RNA–Protein interactions for RNA: ENST00000225726.9

CCDC47-201, Transcript of coiled-coil domain containing 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC47, Length 3,466 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-201ENST00000225726 CBLN4Q9NTU7 201 aa12.32□□□□□ -0.44
CCDC47-201ENST00000225726 hADV38S2A0JD32 116 aa12.32□□□□□ -0.44
CCDC47-201ENST00000225726 ITGB1BP1O14713 200 aa12.32□□□□□ -0.44
CCDC47-201ENST00000225726 ST8SIA5O15466 376 aa12.32□□□□□ -0.44
CCDC47-201ENST00000225726 KCNAB3O43448 404 aa12.32□□□□□ -0.44
CCDC47-201ENST00000225726 ZNF16P17020 682 aaPredicted RBP12.32□□□□□ -0.44
CCDC47-201ENST00000225726 CATR1Q13166 79 aa12.32□□□□□ -0.44
CCDC47-201ENST00000225726 ABHD14BQ96IU4 210 aa12.32□□□□□ -0.44
CCDC47-201ENST00000225726 AGMATQ9BSE5 352 aa12.32□□□□□ -0.44
CCDC47-201ENST00000225726 POMT1Q9Y6A1 747 aa12.32□□□□□ -0.44
CCDC47-201ENST00000225726 LINC00312Q9Y6C7 94 aa12.32□□□□□ -0.44
CCDC47-201ENST00000225726 NDUFA2O43678 99 aa12.31□□□□□ -0.44
CCDC47-201ENST00000225726 ZNF66Q6ZN08 573 aa12.31□□□□□ -0.44
CCDC47-201ENST00000225726 GFOD1Q9NXC2 390 aa12.31□□□□□ -0.44
CCDC47-201ENST00000225726 KAAG1Q9UBP8 84 aa12.31□□□□□ -0.44
CCDC47-201ENST00000225726 NBEAQ8NFP9 2946 aa12.31□□□□□ -0.44
CCDC47-201ENST00000225726 ST8SIA3O43173 380 aa12.31□□□□□ -0.44
CCDC47-201ENST00000225726 SLC25A6P12236 298 aa12.31□□□□□ -0.44
CCDC47-201ENST00000225726 ZNF585BQ52M93 769 aa12.31□□□□□ -0.44
CCDC47-201ENST00000225726 FGFRL1Q8N441 504 aa12.31□□□□□ -0.44
CCDC47-201ENST00000225726 TCTEX1D1Q8N7M0 179 aa12.31□□□□□ -0.44
CCDC47-201ENST00000225726 LSM10Q969L4 123 aaKnown RBP12.31□□□□□ -0.44
CCDC47-201ENST00000225726 SDHAF2Q9NX18 166 aa12.31□□□□□ -0.44
CCDC47-201ENST00000225726 TAS2R3Q9NYW6 316 aa12.31□□□□□ -0.44
CCDC47-201ENST00000225726 IDI2-AS1Q9NZ38 188 aa12.31□□□□□ -0.44
CCDC47-201ENST00000225726 DIDO1Q9BTC0 2240 aaKnown RBP12.31□□□□□ -0.44
CCDC47-201ENST00000225726 E5RGE8 158 aa12.31□□□□□ -0.44
CCDC47-201ENST00000225726 NDUFB3O43676 98 aa12.31□□□□□ -0.44
CCDC47-201ENST00000225726 IGKV1-39P01597 117 aa12.31□□□□□ -0.44
CCDC47-201ENST00000225726 IGKV1D-39P04432 117 aa12.31□□□□□ -0.44
CCDC47-201ENST00000225726 C11orf71Q6IPW1 123 aa12.31□□□□□ -0.44
CCDC47-201ENST00000225726 FAM212BQ9NTI7 297 aaPredicted RBP12.31□□□□□ -0.44
CCDC47-201ENST00000225726 NSG2Q9Y328 171 aa12.31□□□□□ -0.44
CCDC47-201ENST00000225726 MSGN1A6NI15 193 aa12.3□□□□□ -0.44
CCDC47-201ENST00000225726 H7C2Y5 167 aa12.3□□□□□ -0.44
CCDC47-201ENST00000225726 FSTL3O95633 263 aa12.3□□□□□ -0.44
CCDC47-201ENST00000225726 LRRC10Q5BKY1 277 aa12.3□□□□□ -0.44
CCDC47-201ENST00000225726 RBMS3Q6XE24 437 aaKnown RBP12.3□□□□□ -0.44
CCDC47-201ENST00000225726 PLEKHA2Q9HB19 425 aa12.3□□□□□ -0.44
CCDC47-201ENST00000225726 LPAR3Q9UBY5 353 aa12.3□□□□□ -0.44
CCDC47-201ENST00000225726 OMGP23515 440 aa12.3□□□□□ -0.44
CCDC47-201ENST00000225726 GPR12P47775 334 aa12.3□□□□□ -0.44
CCDC47-201ENST00000225726 LYPD2Q6UXB3 125 aa12.3□□□□□ -0.44
CCDC47-201ENST00000225726 HSD17B10Q99714 261 aaKnown RBP12.3□□□□□ -0.44
CCDC47-201ENST00000225726 RAB1BQ9H0U4 201 aa12.3□□□□□ -0.44
CCDC47-201ENST00000225726 PFDN2Q9UHV9 154 aa12.3□□□□□ -0.44
CCDC47-201ENST00000225726 PRELID3BQ9Y3B1 194 aa12.3□□□□□ -0.44
CCDC47-201ENST00000225726 ANKHD1Q8IWZ3 2542 aaKnown RBP12.3□□□□□ -0.44
CCDC47-201ENST00000225726 A0A1B0GU03 582 aa12.3□□□□□ -0.44
CCDC47-201ENST00000225726 HKR1P10072 659 aa12.3□□□□□ -0.44
CCDC47-201ENST00000225726 RAB7AP51149 207 aa12.3□□□□□ -0.44
CCDC47-201ENST00000225726 Q3ZCU0 254 aa12.3□□□□□ -0.44
CCDC47-201ENST00000225726 GPR146Q96CH1 333 aa12.3□□□□□ -0.44
CCDC47-201ENST00000225726 RCL1Q9Y2P8 373 aaKnown RBP12.3□□□□□ -0.44
CCDC47-201ENST00000225726 SPDEFO95238 335 aa12.29□□□□□ -0.44
CCDC47-201ENST00000225726 NKX2-1P43699 371 aaPredicted RBP12.29□□□□□ -0.44
CCDC47-201ENST00000225726 RPL30P62888 115 aaKnown RBP12.29□□□□□ -0.44
CCDC47-201ENST00000225726 BTNL3Q6UXE8 466 aa12.29□□□□□ -0.44
CCDC47-201ENST00000225726 OR10A7Q8NGE5 316 aa12.29□□□□□ -0.44
CCDC47-201ENST00000225726 SCARB1Q8WTV0 552 aa12.29□□□□□ -0.44
CCDC47-201ENST00000225726 TCTEX1D2Q8WW35 142 aa12.29□□□□□ -0.44
CCDC47-201ENST00000225726 ZNF471Q9BX82 626 aaPredicted RBP12.29□□□□□ -0.44
CCDC47-201ENST00000225726 GAL3ST2Q9H3Q3 398 aa12.29□□□□□ -0.44
CCDC47-201ENST00000225726 F5H0A9 414 aaPredicted RBP12.29□□□□□ -0.44
CCDC47-201ENST00000225726 FCN3O75636 299 aa12.29□□□□□ -0.44
CCDC47-201ENST00000225726 CLDN1O95832 211 aa12.29□□□□□ -0.44
CCDC47-201ENST00000225726 COL8A2P25067 703 aa12.29□□□□□ -0.44
CCDC47-201ENST00000225726 RPL12P30050 165 aaKnown RBP12.29□□□□□ -0.44
CCDC47-201ENST00000225726 LPAR6P43657 344 aa12.29□□□□□ -0.44
CCDC47-201ENST00000225726 RPL31P62899 125 aaKnown RBP12.29□□□□□ -0.44
CCDC47-201ENST00000225726 RNASE11Q8TAA1 199 aaKnown RBP12.29□□□□□ -0.44
CCDC47-201ENST00000225726 C19orf12Q9NSK7 152 aa12.29□□□□□ -0.44
CCDC47-201ENST00000225726 CLLU1Q5K131 121 aa12.28□□□□□ -0.44
CCDC47-201ENST00000225726 IFI27L2Q9H2X8 130 aa12.28□□□□□ -0.44
CCDC47-201ENST00000225726 CTSZQ9UBR2 303 aa12.28□□□□□ -0.44
CCDC47-201ENST00000225726 GAB2Q9UQC2 676 aa12.28□□□□□ -0.44
CCDC47-201ENST00000225726 SESN1Q9Y6P5 492 aa12.28□□□□□ -0.44
CCDC47-201ENST00000225726 ADGRG4Q8IZF6 3080 aa12.28□□□□□ -0.44
CCDC47-201ENST00000225726 A0A0G2JRQ6 117 aa12.28□□□□□ -0.44
CCDC47-201ENST00000225726 P2RY1P47900 373 aa12.28□□□□□ -0.44
CCDC47-201ENST00000225726 MEOX2P50222 304 aa12.28□□□□□ -0.44
CCDC47-201ENST00000225726 DTX2Q86UW9 622 aa12.28□□□□□ -0.44
CCDC47-201ENST00000225726 LURAP1LQ8IV03 231 aa12.28□□□□□ -0.44
CCDC47-201ENST00000225726 ABHD14AQ9BUJ0 271 aa12.28□□□□□ -0.44
CCDC47-201ENST00000225726 IGKV1-5P01602 117 aa12.28□□□□□ -0.44
CCDC47-201ENST00000225726 ROS1P08922 2347 aa12.27□□□□□ -0.44
CCDC47-201ENST00000225726 A0A1B0GV90 55 aa12.27□□□□□ -0.44
CCDC47-201ENST00000225726 DVL1O14640 695 aa12.27□□□□□ -0.44
CCDC47-201ENST00000225726 PITX3O75364 302 aa12.27□□□□□ -0.44
CCDC47-201ENST00000225726 ZNF134P52741 427 aa12.27□□□□□ -0.44
CCDC47-201ENST00000225726 DMBX1Q8NFW5 382 aa12.27□□□□□ -0.44
CCDC47-201ENST00000225726 STOML3Q8TAV4 291 aa12.27□□□□□ -0.44
CCDC47-201ENST00000225726 C11orf1Q9H5F2 150 aa12.27□□□□□ -0.44
CCDC47-201ENST00000225726 UNKLQ9H9P5 680 aaKnown RBP12.27□□□□□ -0.44
CCDC47-201ENST00000225726 RPUSD1Q9UJJ7 312 aaKnown RBP12.27□□□□□ -0.44
CCDC47-201ENST00000225726 HIVEP3Q5T1R4 2406 aa12.27□□□□□ -0.44
CCDC47-201ENST00000225726 RPS10-NUDT3A0A1W2PQS6 291 aa12.27□□□□□ -0.45
CCDC47-201ENST00000225726 LYNX1G3V0Z9 82 aa12.27□□□□□ -0.45
CCDC47-201ENST00000225726 TAAR5O14804 337 aa12.27□□□□□ -0.45
CCDC47-201ENST00000225726 IGHV2-70P01814 119 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms