RNA–Protein interactions for RNA: ENST00000293880.9

SSRP1-202, Transcript of structure specific recognition protein 1, humanhuman

TSL 2

Gene SSRP1, Length 6,296 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-202ENST00000293880 SELENOKQ9Y6D0 94 aa13.97□□□□□ -0.17
SSRP1-202ENST00000293880 IGHV3-48P01763 117 aa13.97□□□□□ -0.17
SSRP1-202ENST00000293880 BIVMQ86UB2 503 aa13.97□□□□□ -0.17
SSRP1-202ENST00000293880 LSM10Q969L4 123 aaKnown RBP13.97□□□□□ -0.17
SSRP1-202ENST00000293880 A0A1W2PPV9 198 aa13.97□□□□□ -0.17
SSRP1-202ENST00000293880 CACNG7P62955 275 aa13.97□□□□□ -0.17
SSRP1-202ENST00000293880 WIPI2Q9Y4P8 454 aa13.97□□□□□ -0.17
SSRP1-202ENST00000293880 ARL14EPLP0DKL9 152 aa13.97□□□□□ -0.17
SSRP1-202ENST00000293880 LRRC3BQ96PB8 259 aa13.97□□□□□ -0.17
SSRP1-202ENST00000293880 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.96□□□□□ -0.17
SSRP1-202ENST00000293880 UPK3AO75631 287 aa13.96□□□□□ -0.17
SSRP1-202ENST00000293880 PRDX2P32119 198 aa13.96□□□□□ -0.17
SSRP1-202ENST00000293880 CCL8P80075 99 aa13.96□□□□□ -0.17
SSRP1-202ENST00000293880 ZNF826PQ6ZT77 177 aa13.96□□□□□ -0.17
SSRP1-202ENST00000293880 OR1L8Q8NGR8 309 aa13.96□□□□□ -0.17
SSRP1-202ENST00000293880 GSN-AS1Q9NRJ2 163 aa13.96□□□□□ -0.17
SSRP1-202ENST00000293880 PATE3B3GLJ2 98 aa13.96□□□□□ -0.17
SSRP1-202ENST00000293880 SPINT1O43278 529 aa13.96□□□□□ -0.17
SSRP1-202ENST00000293880 C1QAP02745 245 aa13.96□□□□□ -0.17
SSRP1-202ENST00000293880 LSM6P62312 80 aaKnown RBP13.96□□□□□ -0.17
SSRP1-202ENST00000293880 BEND2Q8NDZ0 799 aa13.96□□□□□ -0.17
SSRP1-202ENST00000293880 HBZP02008 142 aa13.96□□□□□ -0.17
SSRP1-202ENST00000293880 CXorf66Q5JRM2 361 aaPredicted RBP13.96□□□□□ -0.17
SSRP1-202ENST00000293880 ASCL5Q7RTU5 278 aa13.96□□□□□ -0.17
SSRP1-202ENST00000293880 CHST5Q9GZS9 411 aa13.96□□□□□ -0.17
SSRP1-202ENST00000293880 DLX6P56179 175 aa13.96□□□□□ -0.18
SSRP1-202ENST00000293880 NIT1Q86X76 327 aa13.96□□□□□ -0.18
SSRP1-202ENST00000293880 HYPMO75409 117 aa13.95□□□□□ -0.18
SSRP1-202ENST00000293880 TRGC1P0CF51 173 aa13.95□□□□□ -0.18
SSRP1-202ENST00000293880 SRIP30626 198 aa13.95□□□□□ -0.18
SSRP1-202ENST00000293880 C8orf82Q6P1X6 216 aaPredicted RBP13.95□□□□□ -0.18
SSRP1-202ENST00000293880 ZNF645Q8N7E2 425 aa13.95□□□□□ -0.18
SSRP1-202ENST00000293880 A0A1W2PQD3 144 aa13.95□□□□□ -0.18
SSRP1-202ENST00000293880 SLC25A53Q5H9E4 307 aa13.95□□□□□ -0.18
SSRP1-202ENST00000293880 ZNF721Q8TF20 911 aa13.95□□□□□ -0.18
SSRP1-202ENST00000293880 METTL26Q96S19 204 aa13.95□□□□□ -0.18
SSRP1-202ENST00000293880 HSPB7Q9UBY9 170 aa13.95□□□□□ -0.18
SSRP1-202ENST00000293880 TRIP11Q15643 1979 aa13.95□□□□□ -0.18
SSRP1-202ENST00000293880 ZNF345Q14585 488 aa13.95□□□□□ -0.18
SSRP1-202ENST00000293880 APCDD1LQ8NCL9 501 aa13.95□□□□□ -0.18
SSRP1-202ENST00000293880 SEC11BP0C7V7 166 aa13.95□□□□□ -0.18
SSRP1-202ENST00000293880 C2orf83Q53S99 150 aa13.95□□□□□ -0.18
SSRP1-202ENST00000293880 TTTY12Q9BZ98 90 aa13.95□□□□□ -0.18
SSRP1-202ENST00000293880 WNT16Q9UBV4 365 aa13.95□□□□□ -0.18
SSRP1-202ENST00000293880 COL18A1P39060 1754 aa13.95□□□□□ -0.18
SSRP1-202ENST00000293880 TRAV8-6A0A0B4J262 113 aa13.95□□□□□ -0.18
SSRP1-202ENST00000293880 IGHV3-66A0A0C4DH42 116 aa13.95□□□□□ -0.18
SSRP1-202ENST00000293880 A0A0U1RQV5 110 aa13.95□□□□□ -0.18
SSRP1-202ENST00000293880 J3QT63 122 aa13.95□□□□□ -0.18
SSRP1-202ENST00000293880 FOCADQ5VW36 1801 aa13.95□□□□□ -0.18
SSRP1-202ENST00000293880 PAPPAQ13219 1627 aa13.94□□□□□ -0.18
SSRP1-202ENST00000293880 IGHV3OR16-10A0A075B7F0 116 aa13.94□□□□□ -0.18
SSRP1-202ENST00000293880 LINC00587B1AMM8 73 aa13.94□□□□□ -0.18
SSRP1-202ENST00000293880 LIFP15018 202 aa13.94□□□□□ -0.18
SSRP1-202ENST00000293880 SAPCD1Q5SSQ6 148 aa13.94□□□□□ -0.18
SSRP1-202ENST00000293880 ZDHHC8Q9ULC8 765 aa13.94□□□□□ -0.18
SSRP1-202ENST00000293880 RBFOX2O43251 390 aaKnown RBP eCLIP13.94□□□□□ -0.181e-6■□□□□ 9.6
SSRP1-202ENST00000293880 OR2H2O95918 312 aa13.94□□□□□ -0.18
SSRP1-202ENST00000293880 PPP1R17O96001 155 aa13.94□□□□□ -0.18
SSRP1-202ENST00000293880 LRRC75BQ2VPJ9 315 aa13.94□□□□□ -0.18
SSRP1-202ENST00000293880 SNAI3Q3KNW1 292 aa13.94□□□□□ -0.18
SSRP1-202ENST00000293880 OR10J6PQ8NGY7 276 aa13.94□□□□□ -0.18
SSRP1-202ENST00000293880 MRAP2Q96G30 205 aa13.94□□□□□ -0.18
SSRP1-202ENST00000293880 PGPA6NDG6 321 aa13.94□□□□□ -0.18
SSRP1-202ENST00000293880 HOXD4P09016 255 aaPredicted RBP13.94□□□□□ -0.18
SSRP1-202ENST00000293880 ERGP11308 486 aa13.94□□□□□ -0.18
SSRP1-202ENST00000293880 RSPO4Q2I0M5 234 aaPredicted RBP13.94□□□□□ -0.18
SSRP1-202ENST00000293880 MEIG1Q5JSS6 88 aa13.94□□□□□ -0.18
SSRP1-202ENST00000293880 STRCP1A6NGW2 1772 aa13.94□□□□□ -0.18
SSRP1-202ENST00000293880 TRAV12-3A0A0B4J271 114 aa13.94□□□□□ -0.18
SSRP1-202ENST00000293880 IGKV3-20P01619 116 aa13.94□□□□□ -0.18
SSRP1-202ENST00000293880 RRN3P1Q2M238 152 aa13.94□□□□□ -0.18
SSRP1-202ENST00000293880 FAM74A4Q5TZK3 123 aa13.94□□□□□ -0.18
SSRP1-202ENST00000293880 SELENOHQ8IZQ5 122 aaKnown RBP13.94□□□□□ -0.18
SSRP1-202ENST00000293880 C1QTNF9BB2RNN3 333 aa13.93□□□□□ -0.18
SSRP1-202ENST00000293880 ZNF714Q96N38 554 aa13.93□□□□□ -0.18
SSRP1-202ENST00000293880 SF3B5Q9BWJ5 86 aaKnown RBP13.93□□□□□ -0.18
SSRP1-202ENST00000293880 TMEM160Q9NX00 188 aa13.93□□□□□ -0.18
SSRP1-202ENST00000293880 RECKO95980 971 aa13.93□□□□□ -0.18
SSRP1-202ENST00000293880 LINC00869P0C866 280 aa13.93□□□□□ -0.18
SSRP1-202ENST00000293880 TMEM177Q53S58 311 aa13.93□□□□□ -0.18
SSRP1-202ENST00000293880 H1FOOQ8IZA3 346 aaPredicted RBP13.93□□□□□ -0.18
SSRP1-202ENST00000293880 FNDC4Q9H6D8 234 aaPredicted RBP13.93□□□□□ -0.18
SSRP1-202ENST00000293880 PGPEP1Q9NXJ5 209 aa13.93□□□□□ -0.18
SSRP1-202ENST00000293880 FHITP49789 147 aa13.93□□□□□ -0.18
SSRP1-202ENST00000293880 AMELYQ99218 206 aa13.93□□□□□ -0.18
SSRP1-202ENST00000293880 A6NNC1 897 aa13.93□□□□□ -0.18
SSRP1-202ENST00000293880 CD160O95971 181 aa13.93□□□□□ -0.18
SSRP1-202ENST00000293880 CFDP00746 253 aaPredicted RBP13.93□□□□□ -0.18
SSRP1-202ENST00000293880 GZMHP20718 246 aa13.93□□□□□ -0.18
SSRP1-202ENST00000293880 PMCHL1Q16048 86 aa13.93□□□□□ -0.18
SSRP1-202ENST00000293880 PRSS53Q2L4Q9 553 aa13.93□□□□□ -0.18
SSRP1-202ENST00000293880 WFDC6Q9BQY6 131 aa13.93□□□□□ -0.18
SSRP1-202ENST00000293880 PEF1Q9UBV8 284 aaKnown RBP13.93□□□□□ -0.18
SSRP1-202ENST00000293880 MUC21A0A0G2JKD1 596 aa13.93□□□□□ -0.18
SSRP1-202ENST00000293880 MUC21A0A140T8X8 626 aa13.93□□□□□ -0.18
SSRP1-202ENST00000293880 PSG4Q00888 419 aa13.93□□□□□ -0.18
SSRP1-202ENST00000293880 MUC21Q5SSG8 566 aa13.93□□□□□ -0.18
SSRP1-202ENST00000293880 PEAR1Q5VY43 1037 aaPredicted RBP13.93□□□□□ -0.18
SSRP1-202ENST00000293880 ZNF660Q6AZW8 331 aaPredicted RBP13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms