RNA–Protein interactions for RNA: ENST00000601912.5

VRK3-225, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VRK3, Length 1,668 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-225ENST00000601912 GLYATL2Q8WU03 294 aa14.79□□□□□ -0.04
VRK3-225ENST00000601912 LEAP2Q969E1 77 aa14.79□□□□□ -0.04
VRK3-225ENST00000601912 MARVELD3Q96A59 401 aa14.79□□□□□ -0.04
VRK3-225ENST00000601912 PERPQ96FX8 193 aa14.79□□□□□ -0.04
VRK3-225ENST00000601912 ABHD14BQ96IU4 210 aa14.79□□□□□ -0.04
VRK3-225ENST00000601912 TP53RKQ96S44 253 aa14.79□□□□□ -0.04
VRK3-225ENST00000601912 GPHA2Q96T91 129 aa14.79□□□□□ -0.04
VRK3-225ENST00000601912 GSX2Q9BZM3 304 aa14.79□□□□□ -0.04
VRK3-225ENST00000601912 TMEM222Q9H0R3 208 aa14.79□□□□□ -0.04
VRK3-225ENST00000601912 METTL8Q9H825 291 aaKnown RBP14.79□□□□□ -0.04
VRK3-225ENST00000601912 PIGBOS1A0A0B4J2F0 54 aa14.78□□□□□ -0.04
VRK3-225ENST00000601912 C17orf98A8MV24 154 aa14.78□□□□□ -0.04
VRK3-225ENST00000601912 H0Y980 276 aa14.78□□□□□ -0.04
VRK3-225ENST00000601912 OR2A4O95047 310 aa14.78□□□□□ -0.04
VRK3-225ENST00000601912 SIX6O95475 246 aa14.78□□□□□ -0.04
VRK3-225ENST00000601912 IGHV2-5P01817 119 aa14.78□□□□□ -0.04
VRK3-225ENST00000601912 ZNF134P52741 427 aa14.78□□□□□ -0.04
VRK3-225ENST00000601912 H2BFSP57053 126 aa14.78□□□□□ -0.04
VRK3-225ENST00000601912 RAP2BP61225 183 aa14.78□□□□□ -0.04
VRK3-225ENST00000601912 ZFP69Q49AA0 526 aa14.78□□□□□ -0.04
VRK3-225ENST00000601912 CT45A1Q5HYN5 189 aa14.78□□□□□ -0.04
VRK3-225ENST00000601912 LY6G5BQ8NDX9 201 aa14.78□□□□□ -0.04
VRK3-225ENST00000601912 OR51H1Q8NH63 302 aa14.78□□□□□ -0.04
VRK3-225ENST00000601912 CT45A3Q8NHU0 189 aa14.78□□□□□ -0.04
VRK3-225ENST00000601912 OR2A7Q96R45 310 aa14.78□□□□□ -0.04
VRK3-225ENST00000601912 PDCD10Q9BUL8 212 aa14.78□□□□□ -0.04
VRK3-225ENST00000601912 LIN7CQ9NUP9 197 aaKnown RBP14.78□□□□□ -0.04
VRK3-225ENST00000601912 SDHAF2Q9NX18 166 aa14.78□□□□□ -0.04
VRK3-225ENST00000601912 SPG11Q96JI7 2443 aa14.78□□□□□ -0.04
VRK3-225ENST00000601912 FAM25EA8MYX2 175 aa14.77□□□□□ -0.04
VRK3-225ENST00000601912 IFNA21P01568 189 aa14.77□□□□□ -0.04
VRK3-225ENST00000601912 RBP4P02753 201 aa14.77□□□□□ -0.04
VRK3-225ENST00000601912 IGHV1-8P0DP01 117 aa14.77□□□□□ -0.04
VRK3-225ENST00000601912 GNG10P50151 68 aa14.77□□□□□ -0.04
VRK3-225ENST00000601912 DSCR9P59020 149 aa14.77□□□□□ -0.04
VRK3-225ENST00000601912 ERVFRD-1P60508 538 aa14.77□□□□□ -0.04
VRK3-225ENST00000601912 CATR1Q13166 79 aa14.77□□□□□ -0.04
VRK3-225ENST00000601912 GSG1LQ6UXU4 331 aa14.77□□□□□ -0.04
VRK3-225ENST00000601912 LRTM2Q8N967 370 aa14.77□□□□□ -0.04
VRK3-225ENST00000601912 ZNF439Q8NDP4 499 aa14.77□□□□□ -0.04
VRK3-225ENST00000601912 C10orf105Q8TEF2 133 aa14.77□□□□□ -0.04
VRK3-225ENST00000601912 MSI2Q96DH6 328 aaKnown RBP14.77□□□□□ -0.04
VRK3-225ENST00000601912 IFI27L2Q9H2X8 130 aa14.77□□□□□ -0.04
VRK3-225ENST00000601912 GAB2Q9UQC2 676 aa14.77□□□□□ -0.04
VRK3-225ENST00000601912 ARID1AO14497 2285 aa14.77□□□□□ -0.04
VRK3-225ENST00000601912 C5orf51A6NDU8 294 aa14.77□□□□□ -0.05
VRK3-225ENST00000601912 C22orf46C9J442 243 aa14.77□□□□□ -0.05
VRK3-225ENST00000601912 CCSO14618 274 aa14.77□□□□□ -0.05
VRK3-225ENST00000601912 RAB29O14966 203 aa14.77□□□□□ -0.05
VRK3-225ENST00000601912 SERPINE2P07093 398 aa14.77□□□□□ -0.05
VRK3-225ENST00000601912 HOXB5P09067 269 aa14.77□□□□□ -0.05
VRK3-225ENST00000601912 ZNF16P17020 682 aaPredicted RBP14.77□□□□□ -0.05
VRK3-225ENST00000601912 EIF2B2P49770 351 aaKnown RBP14.77□□□□□ -0.05
VRK3-225ENST00000601912 ZNF66Q6ZN08 573 aa14.77□□□□□ -0.05
VRK3-225ENST00000601912 ZNF695Q8IW36 515 aa14.77□□□□□ -0.05
VRK3-225ENST00000601912 ZNF436-AS1Q8NC38 126 aaPredicted RBP14.77□□□□□ -0.05
VRK3-225ENST00000601912 CLDND2Q8NHS1 167 aa14.77□□□□□ -0.05
VRK3-225ENST00000601912 HSD17B10Q99714 261 aaKnown RBP14.77□□□□□ -0.05
VRK3-225ENST00000601912 PIPOXQ9P0Z9 390 aa14.77□□□□□ -0.05
VRK3-225ENST00000601912 SESN1Q9Y6P5 492 aa14.77□□□□□ -0.05
VRK3-225ENST00000601912 DOPEY2Q9Y3R5 2298 aa14.76□□□□□ -0.05
VRK3-225ENST00000601912 C13orf42A0A1B0GVH6 325 aa14.76□□□□□ -0.05
VRK3-225ENST00000601912 A0A1W2PPE3 182 aa14.76□□□□□ -0.05
VRK3-225ENST00000601912 SLC31A2O15432 143 aa14.76□□□□□ -0.05
VRK3-225ENST00000601912 UCP1P25874 307 aa14.76□□□□□ -0.05
VRK3-225ENST00000601912 DCAF12L2Q5VW00 463 aa14.76□□□□□ -0.05
VRK3-225ENST00000601912 SLC25A48Q6ZT89 311 aaKnown RBP14.76□□□□□ -0.05
VRK3-225ENST00000601912 OR2T35Q8NGX2 323 aa14.76□□□□□ -0.05
VRK3-225ENST00000601912 TMEM56Q96MV1 263 aa14.76□□□□□ -0.05
VRK3-225ENST00000601912 ONECUT1Q9UBC0 465 aa14.76□□□□□ -0.05
VRK3-225ENST00000601912 TMEM56-RWDD3S4R434 201 aa14.76□□□□□ -0.05
VRK3-225ENST00000601912 A0A087X0M5 115 aa14.75□□□□□ -0.05
VRK3-225ENST00000601912 A0A1B0GX30 115 aa14.75□□□□□ -0.05
VRK3-225ENST00000601912 ADAP1O75689 374 aa14.75□□□□□ -0.05
VRK3-225ENST00000601912 CDS2O95674 445 aa14.75□□□□□ -0.05
VRK3-225ENST00000601912 C1QBP02746 253 aa14.75□□□□□ -0.05
VRK3-225ENST00000601912 UTF1Q5T230 341 aa14.75□□□□□ -0.05
VRK3-225ENST00000601912 BTNL3Q6UXE8 466 aa14.75□□□□□ -0.05
VRK3-225ENST00000601912 LYG1Q8N1E2 194 aa14.75□□□□□ -0.05
VRK3-225ENST00000601912 C11orf42Q8N5U0 333 aa14.75□□□□□ -0.05
VRK3-225ENST00000601912 C8orf31Q8N9H6 132 aa14.75□□□□□ -0.05
VRK3-225ENST00000601912 RANBP3Q9H6Z4 567 aaPredicted RBP14.75□□□□□ -0.05
VRK3-225ENST00000601912 LMO4P61968 165 aa14.74□□□□□ -0.05
VRK3-225ENST00000601912 CYCSP99999 105 aaKnown RBP14.74□□□□□ -0.05
VRK3-225ENST00000601912 EIF4EBP1Q13541 118 aaPredicted RBP14.74□□□□□ -0.05
VRK3-225ENST00000601912 TMEM268Q5VZI3 342 aa14.74□□□□□ -0.05
VRK3-225ENST00000601912 TCTEX1D1Q8N7M0 179 aa14.74□□□□□ -0.05
VRK3-225ENST00000601912 IL22RA2Q969J5 263 aa14.74□□□□□ -0.05
VRK3-225ENST00000601912 C5orf30Q96GV9 206 aa14.74□□□□□ -0.05
VRK3-225ENST00000601912 C18orf12Q96KH6 178 aa14.74□□□□□ -0.05
VRK3-225ENST00000601912 TMEM133Q9H2Q1 129 aa14.74□□□□□ -0.05
VRK3-225ENST00000601912 CRYBG3Q68DQ2 2970 aa14.74□□□□□ -0.05
VRK3-225ENST00000601912 TENM4Q6N022 2769 aa14.74□□□□□ -0.05
VRK3-225ENST00000601912 HELZ2Q9BYK8 2649 aaKnown RBP14.74□□□□□ -0.05
VRK3-225ENST00000601912 SMLR1H3BR10 107 aa14.74□□□□□ -0.05
VRK3-225ENST00000601912 M0R1X1 148 aa14.74□□□□□ -0.05
VRK3-225ENST00000601912 ENSAO43768 121 aaKnown RBP14.74□□□□□ -0.05
VRK3-225ENST00000601912 KRTAP10-9P60411 292 aa14.74□□□□□ -0.05
VRK3-225ENST00000601912 SRSF4Q08170 494 aaKnown RBP14.74□□□□□ -0.05
VRK3-225ENST00000601912 NOXA1Q86UR1 476 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms