RNA–Protein interactions for RNA: ENST00000612509.4

SEMA3B-211, Transcript of semaphorin 3B, humanhuman

TSL 5

Gene SEMA3B, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-211ENST00000612509 MOSP00540 346 aa14.36□□□□□ -0.11
SEMA3B-211ENST00000612509 TALDO1P37837 337 aa14.36□□□□□ -0.11
SEMA3B-211ENST00000612509 CEACAM6P40199 344 aa14.36□□□□□ -0.11
SEMA3B-211ENST00000612509 HIST2H2BDQ6DRA6 164 aa14.36□□□□□ -0.11
SEMA3B-211ENST00000612509 CROCCP3Q8IVE0 287 aa14.36□□□□□ -0.11
SEMA3B-211ENST00000612509 RBMXL1Q96E39 390 aaKnown RBP14.36□□□□□ -0.11
SEMA3B-211ENST00000612509 NABP2Q9BQ15 211 aa14.36□□□□□ -0.11
SEMA3B-211ENST00000612509 C11orf54Q9H0W9 315 aaPredicted RBP14.36□□□□□ -0.11
SEMA3B-211ENST00000612509 RAB29O14966 203 aa14.35□□□□□ -0.11
SEMA3B-211ENST00000612509 GSTP1P09211 210 aaKnown RBP14.35□□□□□ -0.11
SEMA3B-211ENST00000612509 GSTT2P0CG29 244 aa14.35□□□□□ -0.11
SEMA3B-211ENST00000612509 GSTT2BP0CG30 244 aa14.35□□□□□ -0.11
SEMA3B-211ENST00000612509 DTYMKP23919 212 aa14.35□□□□□ -0.11
SEMA3B-211ENST00000612509 SERPINB10P48595 397 aa14.35□□□□□ -0.11
SEMA3B-211ENST00000612509 C2orf68Q2NKX9 166 aa14.35□□□□□ -0.11
SEMA3B-211ENST00000612509 CDNFQ49AH0 187 aa14.35□□□□□ -0.11
SEMA3B-211ENST00000612509 HACD4Q5VWC8 232 aa14.35□□□□□ -0.11
SEMA3B-211ENST00000612509 TREML4Q6UXN2 200 aa14.35□□□□□ -0.11
SEMA3B-211ENST00000612509 NUDCD2Q8WVJ2 157 aa14.35□□□□□ -0.11
SEMA3B-211ENST00000612509 ABHD14BQ96IU4 210 aa14.35□□□□□ -0.11
SEMA3B-211ENST00000612509 ZNF251Q9BRH9 671 aa14.35□□□□□ -0.11
SEMA3B-211ENST00000612509 AGMATQ9BSE5 352 aa14.35□□□□□ -0.11
SEMA3B-211ENST00000612509 RDH8Q9NYR8 311 aa14.35□□□□□ -0.11
SEMA3B-211ENST00000612509 SPATA2Q9UM82 520 aa14.35□□□□□ -0.11
SEMA3B-211ENST00000612509 DIRAS3O95661 229 aa14.34□□□□□ -0.11
SEMA3B-211ENST00000612509 TSPAN15O95858 294 aa14.34□□□□□ -0.11
SEMA3B-211ENST00000612509 CD28P10747 220 aa14.34□□□□□ -0.11
SEMA3B-211ENST00000612509 RPS19P39019 145 aaKnown RBP14.34□□□□□ -0.11
SEMA3B-211ENST00000612509 GNG2P59768 71 aa14.34□□□□□ -0.11
SEMA3B-211ENST00000612509 NCS1P62166 190 aa14.34□□□□□ -0.11
SEMA3B-211ENST00000612509 SRSF7Q16629 238 aaKnown RBP eCLIP14.34□□□□□ -0.11
SEMA3B-211ENST00000612509 ZNF260Q3ZCT1 412 aa14.34□□□□□ -0.11
SEMA3B-211ENST00000612509 RPL39P5Q59GN2 51 aa14.34□□□□□ -0.11
SEMA3B-211ENST00000612509 IGSF11Q5DX21 431 aa14.34□□□□□ -0.11
SEMA3B-211ENST00000612509 Q6ZS49 121 aa14.34□□□□□ -0.11
SEMA3B-211ENST00000612509 Q8N9W7 124 aa14.34□□□□□ -0.11
SEMA3B-211ENST00000612509 S1PR3Q99500 378 aa14.34□□□□□ -0.11
SEMA3B-211ENST00000612509 MRPS26Q9BYN8 205 aaKnown RBP14.34□□□□□ -0.11
SEMA3B-211ENST00000612509 TOLLIPQ9H0E2 274 aa14.34□□□□□ -0.11
SEMA3B-211ENST00000612509 CMYA5Q8N3K9 4069 aa14.34□□□□□ -0.11
SEMA3B-211ENST00000612509 IGKV1D-8A0A087WSZ0 117 aa14.33□□□□□ -0.12
SEMA3B-211ENST00000612509 TRBV6-7A0A0A0MS04 114 aa14.33□□□□□ -0.12
SEMA3B-211ENST00000612509 NCBP2LA6PVI3 153 aaKnown RBP14.33□□□□□ -0.12
SEMA3B-211ENST00000612509 BET1O15155 118 aa14.33□□□□□ -0.12
SEMA3B-211ENST00000612509 PNLIPRP3Q17RR3 467 aa14.33□□□□□ -0.12
SEMA3B-211ENST00000612509 OR8H1Q8NGG4 311 aa14.33□□□□□ -0.12
SEMA3B-211ENST00000612509 PHF21AQ96BD5 680 aa14.33□□□□□ -0.12
SEMA3B-211ENST00000612509 MMP27Q9H306 513 aa14.33□□□□□ -0.12
SEMA3B-211ENST00000612509 GHITMQ9H3K2 345 aa14.33□□□□□ -0.12
SEMA3B-211ENST00000612509 LIN7CQ9NUP9 197 aaKnown RBP14.33□□□□□ -0.12
SEMA3B-211ENST00000612509 A0A0A6YYH2 397 aa14.32□□□□□ -0.12
SEMA3B-211ENST00000612509 A6NJ64 397 aa14.32□□□□□ -0.12
SEMA3B-211ENST00000612509 VBP1P61758 197 aa14.32□□□□□ -0.12
SEMA3B-211ENST00000612509 PITPNAQ00169 270 aa14.32□□□□□ -0.12
SEMA3B-211ENST00000612509 FAM131AQ6UXB0 335 aa14.32□□□□□ -0.12
SEMA3B-211ENST00000612509 OR10J5Q8NHC4 309 aa14.32□□□□□ -0.12
SEMA3B-211ENST00000612509 SLC25A46Q96AG3 418 aa14.32□□□□□ -0.12
SEMA3B-211ENST00000612509 PLSCR3Q9NRY6 295 aa14.32□□□□□ -0.12
SEMA3B-211ENST00000612509 WNK1Q9H4A3 2382 aa14.32□□□□□ -0.12
SEMA3B-211ENST00000612509 MGAM2Q2M2H8 2515 aa14.31□□□□□ -0.12
SEMA3B-211ENST00000612509 OR5H14A6NHG9 310 aa14.31□□□□□ -0.12
SEMA3B-211ENST00000612509 GABARAPO95166 117 aa14.31□□□□□ -0.12
SEMA3B-211ENST00000612509 CSF1P09603 554 aa14.31□□□□□ -0.12
SEMA3B-211ENST00000612509 GPR12P47775 334 aa14.31□□□□□ -0.12
SEMA3B-211ENST00000612509 F2RL1P55085 397 aa14.31□□□□□ -0.12
SEMA3B-211ENST00000612509 MMDQ15546 238 aa14.31□□□□□ -0.12
SEMA3B-211ENST00000612509 GLDNQ6ZMI3 551 aaPredicted RBP14.31□□□□□ -0.12
SEMA3B-211ENST00000612509 SLC35E3Q7Z769 313 aa14.31□□□□□ -0.12
SEMA3B-211ENST00000612509 FAM71E2Q8N5Q1 922 aa14.31□□□□□ -0.12
SEMA3B-211ENST00000612509 OR5AU1Q8NGC0 362 aa14.31□□□□□ -0.12
SEMA3B-211ENST00000612509 CITED2Q99967 270 aaPredicted RBP14.31□□□□□ -0.12
SEMA3B-211ENST00000612509 ABCG5Q9H222 651 aa14.31□□□□□ -0.12
SEMA3B-211ENST00000612509 DCSTAMPQ9H295 470 aa14.31□□□□□ -0.12
SEMA3B-211ENST00000612509 ZNF221Q9UK13 617 aa14.31□□□□□ -0.12
SEMA3B-211ENST00000612509 RNF150Q9ULK6 438 aa14.31□□□□□ -0.12
SEMA3B-211ENST00000612509 TRAV18A0A075B6X5 111 aa14.3□□□□□ -0.12
SEMA3B-211ENST00000612509 SSX5O60225 188 aa14.3□□□□□ -0.12
SEMA3B-211ENST00000612509 IGHG2P01859 326 aa14.3□□□□□ -0.12
SEMA3B-211ENST00000612509 CT45A6P0DMU7 189 aa14.3□□□□□ -0.12
SEMA3B-211ENST00000612509 CT45A5P0DMU8 189 aa14.3□□□□□ -0.12
SEMA3B-211ENST00000612509 CT45A7P0DMV0 189 aa14.3□□□□□ -0.12
SEMA3B-211ENST00000612509 ACTBP60709 375 aa14.3□□□□□ -0.12
SEMA3B-211ENST00000612509 UBE2NLQ5JXB2 153 aa14.3□□□□□ -0.12
SEMA3B-211ENST00000612509 CENPVQ7Z7K6 275 aaPredicted RBP14.3□□□□□ -0.12
SEMA3B-211ENST00000612509 NDUFA11Q86Y39 141 aa14.3□□□□□ -0.12
SEMA3B-211ENST00000612509 ANKRD13BQ86YJ7 626 aa14.3□□□□□ -0.12
SEMA3B-211ENST00000612509 RASL11BQ9BPW5 248 aa14.3□□□□□ -0.12
SEMA3B-211ENST00000612509 GINS4Q9BRT9 223 aa14.3□□□□□ -0.12
SEMA3B-211ENST00000612509 ST6GALNAC5Q9BVH7 336 aa14.3□□□□□ -0.12
SEMA3B-211ENST00000612509 NAA50Q9GZZ1 169 aaKnown RBP14.3□□□□□ -0.12
SEMA3B-211ENST00000612509 OR2D2Q9H210 308 aa14.3□□□□□ -0.12
SEMA3B-211ENST00000612509 DIABLOQ9NR28 239 aa14.3□□□□□ -0.12
SEMA3B-211ENST00000612509 PKD1L1Q8TDX9 2849 aa14.29□□□□□ -0.12
SEMA3B-211ENST00000612509 H0YJW9 148 aa14.29□□□□□ -0.12
SEMA3B-211ENST00000612509 NSUN5P1Q3KNT7 163 aa14.29□□□□□ -0.12
SEMA3B-211ENST00000612509 C10orf99Q6UWK7 81 aa14.29□□□□□ -0.12
SEMA3B-211ENST00000612509 FOXRED2Q8IWF2 684 aa14.29□□□□□ -0.12
SEMA3B-211ENST00000612509 H1FOOQ8IZA3 346 aaPredicted RBP14.29□□□□□ -0.12
SEMA3B-211ENST00000612509 ZNF436-AS1Q8NC38 126 aaPredicted RBP14.29□□□□□ -0.12
SEMA3B-211ENST00000612509 OR4X2Q8NGF9 303 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms