RNA–Protein interactions for RNA: ENST00000625423.2

VARS2-213, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2 BASIC

Gene VARS2, Length 3,362 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-213ENST00000625423 SPTA1P02549 2419 aa9.49□□□□□ -0.89
VARS2-213ENST00000625423 UBE2L5PA0A1B0GUS4 154 aa9.49□□□□□ -0.89
VARS2-213ENST00000625423 TRGC2P03986 189 aa9.49□□□□□ -0.89
VARS2-213ENST00000625423 ZNF883P0CG24 379 aa9.49□□□□□ -0.89
VARS2-213ENST00000625423 HOXA4Q00056 320 aaPredicted RBP9.49□□□□□ -0.89
VARS2-213ENST00000625423 RNFT1Q5M7Z0 435 aa9.49□□□□□ -0.89
VARS2-213ENST00000625423 ATP1A1-AS1Q5TC04 95 aa9.49□□□□□ -0.89
VARS2-213ENST00000625423 SPNS3Q6ZMD2 512 aa9.49□□□□□ -0.89
VARS2-213ENST00000625423 CA5BP1Q8WTZ4 195 aa9.49□□□□□ -0.89
VARS2-213ENST00000625423 NBEAQ8NFP9 2946 aa9.49□□□□□ -0.89
VARS2-213ENST00000625423 CEBPZOSA8MTT3 80 aa9.49□□□□□ -0.89
VARS2-213ENST00000625423 HIST1H2BKO60814 126 aa9.49□□□□□ -0.89
VARS2-213ENST00000625423 RAMP3O60896 148 aa9.49□□□□□ -0.89
VARS2-213ENST00000625423 HIST1H2BJP06899 126 aa9.49□□□□□ -0.89
VARS2-213ENST00000625423 HIST1H2BOP23527 126 aa9.49□□□□□ -0.89
VARS2-213ENST00000625423 HIST1H2BBP33778 126 aa9.49□□□□□ -0.89
VARS2-213ENST00000625423 CDX1P47902 265 aaPredicted RBP9.49□□□□□ -0.89
VARS2-213ENST00000625423 HIST1H2BDP58876 126 aa9.49□□□□□ -0.89
VARS2-213ENST00000625423 HIST1H2BCP62807 126 aa9.49□□□□□ -0.89
VARS2-213ENST00000625423 SERF2P84101 59 aa9.49□□□□□ -0.89
VARS2-213ENST00000625423 ZNF146Q15072 292 aa9.49□□□□□ -0.89
VARS2-213ENST00000625423 HIST2H2BEQ16778 126 aa9.49□□□□□ -0.89
VARS2-213ENST00000625423 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.49□□□□□ -0.89
VARS2-213ENST00000625423 BEND4Q6ZU67 534 aa9.49□□□□□ -0.89
VARS2-213ENST00000625423 OR1L1Q8NH94 360 aa9.49□□□□□ -0.89
VARS2-213ENST00000625423 SLC25A40Q8TBP6 338 aa9.49□□□□□ -0.89
VARS2-213ENST00000625423 HIST1H2BHQ93079 126 aa9.49□□□□□ -0.89
VARS2-213ENST00000625423 HIST1H2BNQ99877 126 aa9.49□□□□□ -0.89
VARS2-213ENST00000625423 HIST1H2BMQ99879 126 aa9.49□□□□□ -0.89
VARS2-213ENST00000625423 GGACTQ9BVM4 153 aa9.49□□□□□ -0.89
VARS2-213ENST00000625423 CDH20Q9HBT6 801 aa9.49□□□□□ -0.89
VARS2-213ENST00000625423 TRGV5A0A0B4J1U4 118 aa9.48□□□□□ -0.89
VARS2-213ENST00000625423 TRAV20A0A0B4J274 112 aa9.48□□□□□ -0.89
VARS2-213ENST00000625423 B4DEV8 164 aa9.48□□□□□ -0.89
VARS2-213ENST00000625423 PSPNO60542 156 aa9.48□□□□□ -0.89
VARS2-213ENST00000625423 CLDN1O95832 211 aa9.48□□□□□ -0.89
VARS2-213ENST00000625423 S100PP25815 95 aa9.48□□□□□ -0.89
VARS2-213ENST00000625423 SLC38A11Q08AI6 406 aa9.48□□□□□ -0.89
VARS2-213ENST00000625423 TMEM41BQ5BJD5 291 aa9.48□□□□□ -0.89
VARS2-213ENST00000625423 CXorf67Q86X51 503 aaPredicted RBP9.48□□□□□ -0.89
VARS2-213ENST00000625423 TAF15Q92804 592 aaKnown RBP eCLIP9.48□□□□□ -0.89
VARS2-213ENST00000625423 RBKSQ9H477 322 aa9.48□□□□□ -0.89
VARS2-213ENST00000625423 ARHGAP21Q5T5U3 1957 aa9.48□□□□□ -0.89
VARS2-213ENST00000625423 MAP1LC3B2A6NCE7 125 aa9.48□□□□□ -0.89
VARS2-213ENST00000625423 HAND1O96004 215 aa9.48□□□□□ -0.89
VARS2-213ENST00000625423 KRASP01116 189 aa9.48□□□□□ -0.89
VARS2-213ENST00000625423 OR3A1P47881 315 aa9.48□□□□□ -0.89
VARS2-213ENST00000625423 ZNF808Q8N4W9 903 aaPredicted RBP9.48□□□□□ -0.89
VARS2-213ENST00000625423 EDARADDQ8WWZ3 215 aa9.48□□□□□ -0.89
VARS2-213ENST00000625423 MAP1LC3BQ9GZQ8 125 aa9.48□□□□□ -0.89
VARS2-213ENST00000625423 LYZL6O75951 148 aa9.47□□□□□ -0.89
VARS2-213ENST00000625423 CD55P08174 381 aa9.47□□□□□ -0.89
VARS2-213ENST00000625423 CD46P15529 392 aa9.47□□□□□ -0.89
VARS2-213ENST00000625423 G6PCP35575 357 aa9.47□□□□□ -0.89
VARS2-213ENST00000625423 UBE2NP61088 152 aaKnown RBP9.47□□□□□ -0.89
VARS2-213ENST00000625423 RPL30P62888 115 aaKnown RBP9.47□□□□□ -0.89
VARS2-213ENST00000625423 TNFRSF9Q07011 255 aa9.47□□□□□ -0.89
VARS2-213ENST00000625423 ZNF816Q0VGE8 651 aaPredicted RBP9.47□□□□□ -0.89
VARS2-213ENST00000625423 PSG7Q13046 419 aa9.47□□□□□ -0.89
VARS2-213ENST00000625423 MRPL49Q13405 166 aaKnown RBP9.47□□□□□ -0.89
VARS2-213ENST00000625423 OR2D2Q9H210 308 aa9.47□□□□□ -0.89
VARS2-213ENST00000625423 SDF2L1Q9HCN8 221 aa9.47□□□□□ -0.89
VARS2-213ENST00000625423 DIDO1Q9BTC0 2240 aaKnown RBP9.47□□□□□ -0.89
VARS2-213ENST00000625423 WNT9BO14905 357 aa9.47□□□□□ -0.89
VARS2-213ENST00000625423 IGKV1D-33P01593 117 aa9.47□□□□□ -0.89
VARS2-213ENST00000625423 IGKV1-33P01594 117 aa9.47□□□□□ -0.89
VARS2-213ENST00000625423 TLE1Q04724 770 aa9.47□□□□□ -0.89
VARS2-213ENST00000625423 PNRC1Q12796 327 aaPredicted RBP9.47□□□□□ -0.89
VARS2-213ENST00000625423 ZNF826PQ6ZT77 177 aa9.47□□□□□ -0.89
VARS2-213ENST00000625423 MRGPRGQ86SM5 289 aa9.47□□□□□ -0.89
VARS2-213ENST00000625423 GCNT2Q8N0V5 402 aa9.47□□□□□ -0.89
VARS2-213ENST00000625423 ZNF645Q8N7E2 425 aa9.47□□□□□ -0.89
VARS2-213ENST00000625423 OR52L2PQ8NGH6 319 aa9.47□□□□□ -0.89
VARS2-213ENST00000625423 C5orf30Q96GV9 206 aa9.47□□□□□ -0.89
VARS2-213ENST00000625423 FAM210BQ96KR6 192 aa9.47□□□□□ -0.89
VARS2-213ENST00000625423 KCNIP1Q9NZI2 227 aa9.47□□□□□ -0.89
VARS2-213ENST00000625423 VAX2Q9UIW0 290 aa9.47□□□□□ -0.89
VARS2-213ENST00000625423 TINAGQ9UJW2 476 aa9.47□□□□□ -0.89
VARS2-213ENST00000625423 KIAA2026Q5HYC2 2103 aa9.47□□□□□ -0.89
VARS2-213ENST00000625423 RNF212BA8MTL3 300 aa9.47□□□□□ -0.89
VARS2-213ENST00000625423 HMGB3O15347 200 aaKnown RBP9.47□□□□□ -0.89
VARS2-213ENST00000625423 CYB5R3P00387 301 aaPredicted RBP9.47□□□□□ -0.89
VARS2-213ENST00000625423 IGHV2-70P01814 119 aa9.47□□□□□ -0.89
VARS2-213ENST00000625423 TFF1P04155 84 aa9.47□□□□□ -0.89
VARS2-213ENST00000625423 PYY3Q5JQD4 70 aa9.47□□□□□ -0.89
VARS2-213ENST00000625423 TMEM14EPQ6UXP3 125 aa9.47□□□□□ -0.89
VARS2-213ENST00000625423 RPP25LQ8N5L8 163 aaKnown RBP9.47□□□□□ -0.89
VARS2-213ENST00000625423 PINX1Q96BK5 328 aaKnown RBP9.47□□□□□ -0.89
VARS2-213ENST00000625423 FER1L6-AS2Q96M78 137 aa9.47□□□□□ -0.89
VARS2-213ENST00000625423 SSX3Q99909 188 aa9.47□□□□□ -0.89
VARS2-213ENST00000625423 C12orf77C9JDV5 145 aa9.46□□□□□ -0.89
VARS2-213ENST00000625423 CLDN34H7C241 214 aa9.46□□□□□ -0.89
VARS2-213ENST00000625423 ZNF737O75373 536 aa9.46□□□□□ -0.89
VARS2-213ENST00000625423 IGHV1-2P23083 117 aa9.46□□□□□ -0.89
VARS2-213ENST00000625423 MPV17P39210 176 aa9.46□□□□□ -0.89
VARS2-213ENST00000625423 AESQ08117 197 aa9.46□□□□□ -0.89
VARS2-213ENST00000625423 PDZD11Q5EBL8 140 aa9.46□□□□□ -0.89
VARS2-213ENST00000625423 ZNF766Q5HY98 468 aa9.46□□□□□ -0.89
VARS2-213ENST00000625423 GFI1BQ5VTD9 330 aa9.46□□□□□ -0.89
VARS2-213ENST00000625423 TMPRSS7Q7RTY8 843 aa9.46□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms