RNA–Protein interactions for RNA: ENST00000641939.1

PHGDH-231, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 540 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-231ENST00000641939 HIST1H1DP16402 221 aaKnown RBP11.89□□□□□ -0.51
PHGDH-231ENST00000641939 GNB3P16520 340 aa11.89□□□□□ -0.51
PHGDH-231ENST00000641939 F2RL1P55085 397 aa11.89□□□□□ -0.51
PHGDH-231ENST00000641939 C10orf99Q6UWK7 81 aa11.89□□□□□ -0.51
PHGDH-231ENST00000641939 CHPT1Q8WUD6 406 aa11.89□□□□□ -0.51
PHGDH-231ENST00000641939 NOL4LQ96MY1 436 aaPredicted RBP11.89□□□□□ -0.51
PHGDH-231ENST00000641939 PARP12Q9H0J9 701 aaKnown RBP11.89□□□□□ -0.51
PHGDH-231ENST00000641939 ATG5Q9H1Y0 275 aa11.89□□□□□ -0.51
PHGDH-231ENST00000641939 ABCG5Q9H222 651 aa11.89□□□□□ -0.51
PHGDH-231ENST00000641939 GHITMQ9H3K2 345 aa11.89□□□□□ -0.51
PHGDH-231ENST00000641939 DAPK2Q9UIK4 370 aa11.89□□□□□ -0.51
PHGDH-231ENST00000641939 TSSC4Q9Y5U2 329 aaPredicted RBP11.89□□□□□ -0.51
PHGDH-231ENST00000641939 IGKV1-6A0A0C4DH72 117 aa11.88□□□□□ -0.51
PHGDH-231ENST00000641939 A0A1W2PRX2 142 aa11.88□□□□□ -0.51
PHGDH-231ENST00000641939 TNFAIP8O95379 198 aa11.88□□□□□ -0.51
PHGDH-231ENST00000641939 FCGR3AP08637 254 aa11.88□□□□□ -0.51
PHGDH-231ENST00000641939 GPR12P47775 334 aa11.88□□□□□ -0.51
PHGDH-231ENST00000641939 DEFA6Q01524 100 aa11.88□□□□□ -0.51
PHGDH-231ENST00000641939 SFXN4Q6P4A7 337 aa11.88□□□□□ -0.51
PHGDH-231ENST00000641939 FOXRED2Q8IWF2 684 aa11.88□□□□□ -0.51
PHGDH-231ENST00000641939 FAM71E2Q8N5Q1 922 aa11.88□□□□□ -0.51
PHGDH-231ENST00000641939 OR4A4PQ8NGN8 299 aa11.88□□□□□ -0.51
PHGDH-231ENST00000641939 RBMXL1Q96E39 390 aaKnown RBP11.88□□□□□ -0.51
PHGDH-231ENST00000641939 AGMATQ9BSE5 352 aa11.88□□□□□ -0.51
PHGDH-231ENST00000641939 C11orf54Q9H0W9 315 aaPredicted RBP11.88□□□□□ -0.51
PHGDH-231ENST00000641939 RNF167Q9H6Y7 350 aa11.88□□□□□ -0.51
PHGDH-231ENST00000641939 A0A087WXM4 84 aa11.87□□□□□ -0.51
PHGDH-231ENST00000641939 LINC01548A6NM66 108 aa11.87□□□□□ -0.51
PHGDH-231ENST00000641939 FABP7O15540 132 aa11.87□□□□□ -0.51
PHGDH-231ENST00000641939 KCNAB3O43448 404 aa11.87□□□□□ -0.51
PHGDH-231ENST00000641939 SNRPBP14678 240 aaKnown RBP11.87□□□□□ -0.51
PHGDH-231ENST00000641939 TALDO1P37837 337 aa11.87□□□□□ -0.51
PHGDH-231ENST00000641939 MXD1Q05195 221 aa11.87□□□□□ -0.51
PHGDH-231ENST00000641939 KIR2DS1Q14954 304 aa11.87□□□□□ -0.51
PHGDH-231ENST00000641939 ARL6IP1Q15041 203 aa11.87□□□□□ -0.51
PHGDH-231ENST00000641939 MMDQ15546 238 aa11.87□□□□□ -0.51
PHGDH-231ENST00000641939 RPL39P5Q59GN2 51 aa11.87□□□□□ -0.51
PHGDH-231ENST00000641939 ZNF329Q86UD4 541 aa11.87□□□□□ -0.51
PHGDH-231ENST00000641939 STPG2Q8N412 459 aa11.87□□□□□ -0.51
PHGDH-231ENST00000641939 TSPAN14Q8NG11 270 aa11.87□□□□□ -0.51
PHGDH-231ENST00000641939 ABHD14BQ96IU4 210 aa11.87□□□□□ -0.51
PHGDH-231ENST00000641939 ZNF251Q9BRH9 671 aa11.87□□□□□ -0.51
PHGDH-231ENST00000641939 VCX3AQ9NNX9 186 aa11.87□□□□□ -0.51
PHGDH-231ENST00000641939 LINC00527Q9UJ94 153 aa11.87□□□□□ -0.51
PHGDH-231ENST00000641939 AP4M1O00189 453 aa11.86□□□□□ -0.51
PHGDH-231ENST00000641939 CLEC2LP0C7M8 214 aa11.86□□□□□ -0.51
PHGDH-231ENST00000641939 SOX6P35712 828 aa11.86□□□□□ -0.51
PHGDH-231ENST00000641939 SERPINB10P48595 397 aa11.86□□□□□ -0.51
PHGDH-231ENST00000641939 ACTBP60709 375 aa11.86□□□□□ -0.51
PHGDH-231ENST00000641939 SLC35B1P78383 322 aa11.86□□□□□ -0.51
PHGDH-231ENST00000641939 ARFRP1Q13795 201 aa11.86□□□□□ -0.51
PHGDH-231ENST00000641939 TIMM50Q3ZCQ8 353 aa11.86□□□□□ -0.51
PHGDH-231ENST00000641939 KHDC1LQ5JSQ8 128 aa11.86□□□□□ -0.51
PHGDH-231ENST00000641939 LGALS14Q8TCE9 139 aa11.86□□□□□ -0.51
PHGDH-231ENST00000641939 PHF21AQ96BD5 680 aa11.86□□□□□ -0.51
PHGDH-231ENST00000641939 RITA1Q96K30 269 aa11.86□□□□□ -0.51
PHGDH-231ENST00000641939 CABLES2Q9BTV7 478 aa11.86□□□□□ -0.51
PHGDH-231ENST00000641939 CENPOQ9BU64 300 aa11.86□□□□□ -0.51
PHGDH-231ENST00000641939 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.86□□□□□ -0.51
PHGDH-231ENST00000641939 RDH8Q9NYR8 311 aa11.86□□□□□ -0.51
PHGDH-231ENST00000641939 ZNF230Q9UIE0 474 aaPredicted RBP11.86□□□□□ -0.51
PHGDH-231ENST00000641939 RNF150Q9ULK6 438 aa11.86□□□□□ -0.51
PHGDH-231ENST00000641939 PRKDCP78527 4128 aaKnown RBP11.85□□□□□ -0.51
PHGDH-231ENST00000641939 OR5H14A6NHG9 310 aa11.85□□□□□ -0.51
PHGDH-231ENST00000641939 BET1O15155 118 aa11.85□□□□□ -0.51
PHGDH-231ENST00000641939 SCGNO76038 276 aa11.85□□□□□ -0.51
PHGDH-231ENST00000641939 DIRAS3O95661 229 aa11.85□□□□□ -0.51
PHGDH-231ENST00000641939 GSTT2P0CG29 244 aa11.85□□□□□ -0.51
PHGDH-231ENST00000641939 GSTT2BP0CG30 244 aa11.85□□□□□ -0.51
PHGDH-231ENST00000641939 CT45A6P0DMU7 189 aa11.85□□□□□ -0.51
PHGDH-231ENST00000641939 CT45A5P0DMU8 189 aa11.85□□□□□ -0.51
PHGDH-231ENST00000641939 CT45A7P0DMV0 189 aa11.85□□□□□ -0.51
PHGDH-231ENST00000641939 SRSF7Q16629 238 aaKnown RBP eCLIP11.85□□□□□ -0.51
PHGDH-231ENST00000641939 CDNFQ49AH0 187 aa11.85□□□□□ -0.51
PHGDH-231ENST00000641939 IGSF11Q5DX21 431 aa11.85□□□□□ -0.51
PHGDH-231ENST00000641939 FAM131AQ6UXB0 335 aa11.85□□□□□ -0.51
PHGDH-231ENST00000641939 GLDNQ6ZMI3 551 aaPredicted RBP11.85□□□□□ -0.51
PHGDH-231ENST00000641939 Q6ZS49 121 aa11.85□□□□□ -0.51
PHGDH-231ENST00000641939 COMMD1Q8N668 190 aa11.85□□□□□ -0.51
PHGDH-231ENST00000641939 OR10J5Q8NHC4 309 aa11.85□□□□□ -0.51
PHGDH-231ENST00000641939 MAFIPQ8WZ33 124 aa11.85□□□□□ -0.51
PHGDH-231ENST00000641939 HSPB9Q9BQS6 159 aa11.85□□□□□ -0.51
PHGDH-231ENST00000641939 GON7Q9BXV9 100 aa11.85□□□□□ -0.51
PHGDH-231ENST00000641939 TOLLIPQ9H0E2 274 aa11.85□□□□□ -0.51
PHGDH-231ENST00000641939 ZNF221Q9UK13 617 aa11.85□□□□□ -0.51
PHGDH-231ENST00000641939 ELF5Q9UKW6 265 aaPredicted RBP11.85□□□□□ -0.51
PHGDH-231ENST00000641939 TRBV6-7A0A0A0MS04 114 aa11.84□□□□□ -0.51
PHGDH-231ENST00000641939 H0YJW9 148 aa11.84□□□□□ -0.51
PHGDH-231ENST00000641939 NBR2O15453 112 aa11.84□□□□□ -0.51
PHGDH-231ENST00000641939 WIPF1O43516 503 aa11.84□□□□□ -0.51
PHGDH-231ENST00000641939 RRP9O43818 475 aaKnown RBP11.84□□□□□ -0.51
PHGDH-231ENST00000641939 PF4V1P10720 104 aa11.84□□□□□ -0.51
PHGDH-231ENST00000641939 DTYMKP23919 212 aa11.84□□□□□ -0.51
PHGDH-231ENST00000641939 CNTFRP26992 372 aa11.84□□□□□ -0.51
PHGDH-231ENST00000641939 MC5RP33032 325 aa11.84□□□□□ -0.51
PHGDH-231ENST00000641939 SCAND1P57086 179 aa11.84□□□□□ -0.51
PHGDH-231ENST00000641939 IDNKQ5T6J7 187 aa11.84□□□□□ -0.51
PHGDH-231ENST00000641939 HACD4Q5VWC8 232 aa11.84□□□□□ -0.51
PHGDH-231ENST00000641939 C1QL4Q86Z23 238 aa11.84□□□□□ -0.51
PHGDH-231ENST00000641939 NPBQ8NG41 125 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 103.1 ms