RNA–Protein interactions for RNA: ENST00000636670.1

CACNA1A-229, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

Gene CACNA1A, Length 740 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-229ENST00000636670 ELF5Q9UKW6 265 aaPredicted RBP12.96□□□□□ -0.33
CACNA1A-229ENST00000636670 IGHV1-3A0A0C4DH29 117 aa12.95□□□□□ -0.34
CACNA1A-229ENST00000636670 IGKV1-6A0A0C4DH72 117 aa12.95□□□□□ -0.34
CACNA1A-229ENST00000636670 CLPSL1A2RUU4 121 aa12.95□□□□□ -0.34
CACNA1A-229ENST00000636670 FAM90A9PA6NNJ1 464 aa12.95□□□□□ -0.34
CACNA1A-229ENST00000636670 G3V4G9 280 aa12.95□□□□□ -0.34
CACNA1A-229ENST00000636670 LANCL1O43813 399 aa12.95□□□□□ -0.34
CACNA1A-229ENST00000636670 PRB2P02812 416 aaPredicted RBP12.95□□□□□ -0.34
CACNA1A-229ENST00000636670 HERPUD1Q15011 391 aa12.95□□□□□ -0.34
CACNA1A-229ENST00000636670 THNSL2Q86YJ6 484 aa12.95□□□□□ -0.34
CACNA1A-229ENST00000636670 TGIF2LXQ8IUE1 241 aa12.95□□□□□ -0.34
CACNA1A-229ENST00000636670 LYG1Q8N1E2 194 aa12.95□□□□□ -0.34
CACNA1A-229ENST00000636670 DRAM1Q8N682 238 aa12.95□□□□□ -0.34
CACNA1A-229ENST00000636670 FAM110DQ8TAY7 271 aaPredicted RBP12.95□□□□□ -0.34
CACNA1A-229ENST00000636670 EPPK1P58107 5090 aaKnown RBP12.95□□□□□ -0.34
CACNA1A-229ENST00000636670 TRAV18A0A075B6X5 111 aa12.94□□□□□ -0.34
CACNA1A-229ENST00000636670 XRCC3O43542 346 aa12.94□□□□□ -0.34
CACNA1A-229ENST00000636670 OR2F2O95006 317 aa12.94□□□□□ -0.34
CACNA1A-229ENST00000636670 TSPAN15O95858 294 aa12.94□□□□□ -0.34
CACNA1A-229ENST00000636670 APOA1P02647 267 aa12.94□□□□□ -0.34
CACNA1A-229ENST00000636670 SNRNP70P08621 437 aaKnown RBP12.94□□□□□ -0.34
CACNA1A-229ENST00000636670 REG1BP48304 166 aa12.94□□□□□ -0.34
CACNA1A-229ENST00000636670 KRTAP10-3P60369 221 aa12.94□□□□□ -0.34
CACNA1A-229ENST00000636670 ZNF833PQ6ZTB9 187 aa12.94□□□□□ -0.34
CACNA1A-229ENST00000636670 ODF3L1Q8IXM7 274 aa12.94□□□□□ -0.34
CACNA1A-229ENST00000636670 CAPSLQ8WWF8 208 aa12.94□□□□□ -0.34
CACNA1A-229ENST00000636670 MAFIPQ8WZ33 124 aa12.94□□□□□ -0.34
CACNA1A-229ENST00000636670 S100A16Q96FQ6 103 aaKnown RBP12.94□□□□□ -0.34
CACNA1A-229ENST00000636670 SLC25A33Q9BSK2 321 aa12.94□□□□□ -0.34
CACNA1A-229ENST00000636670 GHITMQ9H3K2 345 aa12.94□□□□□ -0.34
CACNA1A-229ENST00000636670 AUNIPQ9H7T9 357 aa12.94□□□□□ -0.34
CACNA1A-229ENST00000636670 PIPOXQ9P0Z9 390 aa12.94□□□□□ -0.34
CACNA1A-229ENST00000636670 ZNF230Q9UIE0 474 aaPredicted RBP12.94□□□□□ -0.34
CACNA1A-229ENST00000636670 SAA2-SAA4A0A096LPE2 208 aa12.93□□□□□ -0.34
CACNA1A-229ENST00000636670 TRBV6-7A0A0A0MS04 114 aa12.93□□□□□ -0.34
CACNA1A-229ENST00000636670 ST8SIA5O15466 376 aa12.93□□□□□ -0.34
CACNA1A-229ENST00000636670 SSX5O60225 188 aa12.93□□□□□ -0.34
CACNA1A-229ENST00000636670 FAM106CPP0CH98 169 aa12.93□□□□□ -0.34
CACNA1A-229ENST00000636670 SAA2P0DJI9 122 aaPredicted RBP12.93□□□□□ -0.34
CACNA1A-229ENST00000636670 ZNF182P17025 639 aaPredicted RBP12.93□□□□□ -0.34
CACNA1A-229ENST00000636670 TMEM69Q5SWH9 247 aa12.93□□□□□ -0.34
CACNA1A-229ENST00000636670 MZT2AQ6P582 158 aa12.93□□□□□ -0.34
CACNA1A-229ENST00000636670 LINC01006Q8NI28 216 aa12.93□□□□□ -0.34
CACNA1A-229ENST00000636670 RBM14Q96PK6 669 aaKnown RBP12.93□□□□□ -0.34
CACNA1A-229ENST00000636670 PARP12Q9H0J9 701 aaKnown RBP12.93□□□□□ -0.34
CACNA1A-229ENST00000636670 COMMD3Q9UBI1 195 aa12.93□□□□□ -0.34
CACNA1A-229ENST00000636670 MOB4Q9Y3A3 225 aa12.93□□□□□ -0.34
CACNA1A-229ENST00000636670 M0QZK8 103 aa12.92□□□□□ -0.34
CACNA1A-229ENST00000636670 RAB29O14966 203 aa12.92□□□□□ -0.34
CACNA1A-229ENST00000636670 IGKV1D-33P01593 117 aa12.92□□□□□ -0.34
CACNA1A-229ENST00000636670 IGKV1-33P01594 117 aa12.92□□□□□ -0.34
CACNA1A-229ENST00000636670 EIF4EP06730 217 aaKnown RBP12.92□□□□□ -0.34
CACNA1A-229ENST00000636670 GSTT2P0CG29 244 aa12.92□□□□□ -0.34
CACNA1A-229ENST00000636670 GSTT2BP0CG30 244 aa12.92□□□□□ -0.34
CACNA1A-229ENST00000636670 TMEM11P17152 192 aa12.92□□□□□ -0.34
CACNA1A-229ENST00000636670 CD24P25063 80 aa12.92□□□□□ -0.34
CACNA1A-229ENST00000636670 CD1BP29016 333 aa12.92□□□□□ -0.34
CACNA1A-229ENST00000636670 SOX6P35712 828 aa12.92□□□□□ -0.34
CACNA1A-229ENST00000636670 CEACAM6P40199 344 aa12.92□□□□□ -0.34
CACNA1A-229ENST00000636670 TAS2R20P59543 309 aa12.92□□□□□ -0.34
CACNA1A-229ENST00000636670 LSAMPQ13449 338 aa12.92□□□□□ -0.34
CACNA1A-229ENST00000636670 EBI3Q14213 229 aa12.92□□□□□ -0.34
CACNA1A-229ENST00000636670 SPCS2Q15005 226 aa12.92□□□□□ -0.34
CACNA1A-229ENST00000636670 IGSF11Q5DX21 431 aa12.92□□□□□ -0.34
CACNA1A-229ENST00000636670 C11orf88Q6PI97 169 aa12.92□□□□□ -0.34
CACNA1A-229ENST00000636670 MOB3BQ86TA1 216 aa12.92□□□□□ -0.34
CACNA1A-229ENST00000636670 Q8N2B8 174 aa12.92□□□□□ -0.34
CACNA1A-229ENST00000636670 OR10J5Q8NHC4 309 aa12.92□□□□□ -0.34
CACNA1A-229ENST00000636670 OR2T6Q8NHC8 308 aa12.92□□□□□ -0.34
CACNA1A-229ENST00000636670 ISOC1Q96CN7 298 aa12.92□□□□□ -0.34
CACNA1A-229ENST00000636670 ZNF702PQ9H963 129 aa12.92□□□□□ -0.34
CACNA1A-229ENST00000636670 RDH8Q9NYR8 311 aa12.92□□□□□ -0.34
CACNA1A-229ENST00000636670 CCDC59Q9P031 241 aaKnown RBP12.92□□□□□ -0.34
CACNA1A-229ENST00000636670 RNF114Q9Y508 228 aa12.92□□□□□ -0.34
CACNA1A-229ENST00000636670 IGKV1D-8A0A087WSZ0 117 aa12.91□□□□□ -0.34
CACNA1A-229ENST00000636670 BET1O15155 118 aa12.91□□□□□ -0.34
CACNA1A-229ENST00000636670 CTXN2P0C2S0 81 aa12.91□□□□□ -0.34
CACNA1A-229ENST00000636670 CBX5P45973 191 aa12.91□□□□□ -0.34
CACNA1A-229ENST00000636670 HES1Q14469 280 aa12.91□□□□□ -0.34
CACNA1A-229ENST00000636670 SAMD5Q5TGI4 173 aa12.91□□□□□ -0.34
CACNA1A-229ENST00000636670 S1PR3Q99500 378 aa12.91□□□□□ -0.34
CACNA1A-229ENST00000636670 GINS4Q9BRT9 223 aa12.91□□□□□ -0.34
CACNA1A-229ENST00000636670 AGMATQ9BSE5 352 aa12.91□□□□□ -0.34
CACNA1A-229ENST00000636670 PRSS22Q9GZN4 317 aa12.91□□□□□ -0.34
CACNA1A-229ENST00000636670 C11orf54Q9H0W9 315 aaPredicted RBP12.91□□□□□ -0.34
CACNA1A-229ENST00000636670 H3BMQ9 156 aa12.9□□□□□ -0.34
CACNA1A-229ENST00000636670 FGF16O43320 207 aa12.9□□□□□ -0.34
CACNA1A-229ENST00000636670 PROK1P58294 105 aa12.9□□□□□ -0.34
CACNA1A-229ENST00000636670 CNIH2Q6PI25 160 aa12.9□□□□□ -0.34
CACNA1A-229ENST00000636670 H1FOOQ8IZA3 346 aaPredicted RBP12.9□□□□□ -0.34
CACNA1A-229ENST00000636670 Q8N6K4 173 aa12.9□□□□□ -0.34
CACNA1A-229ENST00000636670 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.9□□□□□ -0.34
CACNA1A-229ENST00000636670 OR2T10Q8NGZ9 312 aa12.9□□□□□ -0.34
CACNA1A-229ENST00000636670 NABP2Q9BQ15 211 aa12.9□□□□□ -0.34
CACNA1A-229ENST00000636670 ZNF251Q9BRH9 671 aa12.9□□□□□ -0.34
CACNA1A-229ENST00000636670 ST6GALNAC5Q9BVH7 336 aa12.9□□□□□ -0.34
CACNA1A-229ENST00000636670 MRPL20Q9BYC9 149 aaKnown RBP12.9□□□□□ -0.34
CACNA1A-229ENST00000636670 KRTAP17-1Q9BYP8 105 aa12.9□□□□□ -0.34
CACNA1A-229ENST00000636670 ANXA10Q9UJ72 324 aa12.9□□□□□ -0.34
CACNA1A-229ENST00000636670 IGHV3-72A0A0B4J1Y9 119 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms