RNA–Protein interactions for RNA: ENST00000606752.1

USP6NL-204, Transcript of USP6 N-terminal like, humanhuman

TSL 1 (best)

Gene USP6NL, Length 1,823 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-204ENST00000606752 CHODLQ9H9P2 273 aa17.8■□□□□ 0.44
USP6NL-204ENST00000606752 LIN7CQ9NUP9 197 aaKnown RBP17.8■□□□□ 0.44
USP6NL-204ENST00000606752 LRBAP50851 2863 aa17.8■□□□□ 0.44
USP6NL-204ENST00000606752 USP9XQ93008 2570 aaPredicted RBP17.79■□□□□ 0.44
USP6NL-204ENST00000606752 ARPC5O15511 151 aa17.79■□□□□ 0.44
USP6NL-204ENST00000606752 PPIHO43447 177 aaKnown RBP17.79■□□□□ 0.44
USP6NL-204ENST00000606752 F12P00748 615 aaPredicted RBP17.79■□□□□ 0.44
USP6NL-204ENST00000606752 TMEM33P57088 247 aa17.79■□□□□ 0.44
USP6NL-204ENST00000606752 EIF4EBP1Q13541 118 aaPredicted RBP17.79■□□□□ 0.44
USP6NL-204ENST00000606752 ZNF546Q86UE3 836 aa17.79■□□□□ 0.44
USP6NL-204ENST00000606752 C5orf30Q96GV9 206 aa17.79■□□□□ 0.44
USP6NL-204ENST00000606752 ZNF714Q96N38 554 aa17.79■□□□□ 0.44
USP6NL-204ENST00000606752 SDHAF2Q9NX18 166 aa17.79■□□□□ 0.44
USP6NL-204ENST00000606752 CXCL2P19875 107 aa17.79■□□□□ 0.44
USP6NL-204ENST00000606752 RAB7AP51149 207 aa17.79■□□□□ 0.44
USP6NL-204ENST00000606752 ZNF134P52741 427 aa17.79■□□□□ 0.44
USP6NL-204ENST00000606752 TLE4Q04727 773 aa17.79■□□□□ 0.44
USP6NL-204ENST00000606752 TMEM155Q4W5P6 130 aa17.79■□□□□ 0.44
USP6NL-204ENST00000606752 ZNF841Q6ZN19 808 aa17.79■□□□□ 0.44
USP6NL-204ENST00000606752 RPUSD1Q9UJJ7 312 aaKnown RBP17.79■□□□□ 0.44
USP6NL-204ENST00000606752 MYO18BQ8IUG5 2567 aa17.78■□□□□ 0.44
USP6NL-204ENST00000606752 MMP23AO75900 390 aa17.78■□□□□ 0.44
USP6NL-204ENST00000606752 ZNF16P17020 682 aaPredicted RBP17.78■□□□□ 0.44
USP6NL-204ENST00000606752 NFYBP25208 207 aa17.78■□□□□ 0.44
USP6NL-204ENST00000606752 SRSF1Q07955 248 aaKnown RBP eCLIP17.78■□□□□ 0.447e-7■■□□□ 13.1
USP6NL-204ENST00000606752 HEPN1Q6WQI6 88 aa17.78■□□□□ 0.44
USP6NL-204ENST00000606752 GON7Q9BXV9 100 aa17.78■□□□□ 0.44
USP6NL-204ENST00000606752 MIOXQ9UGB7 285 aa17.78■□□□□ 0.44
USP6NL-204ENST00000606752 FLNCQ14315 2725 aa17.78■□□□□ 0.44
USP6NL-204ENST00000606752 TRBV23-1A0A0A0MS06 115 aa17.77■□□□□ 0.44
USP6NL-204ENST00000606752 L7N2F9 121 aa17.77■□□□□ 0.44
USP6NL-204ENST00000606752 GPR37O15354 613 aa17.77■□□□□ 0.44
USP6NL-204ENST00000606752 IGHV3-7P01780 117 aa17.77■□□□□ 0.44
USP6NL-204ENST00000606752 VDAC1P21796 283 aa17.77■□□□□ 0.44
USP6NL-204ENST00000606752 GPR12P47775 334 aa17.77■□□□□ 0.44
USP6NL-204ENST00000606752 CATR1Q13166 79 aa17.77■□□□□ 0.44
USP6NL-204ENST00000606752 PRAMEF5Q5TYX0 476 aa17.77■□□□□ 0.44
USP6NL-204ENST00000606752 ZNF66Q6ZN08 573 aa17.77■□□□□ 0.44
USP6NL-204ENST00000606752 RNF126Q9BV68 326 aa17.77■□□□□ 0.44
USP6NL-204ENST00000606752 IFI27L2Q9H2X8 130 aa17.77■□□□□ 0.44
USP6NL-204ENST00000606752 RPA2P15927 270 aa17.77■□□□□ 0.43
USP6NL-204ENST00000606752 CCL3L1P16619 93 aa17.77■□□□□ 0.43
USP6NL-204ENST00000606752 C4BPBP20851 252 aa17.77■□□□□ 0.43
USP6NL-204ENST00000606752 SSTR2P30874 369 aa17.77■□□□□ 0.43
USP6NL-204ENST00000606752 EFNA4P52798 201 aa17.77■□□□□ 0.43
USP6NL-204ENST00000606752 RAB32Q13637 225 aa17.77■□□□□ 0.43
USP6NL-204ENST00000606752 CT45A1Q5HYN5 189 aa17.77■□□□□ 0.43
USP6NL-204ENST00000606752 UTF1Q5T230 341 aa17.77■□□□□ 0.43
USP6NL-204ENST00000606752 CT45A3Q8NHU0 189 aa17.77■□□□□ 0.43
USP6NL-204ENST00000606752 LEAP2Q969E1 77 aa17.77■□□□□ 0.43
USP6NL-204ENST00000606752 HSD17B10Q99714 261 aaKnown RBP17.77■□□□□ 0.43
USP6NL-204ENST00000606752 ABHD14AQ9BUJ0 271 aa17.77■□□□□ 0.43
USP6NL-204ENST00000606752 MFFQ9GZY8 342 aa17.77■□□□□ 0.43
USP6NL-204ENST00000606752 SLA2Q9H6Q3 261 aa17.77■□□□□ 0.43
USP6NL-204ENST00000606752 MBD2Q9UBB5 411 aa17.77■□□□□ 0.43
USP6NL-204ENST00000606752 GAB2Q9UQC2 676 aa17.77■□□□□ 0.43
USP6NL-204ENST00000606752 OVOL3O00110 214 aa17.76■□□□□ 0.43
USP6NL-204ENST00000606752 CLDN1O95832 211 aa17.76■□□□□ 0.43
USP6NL-204ENST00000606752 Q3ZCU0 254 aa17.76■□□□□ 0.43
USP6NL-204ENST00000606752 ZNF585BQ52M93 769 aa17.76■□□□□ 0.43
USP6NL-204ENST00000606752 ESCO2Q56NI9 601 aa17.76■□□□□ 0.43
USP6NL-204ENST00000606752 BTNL3Q6UXE8 466 aa17.76■□□□□ 0.43
USP6NL-204ENST00000606752 USF3Q68DE3 2245 aa17.76■□□□□ 0.43
USP6NL-204ENST00000606752 SLC31A2O15432 143 aa17.75■□□□□ 0.43
USP6NL-204ENST00000606752 NDUFS7O75251 213 aa17.75■□□□□ 0.43
USP6NL-204ENST00000606752 PET100P0DJ07 73 aa17.75■□□□□ 0.43
USP6NL-204ENST00000606752 RPL30P62888 115 aaKnown RBP17.75■□□□□ 0.43
USP6NL-204ENST00000606752 TCTEX1D1Q8N7M0 179 aa17.75■□□□□ 0.43
USP6NL-204ENST00000606752 ZNF439Q8NDP4 499 aa17.75■□□□□ 0.43
USP6NL-204ENST00000606752 OR8B3Q8NGG8 313 aa17.75■□□□□ 0.43
USP6NL-204ENST00000606752 NEIL1Q96FI4 390 aaPredicted RBP17.75■□□□□ 0.43
USP6NL-204ENST00000606752 OR8B2Q96RD0 313 aa17.75■□□□□ 0.43
USP6NL-204ENST00000606752 SPIN2AQ99865 258 aa17.75■□□□□ 0.43
USP6NL-204ENST00000606752 SPIN2BQ9BPZ2 258 aa17.75■□□□□ 0.43
USP6NL-204ENST00000606752 TNFSF18Q9UNG2 199 aa17.75■□□□□ 0.43
USP6NL-204ENST00000606752 COL12A1Q99715 3063 aa17.75■□□□□ 0.43
USP6NL-204ENST00000606752 H0YIZ8 118 aa17.75■□□□□ 0.43
USP6NL-204ENST00000606752 PROP1O75360 226 aa17.75■□□□□ 0.43
USP6NL-204ENST00000606752 NMSQ5H8A3 153 aa17.75■□□□□ 0.43
USP6NL-204ENST00000606752 PRSS54Q6PEW0 395 aa17.75■□□□□ 0.43
USP6NL-204ENST00000606752 FAM212BQ9NTI7 297 aaPredicted RBP17.75■□□□□ 0.43
USP6NL-204ENST00000606752 TSC22D2O75157 780 aa17.74■□□□□ 0.43
USP6NL-204ENST00000606752 IGKV1-39P01597 117 aa17.74■□□□□ 0.43
USP6NL-204ENST00000606752 IGKV1D-39P04432 117 aa17.74■□□□□ 0.43
USP6NL-204ENST00000606752 LYL1P12980 280 aa17.74■□□□□ 0.43
USP6NL-204ENST00000606752 DLX6P56179 175 aa17.74■□□□□ 0.43
USP6NL-204ENST00000606752 ERVFRD-1P60508 538 aa17.74■□□□□ 0.43
USP6NL-204ENST00000606752 TCTEX1D2Q8WW35 142 aa17.74■□□□□ 0.43
USP6NL-204ENST00000606752 RAB39BQ96DA2 213 aa17.74■□□□□ 0.43
USP6NL-204ENST00000606752 CLEC18AA5D8T8 446 aa17.73■□□□□ 0.43
USP6NL-204ENST00000606752 S100A10P60903 97 aa17.73■□□□□ 0.43
USP6NL-204ENST00000606752 ZNF436-AS1Q8NC38 126 aaPredicted RBP17.73■□□□□ 0.43
USP6NL-204ENST00000606752 CLEC18CQ8NCF0 446 aa17.73■□□□□ 0.43
USP6NL-204ENST00000606752 A0A1W2PPE3 182 aa17.72■□□□□ 0.43
USP6NL-204ENST00000606752 RGS13O14921 159 aa17.72■□□□□ 0.43
USP6NL-204ENST00000606752 RAB29O14966 203 aa17.72■□□□□ 0.43
USP6NL-204ENST00000606752 S100A11P31949 105 aa17.72■□□□□ 0.43
USP6NL-204ENST00000606752 DUTP33316 252 aaKnown RBP17.72■□□□□ 0.43
USP6NL-204ENST00000606752 LPAR6P43657 344 aa17.72■□□□□ 0.43
USP6NL-204ENST00000606752 OPCMLQ14982 345 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms