ENST00000300213 TCFL5Q9UL49 500 aa12.53□□□□□ -0.4
CCNDBP1-201ENST00000300213 PXMP4Q9Y6I8 212 aa12.53□□□□□ -0.4
CCNDBP1-201ENST00000300213 A0A1B0GX78 115 aa12.52□□□□□ -0.4
CCNDBP1-201ENST00000300213 A8MXE2 369 aa12.52□□□□□ -0.4
CCNDBP1-201ENST00000300213 LINC00271P0C7V0 271 aa12.52□□□□□ -0.4
CCNDBP1-201ENST00000300213 SRYQ05066 204 aa12.52□□□□□ -0.4
CCNDBP1-201ENST00000300213 TPTE2P1Q5T6R2 138 aa12.52□□□□□ -0.4
CCNDBP1-201ENST00000300213 ASPHD1Q5U4P2 390 aa12.52□□□□□ -0.4
CCNDBP1-201ENST00000300213 YRDCQ86U90 279 aaKnown RBP12.52□□□□□ -0.4
CCNDBP1-201ENST00000300213 KMT5CQ86Y97 462 aa12.52□□□□□ -0.4
CCNDBP1-201ENST00000300213 UQCR10Q9UDW1 63 aa12.52□□□□□ -0.4
CCNDBP1-201ENST00000300213 H0Y980 276 aa12.52□□□□□ -0.41
CCNDBP1-201ENST00000300213 ACTL6BO94805 426 aa12.52□□□□□ -0.41
CCNDBP1-201ENST00000300213 GABRG2P18507 467 aa12.52□□□□□ -0.41
CCNDBP1-201ENST00000300213 PAFAH1B2P68402 229 aa12.52□□□□□ -0.41
CCNDBP1-201ENST00000300213 CEACAM16Q2WEN9 425 aa12.52□□□□□ -0.41
CCNDBP1-201ENST00000300213 SSMEM1Q8WWF3 244 aa12.52□□□□□ -0.41
CCNDBP1-201ENST00000300213 OR5P3Q8WZ94 311 aa12.52□□□□□ -0.41
CCNDBP1-201ENST00000300213 MTCH1Q9NZJ7 389 aa12.52□□□□□ -0.41
CCNDBP1-201ENST00000300213 RBFOX2O43251 390 aaKnown RBP eCLIP12.52□□□□□ -0.411e-7■■■■■ 26.9
CCNDBP1-201ENST00000300213 DUSP3P51452 185 aaPredicted RBP12.52□□□□□ -0.41
CCNDBP1-201ENST00000300213 SSC4DQ8WTU2 575 aa12.52□□□□□ -0.41
CCNDBP1-201ENST00000300213 PYGO2Q9BRQ0 406 aa12.52□□□□□ -0.41
CCNDBP1-201ENST00000300213 IL23AQ9NPF7 189 aa12.52□□□□□ -0.41
CCNDBP1-201ENST00000300213 IGKV3D-11A0A0A0MRZ8 115 aa12.51□□□□□ -0.41
CCNDBP1-201ENST00000300213 ETV2O00321 342 aaPredicted RBP12.51□□□□□ -0.41
CCNDBP1-201ENST00000300213 LINC01565O15544 149 aa12.51□□□□□ -0.41
CCNDBP1-201ENST00000300213 CA6P23280 308 aa12.51□□□□□ -0.41
CCNDBP1-201ENST00000300213 GNB1P62873 340 aa12.51□□□□□ -0.41
CCNDBP1-201ENST00000300213 AAED1Q7RTV5 226 aa12.51□□□□□ -0.41
CCNDBP1-201ENST00000300213 SAXO1Q8IYX7 474 aa12.51□□□□□ -0.41
CCNDBP1-201ENST00000300213 NRN1Q9NPD7 142 aa12.51□□□□□ -0.41
CCNDBP1-201ENST00000300213 OR2W1Q9Y3N9 320 aa12.51□□□□□ -0.41
CCNDBP1-201ENST00000300213 TTC28Q96AY4 2481 aa12.51□□□□□ -0.41
CCNDBP1-201ENST00000300213 SYNGR1O43759 233 aa12.51□□□□□ -0.41
CCNDBP1-201ENST00000300213 ZG16O60844 167 aa12.51□□□□□ -0.41
CCNDBP1-201ENST00000300213 TNFRSF4P43489 277 aa12.51□□□□□ -0.41
CCNDBP1-201ENST00000300213 RELBQ01201 579 aa12.51□□□□□ -0.41
CCNDBP1-201ENST00000300213 DNASE2BQ8WZ79 361 aa12.51□□□□□ -0.41
CCNDBP1-201ENST00000300213 ARL2-SNX15V9GYD0 113 aa12.51□□□□□ -0.41
CCNDBP1-201ENST00000300213 SCO2A0A1W2PP80 73 aa12.51□□□□□ -0.41
CCNDBP1-201ENST00000300213 IGHV3-13P01766 116 aa12.51□□□□□ -0.41
CCNDBP1-201ENST00000300213 IGHV3-7P01780 117 aa12.51□□□□□ -0.41
CCNDBP1-201ENST00000300213 NPPCP23582 126 aa12.51□□□□□ -0.41
CCNDBP1-201ENST00000300213 ANKRD39Q53RE8 183 aa12.51□□□□□ -0.41
CCNDBP1-201ENST00000300213 FGFRL1Q8N441 504 aa12.51□□□□□ -0.41
CCNDBP1-201ENST00000300213 APOBEC3DQ96AK3 386 aaPredicted RBP12.51□□□□□ -0.41
CCNDBP1-201ENST00000300213 ATP23Q9Y6H3 246 aa12.51□□□□□ -0.41
CCNDBP1-201ENST00000300213 CNOT1A5YKK6 2376 aaKnown RBP12.5□□□□□ -0.41
CCNDBP1-201ENST00000300213 RAB29O14966 203 aa12.5□□□□□ -0.41
CCNDBP1-201ENST00000300213 PDLIM4P50479 330 aa12.5□□□□□ -0.41
CCNDBP1-201ENST00000300213 CACNA1EQ15878 2313 aa12.5□□□□□ -0.41
CCNDBP1-201ENST00000300213 TRIM61Q5EBN2 209 aa12.5□□□□□ -0.41
CCNDBP1-201ENST00000300213 KIAA0895LQ68EN5 471 aa12.5□□□□□ -0.41
CCNDBP1-201ENST00000300213 LYG1Q8N1E2 194 aa12.5□□□□□ -0.41
CCNDBP1-201ENST00000300213 OR4B1Q8NGF8 309 aa12.5□□□□□ -0.41
CCNDBP1-201ENST00000300213 PSMG3Q9BT73 122 aaPredicted RBP12.5□□□□□ -0.41
CCNDBP1-201ENST00000300213 IGKV1-6A0A0C4DH72 117 aa12.5□□□□□ -0.41
CCNDBP1-201ENST00000300213 C5orf49A4QMS7 147 aa12.5□□□□□ -0.41
CCNDBP1-201ENST00000300213 ZIC3O60481 467 aa12.5□□□□□ -0.41
CCNDBP1-201ENST00000300213 ZFAND5O76080 213 aa12.5□□□□□ -0.41
CCNDBP1-201ENST00000300213 CELA2AP08217 269 aa12.5□□□□□ -0.41
CCNDBP1-201ENST00000300213 COL8A2P25067 703 aa12.5□□□□□ -0.41
CCNDBP1-201ENST00000300213 KRTCAP3Q53RY4 240 aa12.5□□□□□ -0.41
CCNDBP1-201ENST00000300213 C20orf144Q9BQM9 153 aa12.5□□□□□ -0.41
CCNDBP1-201ENST00000300213 DEPPQ9NTK1 212 aa12.5□□□□□ -0.41
CCNDBP1-201ENST00000300213 ELOVL5Q9NYP7 299 aa12.5□□□□□ -0.41
CCNDBP1-201ENST00000300213 LCN2P80188 198 aa12.5□□□□□ -0.41
CCNDBP1-201ENST00000300213 SPATA46Q5T0L3 261 aa12.5□□□□□ -0.41
CCNDBP1-201ENST00000300213 C20orf204Q6ZNR8 217 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms