RNA–Protein interactions for RNA: ENST00000267996.11

TPM1-201, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,670 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-201ENST00000267996 LEAP2Q969E1 77 aa13.45□□□□□ -0.26
TPM1-201ENST00000267996 ZFP57Q9NU63 452 aa13.45□□□□□ -0.26
TPM1-201ENST00000267996 YLPM1P49750 1951 aaKnown RBP13.44□□□□□ -0.26
TPM1-201ENST00000267996 LINC00473A8K010 186 aa13.44□□□□□ -0.26
TPM1-201ENST00000267996 DEDDO75618 318 aa13.44□□□□□ -0.26
TPM1-201ENST00000267996 DUTP33316 252 aaKnown RBP13.44□□□□□ -0.26
TPM1-201ENST00000267996 EFNA4P52798 201 aa13.44□□□□□ -0.26
TPM1-201ENST00000267996 BTNL3Q6UXE8 466 aa13.44□□□□□ -0.26
TPM1-201ENST00000267996 SLC25A48Q6ZT89 311 aaKnown RBP13.44□□□□□ -0.26
TPM1-201ENST00000267996 ODF3L1Q8IXM7 274 aa13.44□□□□□ -0.26
TPM1-201ENST00000267996 DCUN1D4Q92564 292 aa13.44□□□□□ -0.26
TPM1-201ENST00000267996 RRNAD1Q96FB5 475 aaKnown RBP13.44□□□□□ -0.26
TPM1-201ENST00000267996 NEIL1Q96FI4 390 aaPredicted RBP13.44□□□□□ -0.26
TPM1-201ENST00000267996 ARL6Q9H0F7 186 aa13.44□□□□□ -0.26
TPM1-201ENST00000267996 PAIP2BQ9ULR5 123 aaKnown RBP13.44□□□□□ -0.26
TPM1-201ENST00000267996 DOCK11Q5JSL3 2073 aa13.44□□□□□ -0.26
TPM1-201ENST00000267996 UBR5O95071 2799 aaPredicted RBP13.44□□□□□ -0.26
TPM1-201ENST00000267996 A0A0G2JRQ6 117 aa13.44□□□□□ -0.26
TPM1-201ENST00000267996 C17orf98A8MV24 154 aa13.44□□□□□ -0.26
TPM1-201ENST00000267996 K7EPK0 472 aa13.44□□□□□ -0.26
TPM1-201ENST00000267996 TSC22D2O75157 780 aa13.44□□□□□ -0.26
TPM1-201ENST00000267996 IGKV1-5P01602 117 aa13.44□□□□□ -0.26
TPM1-201ENST00000267996 IGHV3-7P01780 117 aa13.44□□□□□ -0.26
TPM1-201ENST00000267996 LPAR6P43657 344 aa13.44□□□□□ -0.26
TPM1-201ENST00000267996 S100A10P60903 97 aa13.44□□□□□ -0.26
TPM1-201ENST00000267996 FAM219AQ8IW50 185 aa13.44□□□□□ -0.26
TPM1-201ENST00000267996 FAM71E2Q8N5Q1 922 aa13.44□□□□□ -0.26
TPM1-201ENST00000267996 INO80EQ8NBZ0 244 aaPredicted RBP13.44□□□□□ -0.26
TPM1-201ENST00000267996 C8orf46Q8TAG6 207 aa13.44□□□□□ -0.26
TPM1-201ENST00000267996 TCTEX1D2Q8WW35 142 aa13.44□□□□□ -0.26
TPM1-201ENST00000267996 GPR146Q96CH1 333 aa13.44□□□□□ -0.26
TPM1-201ENST00000267996 ZNF251Q9BRH9 671 aa13.44□□□□□ -0.26
TPM1-201ENST00000267996 DCHS2Q6V1P9 2916 aa13.43□□□□□ -0.26
TPM1-201ENST00000267996 A0A1B0GU03 582 aa13.43□□□□□ -0.26
TPM1-201ENST00000267996 F5H0A9 414 aaPredicted RBP13.43□□□□□ -0.26
TPM1-201ENST00000267996 RAMP3O60896 148 aa13.43□□□□□ -0.26
TPM1-201ENST00000267996 NDUFS7O75251 213 aa13.43□□□□□ -0.26
TPM1-201ENST00000267996 PITX3O75364 302 aa13.43□□□□□ -0.26
TPM1-201ENST00000267996 ERVFRD-1P60508 538 aa13.43□□□□□ -0.26
TPM1-201ENST00000267996 WDR25Q64LD2 544 aaPredicted RBP13.43□□□□□ -0.26
TPM1-201ENST00000267996 NCR3LG1Q68D85 454 aa13.43□□□□□ -0.26
TPM1-201ENST00000267996 C1orf229Q6ZS94 237 aaPredicted RBP13.43□□□□□ -0.26
TPM1-201ENST00000267996 SPAG16Q8N0X2 631 aa13.43□□□□□ -0.26
TPM1-201ENST00000267996 C11orf42Q8N5U0 333 aa13.43□□□□□ -0.26
TPM1-201ENST00000267996 C8orf31Q8N9H6 132 aa13.43□□□□□ -0.26
TPM1-201ENST00000267996 OR8B3Q8NGG8 313 aa13.43□□□□□ -0.26
TPM1-201ENST00000267996 ZNF596Q8TC21 504 aa13.43□□□□□ -0.26
TPM1-201ENST00000267996 AQP10Q96PS8 301 aa13.43□□□□□ -0.26
TPM1-201ENST00000267996 OR8B2Q96RD0 313 aa13.43□□□□□ -0.26
TPM1-201ENST00000267996 POMT1Q9Y6A1 747 aa13.43□□□□□ -0.26
TPM1-201ENST00000267996 COL12A1Q99715 3063 aa13.42□□□□□ -0.26
TPM1-201ENST00000267996 A0A087X0M5 115 aa13.42□□□□□ -0.26
TPM1-201ENST00000267996 A0A1B0GX30 115 aa13.42□□□□□ -0.26
TPM1-201ENST00000267996 A0A1W2PPE3 182 aa13.42□□□□□ -0.26
TPM1-201ENST00000267996 M0R1X1 148 aa13.42□□□□□ -0.26
TPM1-201ENST00000267996 RAB29O14966 203 aa13.42□□□□□ -0.26
TPM1-201ENST00000267996 ST8SIA3O43173 380 aa13.42□□□□□ -0.26
TPM1-201ENST00000267996 RLN2P04090 185 aa13.42□□□□□ -0.26
TPM1-201ENST00000267996 P0C879 139 aa13.42□□□□□ -0.26
TPM1-201ENST00000267996 ID3Q02535 119 aa13.42□□□□□ -0.26
TPM1-201ENST00000267996 SMCO1Q147U7 214 aa13.42□□□□□ -0.26
TPM1-201ENST00000267996 RPL39P5Q59GN2 51 aa13.42□□□□□ -0.26
TPM1-201ENST00000267996 THOC7Q6I9Y2 204 aaKnown RBP13.42□□□□□ -0.26
TPM1-201ENST00000267996 TEX261Q6UWH6 196 aa13.42□□□□□ -0.26
TPM1-201ENST00000267996 ZNF767PQ75MW2 155 aa13.42□□□□□ -0.26
TPM1-201ENST00000267996 CD300LFQ8TDQ1 290 aa13.42□□□□□ -0.26
TPM1-201ENST00000267996 RAB39BQ96DA2 213 aa13.42□□□□□ -0.26
TPM1-201ENST00000267996 C11orf1Q9H5F2 150 aa13.42□□□□□ -0.26
TPM1-201ENST00000267996 PATZ1Q9HBE1 687 aaKnown RBP13.42□□□□□ -0.26
TPM1-201ENST00000267996 U3KQ87 197 aa13.42□□□□□ -0.26
TPM1-201ENST00000267996 SAA2-SAA4A0A096LPE2 208 aa13.41□□□□□ -0.26
TPM1-201ENST00000267996 SAA2P0DJI9 122 aaPredicted RBP13.41□□□□□ -0.26
TPM1-201ENST00000267996 AP2S1P53680 142 aaPredicted RBP13.41□□□□□ -0.26
TPM1-201ENST00000267996 LINC00205P59089 165 aa13.41□□□□□ -0.26
TPM1-201ENST00000267996 Q6ZRM9 215 aa13.41□□□□□ -0.26
TPM1-201ENST00000267996 LINC00311Q8N616 119 aa13.41□□□□□ -0.26
TPM1-201ENST00000267996 LY6G5BQ8NDX9 201 aa13.41□□□□□ -0.26
TPM1-201ENST00000267996 DDB2Q92466 427 aa13.41□□□□□ -0.26
TPM1-201ENST00000267996 LSM5Q9Y4Y9 91 aaKnown RBP13.41□□□□□ -0.26
TPM1-201ENST00000267996 KMT2BQ9UMN6 2715 aaPredicted RBP13.41□□□□□ -0.26
TPM1-201ENST00000267996 MSGN1A6NI15 193 aa13.4□□□□□ -0.26
TPM1-201ENST00000267996 E5RGE8 158 aa13.4□□□□□ -0.26
TPM1-201ENST00000267996 RBFOX2O43251 390 aaKnown RBP eCLIP13.4□□□□□ -0.26
TPM1-201ENST00000267996 KCNAB3O43448 404 aa13.4□□□□□ -0.26
TPM1-201ENST00000267996 SCGB1D2O95969 90 aa13.4□□□□□ -0.26
TPM1-201ENST00000267996 RBP4P02753 201 aa13.4□□□□□ -0.26
TPM1-201ENST00000267996 NKX2-1P43699 371 aaPredicted RBP13.4□□□□□ -0.26
TPM1-201ENST00000267996 GNG10P50151 68 aa13.4□□□□□ -0.26
TPM1-201ENST00000267996 FOXRED2Q8IWF2 684 aa13.4□□□□□ -0.26
TPM1-201ENST00000267996 ZNF680Q8NEM1 530 aa13.4□□□□□ -0.26
TPM1-201ENST00000267996 DMBX1Q8NFW5 382 aa13.4□□□□□ -0.26
TPM1-201ENST00000267996 OR8H1Q8NGG4 311 aa13.4□□□□□ -0.26
TPM1-201ENST00000267996 RCL1Q9Y2P8 373 aaKnown RBP13.4□□□□□ -0.26
TPM1-201ENST00000267996 NSG2Q9Y328 171 aa13.4□□□□□ -0.26
TPM1-201ENST00000267996 MMP24Q9Y5R2 645 aa13.4□□□□□ -0.26
TPM1-201ENST00000267996 AKAP6Q13023 2319 aa13.4□□□□□ -0.26
TPM1-201ENST00000267996 KIAA1324LA8MWY0 1029 aaPredicted RBP13.4□□□□□ -0.26
TPM1-201ENST00000267996 BCL2L11O43521 198 aa13.4□□□□□ -0.26
TPM1-201ENST00000267996 S1PR2O95136 353 aa13.4□□□□□ -0.26
TPM1-201ENST00000267996 IGHV1-8P0DP01 117 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms