RNA–Protein interactions for RNA: ENST00000626109.1

LINC00538-201, long intergenic non-protein coding RNA 538, humanhuman

BASIC

Gene LINC00538, Length 1,906 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00538-201ENST00000626109 A0A1B0GUS0 222 aa9.84□□□□□ -0.83
LINC00538-201ENST00000626109 NPIPB6E9PJ23 425 aa9.84□□□□□ -0.83
LINC00538-201ENST00000626109 PPP1R2P9O14990 202 aa9.84□□□□□ -0.83
LINC00538-201ENST00000626109 MRPL33O75394 65 aaKnown RBP9.84□□□□□ -0.83
LINC00538-201ENST00000626109 PMP2P02689 132 aa9.84□□□□□ -0.83
LINC00538-201ENST00000626109 CEACAM8P31997 349 aaPredicted RBP9.84□□□□□ -0.83
LINC00538-201ENST00000626109 PMELP40967 661 aa9.84□□□□□ -0.83
LINC00538-201ENST00000626109 LRRC37A5PQ49AS3 106 aa9.84□□□□□ -0.83
LINC00538-201ENST00000626109 VAX1Q5SQQ9 334 aa9.84□□□□□ -0.83
LINC00538-201ENST00000626109 FAM71F2Q6NXP2 309 aa9.84□□□□□ -0.83
LINC00538-201ENST00000626109 TFAP2EQ6VUC0 442 aa9.84□□□□□ -0.83
LINC00538-201ENST00000626109 HOGA1Q86XE5 327 aa9.84□□□□□ -0.83
LINC00538-201ENST00000626109 ZIC4Q8N9L1 334 aa9.84□□□□□ -0.83
LINC00538-201ENST00000626109 CASTOR1Q8WTX7 329 aa9.84□□□□□ -0.83
LINC00538-201ENST00000626109 RND1Q92730 232 aa9.84□□□□□ -0.83
LINC00538-201ENST00000626109 APH1AQ96BI3 265 aa9.84□□□□□ -0.83
LINC00538-201ENST00000626109 C1QTNF6Q9BXI9 259 aa9.84□□□□□ -0.83
LINC00538-201ENST00000626109 JKAMPQ9P055 326 aa9.84□□□□□ -0.83
LINC00538-201ENST00000626109 GTF3C1Q12789 2109 aa9.83□□□□□ -0.84
LINC00538-201ENST00000626109 BSNQ9UPA5 3926 aa9.83□□□□□ -0.84
LINC00538-201ENST00000626109 A0A0B4J2A0 478 aa9.83□□□□□ -0.84
LINC00538-201ENST00000626109 KBTBD11-OT1A0A1B0GTJ5 212 aa9.83□□□□□ -0.84
LINC00538-201ENST00000626109 HIST1H1DP16402 221 aaKnown RBP9.83□□□□□ -0.84
LINC00538-201ENST00000626109 CCL1P22362 96 aa9.83□□□□□ -0.84
LINC00538-201ENST00000626109 ZNF121P58317 390 aaPredicted RBP9.83□□□□□ -0.84
LINC00538-201ENST00000626109 DLK1P80370 383 aa9.83□□□□□ -0.84
LINC00538-201ENST00000626109 TNP2Q05952 138 aa9.83□□□□□ -0.84
LINC00538-201ENST00000626109 NUFIP2Q7Z417 695 aaKnown RBP9.83□□□□□ -0.84
LINC00538-201ENST00000626109 ZNF283Q8N7M2 679 aa9.83□□□□□ -0.84
LINC00538-201ENST00000626109 ZNF611Q8N823 705 aa9.83□□□□□ -0.84
LINC00538-201ENST00000626109 OR5AN1Q8NGI8 311 aa9.83□□□□□ -0.84
LINC00538-201ENST00000626109 SFXN3Q9BWM7 321 aa9.83□□□□□ -0.84
LINC00538-201ENST00000626109 LPAR5Q9H1C0 372 aa9.83□□□□□ -0.84
LINC00538-201ENST00000626109 SLC2A9Q9NRM0 540 aa9.83□□□□□ -0.84
LINC00538-201ENST00000626109 CLN8Q9UBY8 286 aa9.83□□□□□ -0.84
LINC00538-201ENST00000626109 SHPKQ9UHJ6 478 aa9.83□□□□□ -0.84
LINC00538-201ENST00000626109 EEF1E1-BLOC1S5C9J1V9 151 aa9.82□□□□□ -0.84
LINC00538-201ENST00000626109 CDC14BO60729 498 aa9.82□□□□□ -0.84
LINC00538-201ENST00000626109 EIF3GO75821 320 aaKnown RBP eCLIP9.82□□□□□ -0.84
LINC00538-201ENST00000626109 DANCRP0C864 163 aa9.82□□□□□ -0.84
LINC00538-201ENST00000626109 GZMHP20718 246 aa9.82□□□□□ -0.84
LINC00538-201ENST00000626109 ASCL1P50553 236 aa9.82□□□□□ -0.84
LINC00538-201ENST00000626109 ECH1Q13011 328 aa9.82□□□□□ -0.84
LINC00538-201ENST00000626109 GUSBP1Q15486 140 aa9.82□□□□□ -0.84
LINC00538-201ENST00000626109 C8orf31Q8N9H6 132 aa9.82□□□□□ -0.84
LINC00538-201ENST00000626109 RELL2Q8NC24 303 aaPredicted RBP9.82□□□□□ -0.84
LINC00538-201ENST00000626109 SEMA6DQ8NFY4 1073 aa9.82□□□□□ -0.84
LINC00538-201ENST00000626109 OR8B12Q8NGG6 310 aa9.82□□□□□ -0.84
LINC00538-201ENST00000626109 OR5H2Q8NGV7 314 aa9.82□□□□□ -0.84
LINC00538-201ENST00000626109 MRPS24Q96EL2 167 aaKnown RBP9.82□□□□□ -0.84
LINC00538-201ENST00000626109 GPR84Q9NQS5 396 aa9.82□□□□□ -0.84
LINC00538-201ENST00000626109 GPR160Q9UJ42 338 aa9.82□□□□□ -0.84
LINC00538-201ENST00000626109 ANAPC10Q9UM13 185 aa9.82□□□□□ -0.84
LINC00538-201ENST00000626109 V9GYY9 64 aa9.82□□□□□ -0.84
LINC00538-201ENST00000626109 ZFYVE26Q68DK2 2539 aa9.82□□□□□ -0.84
LINC00538-201ENST00000626109 A0A0G2JNJ9 132 aa9.82□□□□□ -0.84
LINC00538-201ENST00000626109 APOC3P02656 99 aa9.82□□□□□ -0.84
LINC00538-201ENST00000626109 TPT1P13693 172 aaKnown RBP9.82□□□□□ -0.84
LINC00538-201ENST00000626109 OPRM1P35372 400 aa9.82□□□□□ -0.84
LINC00538-201ENST00000626109 KIR2DL2P43627 348 aaPredicted RBP9.82□□□□□ -0.84
LINC00538-201ENST00000626109 OR3A2P47893 321 aa9.82□□□□□ -0.84
LINC00538-201ENST00000626109 TAS2R46P59540 309 aa9.82□□□□□ -0.84
LINC00538-201ENST00000626109 FOXF2Q12947 444 aa9.82□□□□□ -0.84
LINC00538-201ENST00000626109 ARFRP1Q13795 201 aa9.82□□□□□ -0.84
LINC00538-201ENST00000626109 GABRA6Q16445 453 aa9.82□□□□□ -0.84
LINC00538-201ENST00000626109 HIST3H3Q16695 136 aa9.82□□□□□ -0.84
LINC00538-201ENST00000626109 ZGRF1Q86YA3 2104 aa9.82□□□□□ -0.84
LINC00538-201ENST00000626109 ADAD2Q8NCV1 583 aaKnown RBP9.82□□□□□ -0.84
LINC00538-201ENST00000626109 S100A13Q99584 98 aa9.82□□□□□ -0.84
LINC00538-201ENST00000626109 MICU1Q9BPX6 476 aa9.82□□□□□ -0.84
LINC00538-201ENST00000626109 OR10A2Q9H208 303 aa9.82□□□□□ -0.84
LINC00538-201ENST00000626109 Q9UFV3 132 aa9.82□□□□□ -0.84
LINC00538-201ENST00000626109 PROCRQ9UNN8 238 aa9.82□□□□□ -0.84
LINC00538-201ENST00000626109 LSM4Q9Y4Z0 139 aaKnown RBP9.82□□□□□ -0.84
LINC00538-201ENST00000626109 A0A1W2PPE3 182 aa9.81□□□□□ -0.84
LINC00538-201ENST00000626109 CEACAM18A8MTB9 384 aa9.81□□□□□ -0.84
LINC00538-201ENST00000626109 TNFSF13O75888 250 aa9.81□□□□□ -0.84
LINC00538-201ENST00000626109 SFT2D2O95562 160 aa9.81□□□□□ -0.84
LINC00538-201ENST00000626109 IL18BPO95998 194 aa9.81□□□□□ -0.84
LINC00538-201ENST00000626109 FAM57BQ71RH2 274 aa9.81□□□□□ -0.84
LINC00538-201ENST00000626109 OR5AS1Q8N127 324 aa9.81□□□□□ -0.84
LINC00538-201ENST00000626109 POC1AQ8NBT0 407 aa9.81□□□□□ -0.84
LINC00538-201ENST00000626109 GJC3Q8NFK1 279 aa9.81□□□□□ -0.84
LINC00538-201ENST00000626109 OR51T1Q8NGJ9 327 aa9.81□□□□□ -0.84
LINC00538-201ENST00000626109 DCUN1D4Q92564 292 aa9.81□□□□□ -0.84
LINC00538-201ENST00000626109 NDUFAF3Q9BU61 184 aa9.81□□□□□ -0.84
LINC00538-201ENST00000626109 TREM2Q9NZC2 230 aa9.81□□□□□ -0.84
LINC00538-201ENST00000626109 CACNA1CQ13936 2221 aa9.8□□□□□ -0.84
LINC00538-201ENST00000626109 TRBV6-7A0A0A0MS04 114 aa9.8□□□□□ -0.84
LINC00538-201ENST00000626109 CLDN34H7C241 214 aa9.8□□□□□ -0.84
LINC00538-201ENST00000626109 RER1O15258 196 aa9.8□□□□□ -0.84
LINC00538-201ENST00000626109 GCSHP23434 173 aa9.8□□□□□ -0.84
LINC00538-201ENST00000626109 EIF5AP63241 154 aaKnown RBP9.8□□□□□ -0.84
LINC00538-201ENST00000626109 ATXN7L3Q14CW9 347 aaPredicted RBP9.8□□□□□ -0.84
LINC00538-201ENST00000626109 SLC22A6Q4U2R8 563 aa9.8□□□□□ -0.84
LINC00538-201ENST00000626109 EDARADDQ8WWZ3 215 aa9.8□□□□□ -0.84
LINC00538-201ENST00000626109 PP6455Q8WZ26 134 aa9.8□□□□□ -0.84
LINC00538-201ENST00000626109 ZNF629Q9UEG4 869 aaPredicted RBP9.8□□□□□ -0.84
LINC00538-201ENST00000626109 ARHGAP21Q5T5U3 1957 aa9.8□□□□□ -0.84
LINC00538-201ENST00000626109 K7EN84 100 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms