RNA–Protein interactions for RNA: ENST00000606878.1

LINC00240-203, long intergenic non-protein coding RNA 240, humanhuman

TSL 1 (best)

Gene LINC00240, Length 927 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00240-203ENST00000606878 FCGR3AP08637 254 aa13.14□□□□□ -0.31
LINC00240-203ENST00000606878 SAA2P0DJI9 122 aaPredicted RBP13.14□□□□□ -0.31
LINC00240-203ENST00000606878 LSAMPQ13449 338 aa13.14□□□□□ -0.31
LINC00240-203ENST00000606878 SRSF7Q16629 238 aaKnown RBP eCLIP13.14□□□□□ -0.31
LINC00240-203ENST00000606878 HIST2H2BDQ6DRA6 164 aa13.14□□□□□ -0.31
LINC00240-203ENST00000606878 FAM71F2Q6NXP2 309 aa13.14□□□□□ -0.31
LINC00240-203ENST00000606878 CROCCP3Q8IVE0 287 aa13.14□□□□□ -0.31
LINC00240-203ENST00000606878 LGALS14Q8TCE9 139 aa13.14□□□□□ -0.31
LINC00240-203ENST00000606878 ABHD14BQ96IU4 210 aa13.14□□□□□ -0.31
LINC00240-203ENST00000606878 CITED2Q99967 270 aaPredicted RBP13.14□□□□□ -0.31
LINC00240-203ENST00000606878 NABP2Q9BQ15 211 aa13.14□□□□□ -0.31
LINC00240-203ENST00000606878 AGMATQ9BSE5 352 aa13.14□□□□□ -0.31
LINC00240-203ENST00000606878 MRPL20Q9BYC9 149 aaKnown RBP13.14□□□□□ -0.31
LINC00240-203ENST00000606878 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.14□□□□□ -0.31
LINC00240-203ENST00000606878 LIN7CQ9NUP9 197 aaKnown RBP13.14□□□□□ -0.31
LINC00240-203ENST00000606878 ZNF230Q9UIE0 474 aaPredicted RBP13.14□□□□□ -0.31
LINC00240-203ENST00000606878 ZNF221Q9UK13 617 aa13.14□□□□□ -0.31
LINC00240-203ENST00000606878 RNF150Q9ULK6 438 aa13.14□□□□□ -0.31
LINC00240-203ENST00000606878 ETV7Q9Y603 341 aa13.14□□□□□ -0.31
LINC00240-203ENST00000606878 IGKV1-6A0A0C4DH72 117 aa13.13□□□□□ -0.31
LINC00240-203ENST00000606878 TRIM64CA6NLI5 447 aa13.13□□□□□ -0.31
LINC00240-203ENST00000606878 TSPAN15O95858 294 aa13.13□□□□□ -0.31
LINC00240-203ENST00000606878 GSTP1P09211 210 aaKnown RBP13.13□□□□□ -0.31
LINC00240-203ENST00000606878 GSTT2P0CG29 244 aa13.13□□□□□ -0.31
LINC00240-203ENST00000606878 GSTT2BP0CG30 244 aa13.13□□□□□ -0.31
LINC00240-203ENST00000606878 PITPNAQ00169 270 aa13.13□□□□□ -0.31
LINC00240-203ENST00000606878 NSUN5P1Q3KNT7 163 aa13.13□□□□□ -0.31
LINC00240-203ENST00000606878 HACD4Q5VWC8 232 aa13.13□□□□□ -0.31
LINC00240-203ENST00000606878 SLC35E3Q7Z769 313 aa13.13□□□□□ -0.31
LINC00240-203ENST00000606878 NDUFA11Q86Y39 141 aa13.13□□□□□ -0.31
LINC00240-203ENST00000606878 FOXRED2Q8IWF2 684 aa13.13□□□□□ -0.31
LINC00240-203ENST00000606878 Q8N9W7 124 aa13.13□□□□□ -0.31
LINC00240-203ENST00000606878 OR10J5Q8NHC4 309 aa13.13□□□□□ -0.31
LINC00240-203ENST00000606878 PARP12Q9H0J9 701 aaKnown RBP13.13□□□□□ -0.31
LINC00240-203ENST00000606878 RHBDL2Q9NX52 303 aa13.13□□□□□ -0.31
LINC00240-203ENST00000606878 RDH8Q9NYR8 311 aa13.13□□□□□ -0.31
LINC00240-203ENST00000606878 TCRBV4S1A1TA0A5B7 111 aa13.12□□□□□ -0.31
LINC00240-203ENST00000606878 BET1O15155 118 aa13.12□□□□□ -0.31
LINC00240-203ENST00000606878 DIRAS3O95661 229 aa13.12□□□□□ -0.31
LINC00240-203ENST00000606878 IGHG2P01859 326 aa13.12□□□□□ -0.31
LINC00240-203ENST00000606878 MC5RP33032 325 aa13.12□□□□□ -0.31
LINC00240-203ENST00000606878 F2RL1P55085 397 aa13.12□□□□□ -0.31
LINC00240-203ENST00000606878 LSM3P62310 102 aaKnown RBP13.12□□□□□ -0.31
LINC00240-203ENST00000606878 CD83Q01151 205 aa13.12□□□□□ -0.31
LINC00240-203ENST00000606878 RPL39P5Q59GN2 51 aa13.12□□□□□ -0.31
LINC00240-203ENST00000606878 Q6ZS49 121 aa13.12□□□□□ -0.31
LINC00240-203ENST00000606878 OR4X2Q8NGF9 303 aa13.12□□□□□ -0.31
LINC00240-203ENST00000606878 CHPT1Q8WUD6 406 aa13.12□□□□□ -0.31
LINC00240-203ENST00000606878 ZNF251Q9BRH9 671 aa13.12□□□□□ -0.31
LINC00240-203ENST00000606878 ST6GALNAC5Q9BVH7 336 aa13.12□□□□□ -0.31
LINC00240-203ENST00000606878 TOLLIPQ9H0E2 274 aa13.12□□□□□ -0.31
LINC00240-203ENST00000606878 ABCG5Q9H222 651 aa13.12□□□□□ -0.31
LINC00240-203ENST00000606878 NOTCH3Q9UM47 2321 aa13.11□□□□□ -0.31
LINC00240-203ENST00000606878 TRBV6-7A0A0A0MS04 114 aa13.11□□□□□ -0.31
LINC00240-203ENST00000606878 PSMB11A5LHX3 300 aa13.11□□□□□ -0.31
LINC00240-203ENST00000606878 OPN1MWP04001 364 aa13.11□□□□□ -0.31
LINC00240-203ENST00000606878 CT45A6P0DMU7 189 aa13.11□□□□□ -0.31
LINC00240-203ENST00000606878 CT45A5P0DMU8 189 aa13.11□□□□□ -0.31
LINC00240-203ENST00000606878 CT45A7P0DMV0 189 aa13.11□□□□□ -0.31
LINC00240-203ENST00000606878 OPN1MW2P0DN77 364 aa13.11□□□□□ -0.31
LINC00240-203ENST00000606878 OPN1MW3P0DN78 364 aa13.11□□□□□ -0.31
LINC00240-203ENST00000606878 DTYMKP23919 212 aa13.11□□□□□ -0.31
LINC00240-203ENST00000606878 RPS19P39019 145 aaKnown RBP13.11□□□□□ -0.31
LINC00240-203ENST00000606878 GPR12P47775 334 aa13.11□□□□□ -0.31
LINC00240-203ENST00000606878 ACTBP60709 375 aa13.11□□□□□ -0.31
LINC00240-203ENST00000606878 PNLIPRP3Q17RR3 467 aa13.11□□□□□ -0.31
LINC00240-203ENST00000606878 IGSF11Q5DX21 431 aa13.11□□□□□ -0.31
LINC00240-203ENST00000606878 OR4F17Q8NGA8 305 aa13.11□□□□□ -0.31
LINC00240-203ENST00000606878 OR5H6Q8NGV6 325 aa13.11□□□□□ -0.31
LINC00240-203ENST00000606878 MAFIPQ8WZ33 124 aa13.11□□□□□ -0.31
LINC00240-203ENST00000606878 OR4F4Q96R69 305 aa13.11□□□□□ -0.31
LINC00240-203ENST00000606878 DCSTAMPQ9H295 470 aa13.11□□□□□ -0.31
LINC00240-203ENST00000606878 DIABLOQ9NR28 239 aa13.11□□□□□ -0.31
LINC00240-203ENST00000606878 ELF5Q9UKW6 265 aaPredicted RBP13.11□□□□□ -0.31
LINC00240-203ENST00000606878 TET2Q6N021 2002 aaPredicted RBP13.11□□□□□ -0.31
LINC00240-203ENST00000606878 VWFP04275 2813 aa13.1□□□□□ -0.31
LINC00240-203ENST00000606878 TRAV18A0A075B6X5 111 aa13.1□□□□□ -0.31
LINC00240-203ENST00000606878 KCNAB3O43448 404 aa13.1□□□□□ -0.31
LINC00240-203ENST00000606878 CTXN2P0C2S0 81 aa13.1□□□□□ -0.31
LINC00240-203ENST00000606878 SOX6P35712 828 aa13.1□□□□□ -0.31
LINC00240-203ENST00000606878 GNG2P59768 71 aa13.1□□□□□ -0.31
LINC00240-203ENST00000606878 SLC35B1P78383 322 aa13.1□□□□□ -0.31
LINC00240-203ENST00000606878 MMDQ15546 238 aa13.1□□□□□ -0.31
LINC00240-203ENST00000606878 ZNF260Q3ZCT1 412 aa13.1□□□□□ -0.31
LINC00240-203ENST00000606878 RITA1Q96K30 269 aa13.1□□□□□ -0.31
LINC00240-203ENST00000606878 NOL4LQ96MY1 436 aaPredicted RBP13.1□□□□□ -0.31
LINC00240-203ENST00000606878 GINS4Q9BRT9 223 aa13.1□□□□□ -0.31
LINC00240-203ENST00000606878 CABLES2Q9BTV7 478 aa13.1□□□□□ -0.31
LINC00240-203ENST00000606878 GON7Q9BXV9 100 aa13.1□□□□□ -0.31
LINC00240-203ENST00000606878 SPATA2Q9UM82 520 aa13.1□□□□□ -0.31
LINC00240-203ENST00000606878 TSSC4Q9Y5U2 329 aaPredicted RBP13.1□□□□□ -0.31
LINC00240-203ENST00000606878 A0A0A6YYH2 397 aa13.09□□□□□ -0.31
LINC00240-203ENST00000606878 TMEM235A6NFC5 223 aa13.09□□□□□ -0.31
LINC00240-203ENST00000606878 OR5H14A6NHG9 310 aa13.09□□□□□ -0.31
LINC00240-203ENST00000606878 A6NJ64 397 aa13.09□□□□□ -0.31
LINC00240-203ENST00000606878 LINC01548A6NM66 108 aa13.09□□□□□ -0.31
LINC00240-203ENST00000606878 H7C2Y5 167 aa13.09□□□□□ -0.31
LINC00240-203ENST00000606878 AP4M1O00189 453 aa13.09□□□□□ -0.31
LINC00240-203ENST00000606878 OR8U9P0C7N5 309 aa13.09□□□□□ -0.31
LINC00240-203ENST00000606878 TGFBR1P36897 503 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms