RNA–Protein interactions for RNA: ENSMUST00000061628.6

Pcdh20-201, Transcript of Protocadherin-20, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdh20, Length 5,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh20-201ENSMUST00000061628 Q9D4G1 230 aa13.11□□□□□ -0.31
Pcdh20-201ENSMUST00000061628 RangrfQ9JIB0 185 aa13.11□□□□□ -0.31
Pcdh20-201ENSMUST00000061628 Plp2Q9R1Q7 152 aa13.11□□□□□ -0.31
Pcdh20-201ENSMUST00000061628 Cldn13Q9Z0S4 211 aa13.11□□□□□ -0.31
Pcdh20-201ENSMUST00000061628 Gm10036E9PYL9 178 aaKnown RBP13.1□□□□□ -0.31
Pcdh20-201ENSMUST00000061628 Fut9O88819 359 aa13.1□□□□□ -0.31
Pcdh20-201ENSMUST00000061628 P2ry1P49650 373 aa13.1□□□□□ -0.31
Pcdh20-201ENSMUST00000061628 Scgb2b24Q7M747 112 aa13.1□□□□□ -0.31
Pcdh20-201ENSMUST00000061628 Prss50Q8BLH5 439 aa13.1□□□□□ -0.31
Pcdh20-201ENSMUST00000061628 Tox4Q8BU11 619 aa13.1□□□□□ -0.31
Pcdh20-201ENSMUST00000061628 Srsf4Q8VE97 489 aaKnown RBP13.1□□□□□ -0.31
Pcdh20-201ENSMUST00000061628 CtsjQ9R014 334 aa13.1□□□□□ -0.31
Pcdh20-201ENSMUST00000061628 Sult2a3D3Z1W5 285 aa13.1□□□□□ -0.31
Pcdh20-201ENSMUST00000061628 Pcp2P12660 120 aa13.1□□□□□ -0.31
Pcdh20-201ENSMUST00000061628 Egfbp2P36368 261 aa13.1□□□□□ -0.31
Pcdh20-201ENSMUST00000061628 ArsgQ3TYD4 525 aa13.1□□□□□ -0.31
Pcdh20-201ENSMUST00000061628 Olfr1155Q8VFR3 314 aa13.1□□□□□ -0.31
Pcdh20-201ENSMUST00000061628 Tctex1d1Q9D5I4 173 aa13.1□□□□□ -0.31
Pcdh20-201ENSMUST00000061628 Hsd17b6Q9R092 317 aa13.1□□□□□ -0.31
Pcdh20-201ENSMUST00000061628 Il18bpQ9Z0M9 193 aa13.1□□□□□ -0.31
Pcdh20-201ENSMUST00000061628 Olfr196E9PYP4 309 aa13.1□□□□□ -0.31
Pcdh20-201ENSMUST00000061628 P01679 107 aa13.1□□□□□ -0.31
Pcdh20-201ENSMUST00000061628 Fgf7P36363 194 aa13.1□□□□□ -0.31
Pcdh20-201ENSMUST00000061628 Mcpt8P43430 247 aa13.1□□□□□ -0.31
Pcdh20-201ENSMUST00000061628 Fam57aQ5ND56 257 aa13.1□□□□□ -0.31
Pcdh20-201ENSMUST00000061628 Npy4rQ61041 375 aa13.1□□□□□ -0.31
Pcdh20-201ENSMUST00000061628 Olfr132Q7TRI8 313 aa13.1□□□□□ -0.31
Pcdh20-201ENSMUST00000061628 Scrt2Q8BTH6 311 aa13.1□□□□□ -0.31
Pcdh20-201ENSMUST00000061628 Dusp28Q8BTR5 163 aa13.1□□□□□ -0.31
Pcdh20-201ENSMUST00000061628 Mrps18cQ8R2L5 143 aaKnown RBP13.1□□□□□ -0.31
Pcdh20-201ENSMUST00000061628 Sft2d2Q8VD57 159 aa13.1□□□□□ -0.31
Pcdh20-201ENSMUST00000061628 Asb10Q91ZT7 467 aa13.1□□□□□ -0.31
Pcdh20-201ENSMUST00000061628 Nmnat3Q99JR6 245 aa13.1□□□□□ -0.31
Pcdh20-201ENSMUST00000061628 Ammecr1Q9JHT5 344 aaKnown RBP13.1□□□□□ -0.31
Pcdh20-201ENSMUST00000061628 Pla2g2fQ9QZT4 168 aa13.1□□□□□ -0.31
Pcdh20-201ENSMUST00000061628 Olfr789A0A1L1SV77 312 aa13.1□□□□□ -0.31
Pcdh20-201ENSMUST00000061628 Gm21746J3QMM6 180 aa13.1□□□□□ -0.31
Pcdh20-201ENSMUST00000061628 Adam10O35598 749 aa13.1□□□□□ -0.31
Pcdh20-201ENSMUST00000061628 Il4P07750 140 aa13.1□□□□□ -0.31
Pcdh20-201ENSMUST00000061628 Cxxc4Q6NXI8 198 aa13.1□□□□□ -0.31
Pcdh20-201ENSMUST00000061628 Ankrd34cQ8BLB8 534 aa13.1□□□□□ -0.31
Pcdh20-201ENSMUST00000061628 9030612E09RikQ8CE20 140 aa13.1□□□□□ -0.31
Pcdh20-201ENSMUST00000061628 Olfr1102Q8VES2 324 aa13.1□□□□□ -0.31
Pcdh20-201ENSMUST00000061628 Olfr362Q8VGV7 317 aa13.1□□□□□ -0.31
Pcdh20-201ENSMUST00000061628 Glipr1Q9CWG1 255 aa13.1□□□□□ -0.31
Pcdh20-201ENSMUST00000061628 Marveld3Q9D956 376 aa13.1□□□□□ -0.31
Pcdh20-201ENSMUST00000061628 Olfr154Q9QY00 318 aa13.1□□□□□ -0.31
Pcdh20-201ENSMUST00000061628 Numa1E9Q7G0 2094 aaKnown RBP13.1□□□□□ -0.31
Pcdh20-201ENSMUST00000061628 Arfgef1G3X9K3 1846 aaKnown RBP13.09□□□□□ -0.31
Pcdh20-201ENSMUST00000061628 PrnA0A075B668 197 aa13.09□□□□□ -0.31
Pcdh20-201ENSMUST00000061628 Mn1D3YWE6 1297 aa13.09□□□□□ -0.31
Pcdh20-201ENSMUST00000061628 Ccl4P14097 92 aa13.09□□□□□ -0.31
Pcdh20-201ENSMUST00000061628 Ca10P61215 328 aa13.09□□□□□ -0.31
Pcdh20-201ENSMUST00000061628 Parp16Q7TMM8 322 aa13.09□□□□□ -0.31
Pcdh20-201ENSMUST00000061628 Ifna12Q80SS5 189 aa13.09□□□□□ -0.31
Pcdh20-201ENSMUST00000061628 Ifna14Q810G3 189 aa13.09□□□□□ -0.31
Pcdh20-201ENSMUST00000061628 Cd99l2Q8BIF0 237 aa13.09□□□□□ -0.31
Pcdh20-201ENSMUST00000061628 Nit1Q8VDK1 323 aa13.09□□□□□ -0.31
Pcdh20-201ENSMUST00000061628 Tm7sf3Q9CRG1 565 aa13.09□□□□□ -0.31
Pcdh20-201ENSMUST00000061628 PrndQ9QUG3 179 aa13.09□□□□□ -0.31
Pcdh20-201ENSMUST00000061628 Igkv1-135A0A0B4J1H7 120 aa13.09□□□□□ -0.31
Pcdh20-201ENSMUST00000061628 Gm35060A0A140LIV7 231 aa13.09□□□□□ -0.31
Pcdh20-201ENSMUST00000061628 Tcstv1O70619 171 aa13.09□□□□□ -0.31
Pcdh20-201ENSMUST00000061628 Lclat1Q3UN02 376 aa13.09□□□□□ -0.31
Pcdh20-201ENSMUST00000061628 Psmb6Q60692 238 aa13.09□□□□□ -0.31
Pcdh20-201ENSMUST00000061628 Olfr901Q7TRD1 311 aa13.09□□□□□ -0.31
Pcdh20-201ENSMUST00000061628 Harbi1Q8BR93 349 aa13.09□□□□□ -0.31
Pcdh20-201ENSMUST00000061628 Olfr1184Q8VG86 311 aa13.09□□□□□ -0.31
Pcdh20-201ENSMUST00000061628 SmagpQ99KC7 97 aa13.09□□□□□ -0.31
Pcdh20-201ENSMUST00000061628 Fbp1Q9QXD6 338 aa13.09□□□□□ -0.31
Pcdh20-201ENSMUST00000061628 Scgb1b12A0A087WP21 93 aa13.09□□□□□ -0.31
Pcdh20-201ENSMUST00000061628 Foxd2O35392 492 aa13.09□□□□□ -0.31
Pcdh20-201ENSMUST00000061628 Cldn1O88551 211 aa13.09□□□□□ -0.31
Pcdh20-201ENSMUST00000061628 Zfp747Q8BHM7 422 aa13.09□□□□□ -0.31
Pcdh20-201ENSMUST00000061628 Olfr215Q8VF82 310 aa13.09□□□□□ -0.31
Pcdh20-201ENSMUST00000061628 Olfr108Q8VFA1 320 aa13.09□□□□□ -0.31
Pcdh20-201ENSMUST00000061628 Utp23Q9CX11 249 aaKnown RBP13.09□□□□□ -0.31
Pcdh20-201ENSMUST00000061628 ManfQ9CXI5 179 aaKnown RBP13.09□□□□□ -0.31
Pcdh20-201ENSMUST00000061628 Tmprss2Q9JIQ8 490 aa13.09□□□□□ -0.31
Pcdh20-201ENSMUST00000061628 Gm20918J3QN17 227 aa13.09□□□□□ -0.31
Pcdh20-201ENSMUST00000061628 Gm8653K9J7G2 307 aa13.09□□□□□ -0.31
Pcdh20-201ENSMUST00000061628 Vmn1r117L7N2C9 307 aa13.09□□□□□ -0.31
Pcdh20-201ENSMUST00000061628 Hmx3P42581 356 aa13.09□□□□□ -0.31
Pcdh20-201ENSMUST00000061628 Gm21943Q5FWD5 227 aa13.09□□□□□ -0.31
Pcdh20-201ENSMUST00000061628 LiphQ8CIV3 451 aa13.09□□□□□ -0.31
Pcdh20-201ENSMUST00000061628 Vmn1r178Q8R2B6 304 aa13.09□□□□□ -0.31
Pcdh20-201ENSMUST00000061628 Olfr1242Q8VGM6 306 aa13.09□□□□□ -0.31
Pcdh20-201ENSMUST00000061628 Stard4Q99JV5 224 aa13.09□□□□□ -0.31
Pcdh20-201ENSMUST00000061628 Tnk1Q99ML2 666 aa13.09□□□□□ -0.31
Pcdh20-201ENSMUST00000061628 Syt11Q9R0N3 430 aa13.09□□□□□ -0.31
Pcdh20-201ENSMUST00000061628 Adam11Q9R1V4 773 aa13.09□□□□□ -0.31
Pcdh20-201ENSMUST00000061628 Trav15d-2-dv6d-2A0A0G2JGQ7 117 aa13.08□□□□□ -0.31
Pcdh20-201ENSMUST00000061628 Igk-V19-17P01633 149 aa13.08□□□□□ -0.31
Pcdh20-201ENSMUST00000061628 Gcm1P70348 436 aa13.08□□□□□ -0.31
Pcdh20-201ENSMUST00000061628 Cd55bQ61476 407 aa13.08□□□□□ -0.31
Pcdh20-201ENSMUST00000061628 Lrfn3Q8BLY3 626 aa13.08□□□□□ -0.31
Pcdh20-201ENSMUST00000061628 Gm14597A2CFG5 200 aa13.08□□□□□ -0.32
Pcdh20-201ENSMUST00000061628 Olfr1053L7MU59 313 aa13.08□□□□□ -0.32
Pcdh20-201ENSMUST00000061628 Rom1P32958 351 aa13.08□□□□□ -0.32
Pcdh20-201ENSMUST00000061628 Fgf8P37237 268 aa13.08□□□□□ -0.32
Retrieved 100 of 22,080 RNA–protein pairs in 35.6 ms