RNA–Protein interactions for RNA: ENST00000620204.3

TNFAIP3-210, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 3,817 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-210ENST00000620204 EDDM3BP56851 147 aa8.37□□□□□ -1.07
TNFAIP3-210ENST00000620204 DEFB133Q30KQ1 61 aa8.37□□□□□ -1.07
TNFAIP3-210ENST00000620204 LRTM2Q8N967 370 aa8.37□□□□□ -1.07
TNFAIP3-210ENST00000620204 ADPRHL1Q8NDY3 354 aa8.37□□□□□ -1.07
TNFAIP3-210ENST00000620204 ADIPOR1Q96A54 375 aa8.37□□□□□ -1.07
TNFAIP3-210ENST00000620204 UQCR10Q9UDW1 63 aa8.37□□□□□ -1.07
TNFAIP3-210ENST00000620204 CBR3O75828 277 aa8.37□□□□□ -1.07
TNFAIP3-210ENST00000620204 MGST1P10620 155 aaKnown RBP8.37□□□□□ -1.07
TNFAIP3-210ENST00000620204 CD38P28907 300 aa8.37□□□□□ -1.07
TNFAIP3-210ENST00000620204 DTX1Q86Y01 620 aa8.37□□□□□ -1.07
TNFAIP3-210ENST00000620204 OR5L2Q8NGL0 311 aa8.37□□□□□ -1.07
TNFAIP3-210ENST00000620204 TAF15Q92804 592 aaKnown RBP eCLIP8.37□□□□□ -1.07
TNFAIP3-210ENST00000620204 TM2D1Q9BX74 207 aa8.37□□□□□ -1.07
TNFAIP3-210ENST00000620204 ULBP2Q9BZM5 246 aa8.37□□□□□ -1.07
TNFAIP3-210ENST00000620204 ALKBH4Q9NXW9 302 aa8.37□□□□□ -1.07
TNFAIP3-210ENST00000620204 IGHV5-51A0A0C4DH38 117 aa8.37□□□□□ -1.07
TNFAIP3-210ENST00000620204 RAB29O14966 203 aa8.37□□□□□ -1.07
TNFAIP3-210ENST00000620204 SRP14P37108 136 aaKnown RBP8.37□□□□□ -1.07
TNFAIP3-210ENST00000620204 DUSP3P51452 185 aaPredicted RBP8.37□□□□□ -1.07
TNFAIP3-210ENST00000620204 C9orf135Q5VTT2 229 aa8.37□□□□□ -1.07
TNFAIP3-210ENST00000620204 ZNF721Q8TF20 911 aa8.37□□□□□ -1.07
TNFAIP3-210ENST00000620204 TBL2Q9Y4P3 447 aaKnown RBP8.37□□□□□ -1.07
TNFAIP3-210ENST00000620204 TNRC18O15417 2968 aaPredicted RBP8.36□□□□□ -1.07
TNFAIP3-210ENST00000620204 ZNF814B7Z6K7 855 aa8.36□□□□□ -1.07
TNFAIP3-210ENST00000620204 FBLP22087 321 aaKnown RBP8.36□□□□□ -1.07
TNFAIP3-210ENST00000620204 PAFAH1B2P68402 229 aa8.36□□□□□ -1.07
TNFAIP3-210ENST00000620204 SHBQ15464 509 aa8.36□□□□□ -1.07
TNFAIP3-210ENST00000620204 AARDQ4LEZ3 155 aa8.36□□□□□ -1.07
TNFAIP3-210ENST00000620204 Q56UQ5 140 aa8.36□□□□□ -1.07
TNFAIP3-210ENST00000620204 LCN12Q6JVE5 192 aa8.36□□□□□ -1.07
TNFAIP3-210ENST00000620204 S100A7AQ86SG5 101 aa8.36□□□□□ -1.07
TNFAIP3-210ENST00000620204 C20orf144Q9BQM9 153 aa8.36□□□□□ -1.07
TNFAIP3-210ENST00000620204 NKX6-3A6NJ46 265 aa8.36□□□□□ -1.07
TNFAIP3-210ENST00000620204 IGHV3-9P01782 118 aa8.36□□□□□ -1.07
TNFAIP3-210ENST00000620204 ATP5G3P48201 142 aa8.36□□□□□ -1.07
TNFAIP3-210ENST00000620204 PAX9P55771 341 aa8.36□□□□□ -1.07
TNFAIP3-210ENST00000620204 SOX8P57073 446 aa8.36□□□□□ -1.07
TNFAIP3-210ENST00000620204 ZNF525Q8N782 197 aa8.36□□□□□ -1.07
TNFAIP3-210ENST00000620204 TWSG1Q9GZX9 223 aa8.36□□□□□ -1.07
TNFAIP3-210ENST00000620204 GPR27Q9NS67 375 aa8.36□□□□□ -1.07
TNFAIP3-210ENST00000620204 PTRH2Q9Y3E5 179 aaKnown RBP8.36□□□□□ -1.07
TNFAIP3-210ENST00000620204 DOCK10Q96BY6 2186 aa8.36□□□□□ -1.07
TNFAIP3-210ENST00000620204 LAMA1P25391 3075 aa8.36□□□□□ -1.07
TNFAIP3-210ENST00000620204 TRAV38-1A0A0B4J264 116 aa8.36□□□□□ -1.07
TNFAIP3-210ENST00000620204 TSPAN2O60636 221 aa8.36□□□□□ -1.07
TNFAIP3-210ENST00000620204 IGKV1D-33P01593 117 aa8.36□□□□□ -1.07
TNFAIP3-210ENST00000620204 IGKV1-33P01594 117 aa8.36□□□□□ -1.07
TNFAIP3-210ENST00000620204 COX5AP20674 150 aa8.36□□□□□ -1.07
TNFAIP3-210ENST00000620204 RIPPLY3P57055 190 aa8.36□□□□□ -1.07
TNFAIP3-210ENST00000620204 SERF2P84101 59 aa8.36□□□□□ -1.07
TNFAIP3-210ENST00000620204 UBE2V1Q13404 147 aa8.36□□□□□ -1.07
TNFAIP3-210ENST00000620204 FBLN7Q53RD9 439 aa8.36□□□□□ -1.07
TNFAIP3-210ENST00000620204 Q5PR19 223 aa8.36□□□□□ -1.07
TNFAIP3-210ENST00000620204 PRR31Q5SQ13 230 aa8.36□□□□□ -1.07
TNFAIP3-210ENST00000620204 TPTE2P1Q5T6R2 138 aa8.36□□□□□ -1.07
TNFAIP3-210ENST00000620204 Q6ZRM9 215 aa8.36□□□□□ -1.07
TNFAIP3-210ENST00000620204 ZNF611Q8N823 705 aa8.36□□□□□ -1.07
TNFAIP3-210ENST00000620204 OR2M3Q8NG83 312 aa8.36□□□□□ -1.07
TNFAIP3-210ENST00000620204 OR4B1Q8NGF8 309 aa8.36□□□□□ -1.07
TNFAIP3-210ENST00000620204 OR10G8Q8NGN5 311 aa8.36□□□□□ -1.07
TNFAIP3-210ENST00000620204 SIGLEC12Q96PQ1 595 aa8.36□□□□□ -1.07
TNFAIP3-210ENST00000620204 GCM1Q9NP62 436 aa8.36□□□□□ -1.07
TNFAIP3-210ENST00000620204 TCFL5Q9UL49 500 aa8.36□□□□□ -1.07
TNFAIP3-210ENST00000620204 MYO15AQ9UKN7 3530 aa8.35□□□□□ -1.07
TNFAIP3-210ENST00000620204 TRAV1-1A0A0B4J248 108 aa8.35□□□□□ -1.07
TNFAIP3-210ENST00000620204 KIR2DS5A0A0G2JLQ3 304 aa8.35□□□□□ -1.07
TNFAIP3-210ENST00000620204 A0A0G2JNG1 304 aa8.35□□□□□ -1.07
TNFAIP3-210ENST00000620204 SLC22A20A6NK97 555 aa8.35□□□□□ -1.07
TNFAIP3-210ENST00000620204 KIR2DS3K7RE56 304 aa8.35□□□□□ -1.07
TNFAIP3-210ENST00000620204 RPL19P84098 196 aaKnown RBP8.35□□□□□ -1.07
TNFAIP3-210ENST00000620204 KIR2DS5Q14953 304 aa8.35□□□□□ -1.07
TNFAIP3-210ENST00000620204 HLA-DRB5Q30154 266 aa8.35□□□□□ -1.07
TNFAIP3-210ENST00000620204 OR4A47Q6IF82 309 aa8.35□□□□□ -1.07
TNFAIP3-210ENST00000620204 SAXO1Q8IYX7 474 aa8.35□□□□□ -1.07
TNFAIP3-210ENST00000620204 LOXL4Q96JB6 756 aa8.35□□□□□ -1.07
TNFAIP3-210ENST00000620204 WDR61Q9GZS3 305 aaKnown RBP8.35□□□□□ -1.07
TNFAIP3-210ENST00000620204 ZNF703Q9H7S9 590 aaPredicted RBP8.35□□□□□ -1.07
TNFAIP3-210ENST00000620204 TAAR3PQ9P1P4 343 aa8.35□□□□□ -1.07
TNFAIP3-210ENST00000620204 CNOT1A5YKK6 2376 aaKnown RBP8.35□□□□□ -1.07
TNFAIP3-210ENST00000620204 IGKV1-12A0A0C4DH73 117 aa8.35□□□□□ -1.07
TNFAIP3-210ENST00000620204 IGKV1D-12P01611 117 aa8.35□□□□□ -1.07
TNFAIP3-210ENST00000620204 CLPSP04118 112 aa8.35□□□□□ -1.07
TNFAIP3-210ENST00000620204 CFIP05156 583 aa8.35□□□□□ -1.07
TNFAIP3-210ENST00000620204 SLC25A6P12236 298 aa8.35□□□□□ -1.07
TNFAIP3-210ENST00000620204 OTX1P32242 354 aaPredicted RBP8.35□□□□□ -1.07
TNFAIP3-210ENST00000620204 RAET1LQ5VY80 246 aa8.35□□□□□ -1.07
TNFAIP3-210ENST00000620204 KIAA0895LQ68EN5 471 aa8.35□□□□□ -1.07
TNFAIP3-210ENST00000620204 MRPL54Q6P161 138 aaKnown RBP8.35□□□□□ -1.07
TNFAIP3-210ENST00000620204 KLHDC1Q8N7A1 406 aa8.35□□□□□ -1.07
TNFAIP3-210ENST00000620204 IFI44Q8TCB0 444 aa8.35□□□□□ -1.07
TNFAIP3-210ENST00000620204 MBD3L1Q8WWY6 194 aa8.35□□□□□ -1.07
TNFAIP3-210ENST00000620204 SLC35D1Q9NTN3 355 aa8.35□□□□□ -1.07
TNFAIP3-210ENST00000620204 CLN8Q9UBY8 286 aa8.35□□□□□ -1.07
TNFAIP3-210ENST00000620204 RIF1Q5UIP0 2472 aaKnown RBP8.35□□□□□ -1.07
TNFAIP3-210ENST00000620204 IGKV1-27A0A075B6S5 117 aa8.35□□□□□ -1.07
TNFAIP3-210ENST00000620204 PGLYRP1O75594 196 aaPredicted RBP8.35□□□□□ -1.07
TNFAIP3-210ENST00000620204 TDGF1P13385 188 aa8.35□□□□□ -1.07
TNFAIP3-210ENST00000620204 GLB1P16278 677 aa8.35□□□□□ -1.07
TNFAIP3-210ENST00000620204 F2RP25116 425 aa8.35□□□□□ -1.07
TNFAIP3-210ENST00000620204 SELENOTP62341 195 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms