RNA–Protein interactions for RNA: ENST00000636898.1

CHRNA7-221, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

TSL 5

Gene CHRNA7, Length 2,057 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-221ENST00000636898 TAF15Q92804 592 aaKnown RBP eCLIP13.51□□□□□ -0.25
CHRNA7-221ENST00000636898 OR4C12Q96R67 309 aa13.51□□□□□ -0.25
CHRNA7-221ENST00000636898 TMPRSS5Q9H3S3 457 aa13.51□□□□□ -0.25
CHRNA7-221ENST00000636898 VSIRQ9H7M9 311 aa13.51□□□□□ -0.25
CHRNA7-221ENST00000636898 ZNF665Q9H7R5 613 aa13.51□□□□□ -0.25
CHRNA7-221ENST00000636898 CELSR3Q9NYQ7 3312 aa13.51□□□□□ -0.25
CHRNA7-221ENST00000636898 ZFP92A6NM28 416 aa13.51□□□□□ -0.25
CHRNA7-221ENST00000636898 C12orf77C9JDV5 145 aa13.51□□□□□ -0.25
CHRNA7-221ENST00000636898 TNFSF10P50591 281 aa13.51□□□□□ -0.25
CHRNA7-221ENST00000636898 ERVFRD-1P60508 538 aa13.51□□□□□ -0.25
CHRNA7-221ENST00000636898 RAB11AP62491 216 aa13.51□□□□□ -0.25
CHRNA7-221ENST00000636898 SLC38A11Q08AI6 406 aa13.51□□□□□ -0.25
CHRNA7-221ENST00000636898 KIAA0141Q14154 515 aaPredicted RBP13.51□□□□□ -0.25
CHRNA7-221ENST00000636898 LCN15Q6UWW0 184 aa13.51□□□□□ -0.25
CHRNA7-221ENST00000636898 FAM214BQ7L5A3 538 aa13.51□□□□□ -0.25
CHRNA7-221ENST00000636898 TCTEX1D1Q8N7M0 179 aa13.51□□□□□ -0.25
CHRNA7-221ENST00000636898 CA5BP1Q8WTZ4 195 aa13.51□□□□□ -0.25
CHRNA7-221ENST00000636898 VAX2Q9UIW0 290 aa13.51□□□□□ -0.25
CHRNA7-221ENST00000636898 GPR179Q6PRD1 2367 aa13.5□□□□□ -0.25
CHRNA7-221ENST00000636898 CLN5O75503 358 aa13.5□□□□□ -0.25
CHRNA7-221ENST00000636898 LYZL6O75951 148 aa13.5□□□□□ -0.25
CHRNA7-221ENST00000636898 IFNA1P01562 189 aa13.5□□□□□ -0.25
CHRNA7-221ENST00000636898 IGHG3P01860 377 aa13.5□□□□□ -0.25
CHRNA7-221ENST00000636898 TUBG1P23258 451 aa13.5□□□□□ -0.25
CHRNA7-221ENST00000636898 CATR1Q13166 79 aa13.5□□□□□ -0.25
CHRNA7-221ENST00000636898 GUSBP1Q15486 140 aa13.5□□□□□ -0.25
CHRNA7-221ENST00000636898 OR13D1Q8NGV5 346 aa13.5□□□□□ -0.25
CHRNA7-221ENST00000636898 OR1L1Q8NH94 360 aa13.5□□□□□ -0.25
CHRNA7-221ENST00000636898 PRR7Q8TB68 274 aa13.5□□□□□ -0.25
CHRNA7-221ENST00000636898 RBKSQ9H477 322 aa13.5□□□□□ -0.25
CHRNA7-221ENST00000636898 TUBG2Q9NRH3 451 aa13.5□□□□□ -0.25
CHRNA7-221ENST00000636898 IGKV3-15P01624 115 aa13.49□□□□□ -0.25
CHRNA7-221ENST00000636898 CXCL1P09341 107 aa13.49□□□□□ -0.25
CHRNA7-221ENST00000636898 HOXA5P20719 270 aa13.49□□□□□ -0.25
CHRNA7-221ENST00000636898 IL2RGP31785 369 aa13.49□□□□□ -0.25
CHRNA7-221ENST00000636898 OR3A1P47881 315 aa13.49□□□□□ -0.25
CHRNA7-221ENST00000636898 ATP6V1FQ16864 119 aa13.49□□□□□ -0.25
CHRNA7-221ENST00000636898 ATP1A1-AS1Q5TC04 95 aa13.49□□□□□ -0.25
CHRNA7-221ENST00000636898 ZNF343Q6P1L6 599 aa13.49□□□□□ -0.25
CHRNA7-221ENST00000636898 OR2D2Q9H210 308 aa13.49□□□□□ -0.25
CHRNA7-221ENST00000636898 OBP2BQ9NPH6 170 aa13.49□□□□□ -0.25
CHRNA7-221ENST00000636898 MAP1LC3B2A6NCE7 125 aa13.49□□□□□ -0.25
CHRNA7-221ENST00000636898 ZNF891A8MT65 544 aaPredicted RBP13.49□□□□□ -0.25
CHRNA7-221ENST00000636898 MLNRO43193 412 aa13.49□□□□□ -0.25
CHRNA7-221ENST00000636898 RAMP3O60896 148 aa13.49□□□□□ -0.25
CHRNA7-221ENST00000636898 CLDN1O95832 211 aa13.49□□□□□ -0.25
CHRNA7-221ENST00000636898 MPV17P39210 176 aa13.49□□□□□ -0.25
CHRNA7-221ENST00000636898 RND2P52198 227 aa13.49□□□□□ -0.25
CHRNA7-221ENST00000636898 SSX7Q7RTT5 188 aa13.49□□□□□ -0.25
CHRNA7-221ENST00000636898 C11orf53Q8IXP5 236 aa13.49□□□□□ -0.25
CHRNA7-221ENST00000636898 ZNF610Q8N9Z0 462 aa13.49□□□□□ -0.25
CHRNA7-221ENST00000636898 C1orf162Q8NEQ5 155 aaPredicted RBP13.49□□□□□ -0.25
CHRNA7-221ENST00000636898 MAP1LC3BQ9GZQ8 125 aa13.49□□□□□ -0.25
CHRNA7-221ENST00000636898 CXXC4Q9H2H0 198 aa13.49□□□□□ -0.25
CHRNA7-221ENST00000636898 NIT2Q9NQR4 276 aa13.49□□□□□ -0.25
CHRNA7-221ENST00000636898 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.49□□□□□ -0.25
CHRNA7-221ENST00000636898 TINAGQ9UJW2 476 aa13.49□□□□□ -0.25
CHRNA7-221ENST00000636898 KIAA2026Q5HYC2 2103 aa13.48□□□□□ -0.25
CHRNA7-221ENST00000636898 UBE2L5PA0A1B0GUS4 154 aa13.48□□□□□ -0.25
CHRNA7-221ENST00000636898 LRRC30A6NM36 301 aa13.48□□□□□ -0.25
CHRNA7-221ENST00000636898 M0R296 226 aa13.48□□□□□ -0.25
CHRNA7-221ENST00000636898 CYB5R3P00387 301 aaPredicted RBP13.48□□□□□ -0.25
CHRNA7-221ENST00000636898 HBZP02008 142 aa13.48□□□□□ -0.25
CHRNA7-221ENST00000636898 FABP1P07148 127 aa13.48□□□□□ -0.25
CHRNA7-221ENST00000636898 CEBPDP49716 269 aaPredicted RBP13.48□□□□□ -0.25
CHRNA7-221ENST00000636898 NINJ1Q92982 152 aa13.48□□□□□ -0.25
CHRNA7-221ENST00000636898 LAMP3Q9UQV4 416 aa13.48□□□□□ -0.25
CHRNA7-221ENST00000636898 IFNL4K9M1U5 179 aa13.48□□□□□ -0.25
CHRNA7-221ENST00000636898 COX5AP20674 150 aa13.48□□□□□ -0.25
CHRNA7-221ENST00000636898 CDX1P47902 265 aaPredicted RBP13.48□□□□□ -0.25
CHRNA7-221ENST00000636898 FGF8P55075 233 aaPredicted RBP13.48□□□□□ -0.25
CHRNA7-221ENST00000636898 ZNF674Q2M3X9 581 aa13.48□□□□□ -0.25
CHRNA7-221ENST00000636898 ACP7Q6ZNF0 438 aa13.48□□□□□ -0.25
CHRNA7-221ENST00000636898 TMPRSS7Q7RTY8 843 aa13.48□□□□□ -0.25
CHRNA7-221ENST00000636898 GCNT2Q8N0V5 402 aa13.48□□□□□ -0.25
CHRNA7-221ENST00000636898 C5orf30Q96GV9 206 aa13.48□□□□□ -0.25
CHRNA7-221ENST00000636898 MRPL37Q9BZE1 423 aaKnown RBP13.48□□□□□ -0.25
CHRNA7-221ENST00000636898 OR51M1Q9H341 326 aa13.48□□□□□ -0.25
CHRNA7-221ENST00000636898 SDF2L1Q9HCN8 221 aa13.48□□□□□ -0.25
CHRNA7-221ENST00000636898 GSN-AS1Q9NRJ2 163 aa13.48□□□□□ -0.25
CHRNA7-221ENST00000636898 URGCP-MRPS24S4R325 110 aa13.48□□□□□ -0.25
CHRNA7-221ENST00000636898 IGHV3-64DA0A0J9YX35 117 aa13.47□□□□□ -0.25
CHRNA7-221ENST00000636898 TGOLN2O43493 480 aa13.47□□□□□ -0.25
CHRNA7-221ENST00000636898 NDUFS6O75380 124 aaKnown RBP13.47□□□□□ -0.25
CHRNA7-221ENST00000636898 CLDN14O95500 239 aa13.47□□□□□ -0.25
CHRNA7-221ENST00000636898 KRASP01116 189 aa13.47□□□□□ -0.25
CHRNA7-221ENST00000636898 HOXC12P31275 282 aa13.47□□□□□ -0.25
CHRNA7-221ENST00000636898 RPL30P62888 115 aaKnown RBP13.47□□□□□ -0.25
CHRNA7-221ENST00000636898 TGIF2-C20orf24A0A0A6YYL0 155 aa13.46□□□□□ -0.25
CHRNA7-221ENST00000636898 ODAMA1E959 279 aa13.46□□□□□ -0.25
CHRNA7-221ENST00000636898 CLDN34H7C241 214 aa13.46□□□□□ -0.25
CHRNA7-221ENST00000636898 MBP02144 154 aa13.46□□□□□ -0.25
CHRNA7-221ENST00000636898 KITLGP21583 273 aa13.46□□□□□ -0.25
CHRNA7-221ENST00000636898 S100PP25815 95 aa13.46□□□□□ -0.25
CHRNA7-221ENST00000636898 CD82P27701 267 aa13.46□□□□□ -0.25
CHRNA7-221ENST00000636898 G6PCP35575 357 aa13.46□□□□□ -0.25
CHRNA7-221ENST00000636898 PMP22Q01453 160 aa13.46□□□□□ -0.25
CHRNA7-221ENST00000636898 PAX5Q02548 391 aa13.46□□□□□ -0.25
CHRNA7-221ENST00000636898 AESQ08117 197 aa13.46□□□□□ -0.25
CHRNA7-221ENST00000636898 OR8G2PQ6IF36 304 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms