RNA–Protein interactions for RNA: ENST00000585163.5

CDK5RAP3-237, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,519 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-237ENST00000585163 FGFRL1Q8N441 504 aa11.98□□□□□ -0.49
CDK5RAP3-237ENST00000585163 FAM210BQ96KR6 192 aa11.98□□□□□ -0.49
CDK5RAP3-237ENST00000585163 VAX2Q9UIW0 290 aa11.98□□□□□ -0.49
CDK5RAP3-237ENST00000585163 R4GN57 208 aa11.98□□□□□ -0.49
CDK5RAP3-237ENST00000585163 WDFY4Q6ZS81 3184 aa11.98□□□□□ -0.49
CDK5RAP3-237ENST00000585163 MUC3AQ02505 3323 aa11.98□□□□□ -0.49
CDK5RAP3-237ENST00000585163 SEC14L6B5MCN3 397 aa11.98□□□□□ -0.49
CDK5RAP3-237ENST00000585163 C21orf140B9A014 251 aa11.98□□□□□ -0.49
CDK5RAP3-237ENST00000585163 J3QW42 95 aa11.98□□□□□ -0.49
CDK5RAP3-237ENST00000585163 PMS2P11Q13670 270 aa11.98□□□□□ -0.49
CDK5RAP3-237ENST00000585163 C1orf87Q8N0U7 546 aa11.98□□□□□ -0.49
CDK5RAP3-237ENST00000585163 DMRT1Q9Y5R6 373 aa11.98□□□□□ -0.49
CDK5RAP3-237ENST00000585163 MAP1LC3B2A6NCE7 125 aa11.97□□□□□ -0.49
CDK5RAP3-237ENST00000585163 PGA5P0DJD9 388 aa11.97□□□□□ -0.49
CDK5RAP3-237ENST00000585163 MEOX1P50221 254 aa11.97□□□□□ -0.49
CDK5RAP3-237ENST00000585163 LPAL2Q16609 132 aa11.97□□□□□ -0.49
CDK5RAP3-237ENST00000585163 TBC1D28Q2M2D7 210 aa11.97□□□□□ -0.49
CDK5RAP3-237ENST00000585163 TAF15Q92804 592 aaKnown RBP eCLIP11.97□□□□□ -0.49
CDK5RAP3-237ENST00000585163 MAP1LC3BQ9GZQ8 125 aa11.97□□□□□ -0.49
CDK5RAP3-237ENST00000585163 FRYQ5TBA9 3013 aa11.97□□□□□ -0.49
CDK5RAP3-237ENST00000585163 A0A1W2PNU3 283 aaPredicted RBP11.97□□□□□ -0.49
CDK5RAP3-237ENST00000585163 RNF212BA8MTL3 300 aa11.97□□□□□ -0.49
CDK5RAP3-237ENST00000585163 SP1P08047 785 aa11.97□□□□□ -0.49
CDK5RAP3-237ENST00000585163 RPP30P78346 268 aaKnown RBP11.97□□□□□ -0.49
CDK5RAP3-237ENST00000585163 CFAP161Q6P656 301 aa11.97□□□□□ -0.49
CDK5RAP3-237ENST00000585163 TMEM14EPQ6UXP3 125 aa11.97□□□□□ -0.49
CDK5RAP3-237ENST00000585163 CDX2Q99626 313 aaPredicted RBP11.97□□□□□ -0.49
CDK5RAP3-237ENST00000585163 CEBPZOSA8MTT3 80 aa11.96□□□□□ -0.49
CDK5RAP3-237ENST00000585163 CDIPTO14735 213 aa11.96□□□□□ -0.49
CDK5RAP3-237ENST00000585163 SH2D1BO14796 132 aa11.96□□□□□ -0.49
CDK5RAP3-237ENST00000585163 NXPH2O95156 264 aa11.96□□□□□ -0.49
CDK5RAP3-237ENST00000585163 IFNA1P01562 189 aa11.96□□□□□ -0.49
CDK5RAP3-237ENST00000585163 NKX6-1P78426 367 aaPredicted RBP11.96□□□□□ -0.49
CDK5RAP3-237ENST00000585163 TNFRSF9Q07011 255 aa11.96□□□□□ -0.49
CDK5RAP3-237ENST00000585163 SLC38A11Q08AI6 406 aa11.96□□□□□ -0.49
CDK5RAP3-237ENST00000585163 VASH2Q86V25 355 aa11.96□□□□□ -0.49
CDK5RAP3-237ENST00000585163 ABHD5Q8WTS1 349 aa11.96□□□□□ -0.49
CDK5RAP3-237ENST00000585163 KLF13Q9Y2Y9 288 aaPredicted RBP11.96□□□□□ -0.49
CDK5RAP3-237ENST00000585163 TIMM9Q9Y5J7 89 aa11.96□□□□□ -0.49
CDK5RAP3-237ENST00000585163 TRBV24-1A0A075B6N3 115 aa11.96□□□□□ -0.5
CDK5RAP3-237ENST00000585163 ELOA3CA0A087WX78 387 aaPredicted RBP11.96□□□□□ -0.5
CDK5RAP3-237ENST00000585163 UBE2L5PA0A1B0GUS4 154 aa11.96□□□□□ -0.5
CDK5RAP3-237ENST00000585163 PPP1R2P9O14990 202 aa11.96□□□□□ -0.5
CDK5RAP3-237ENST00000585163 TGOLN2O43493 480 aa11.96□□□□□ -0.5
CDK5RAP3-237ENST00000585163 SMPD2O60906 423 aa11.96□□□□□ -0.5
CDK5RAP3-237ENST00000585163 ZNF883P0CG24 379 aa11.96□□□□□ -0.5
CDK5RAP3-237ENST00000585163 ELLP55199 621 aaPredicted RBP11.96□□□□□ -0.5
CDK5RAP3-237ENST00000585163 SLC10A1Q14973 349 aa11.96□□□□□ -0.5
CDK5RAP3-237ENST00000585163 TMEM95Q3KNT9 176 aa11.96□□□□□ -0.5
CDK5RAP3-237ENST00000585163 WDR25Q64LD2 544 aaPredicted RBP11.96□□□□□ -0.5
CDK5RAP3-237ENST00000585163 CENPVQ7Z7K6 275 aaPredicted RBP11.96□□□□□ -0.5
CDK5RAP3-237ENST00000585163 MYPOPQ86VE0 399 aaPredicted RBP11.96□□□□□ -0.5
CDK5RAP3-237ENST00000585163 RPP25LQ8N5L8 163 aaKnown RBP11.96□□□□□ -0.5
CDK5RAP3-237ENST00000585163 OR2J1Q9GZK6 312 aa11.96□□□□□ -0.5
CDK5RAP3-237ENST00000585163 RBKSQ9H477 322 aa11.96□□□□□ -0.5
CDK5RAP3-237ENST00000585163 CHD3Q12873 2000 aaKnown RBP11.95□□□□□ -0.5
CDK5RAP3-237ENST00000585163 KLRC4-KLRK1H3BQV0 150 aa11.95□□□□□ -0.5
CDK5RAP3-237ENST00000585163 SOD3P08294 240 aa11.95□□□□□ -0.5
CDK5RAP3-237ENST00000585163 TRGC1P0CF51 173 aa11.95□□□□□ -0.5
CDK5RAP3-237ENST00000585163 PPP1CBP62140 327 aa11.95□□□□□ -0.5
CDK5RAP3-237ENST00000585163 HIST3H2BBQ8N257 126 aa11.95□□□□□ -0.5
CDK5RAP3-237ENST00000585163 MDS2Q8NDY4 140 aa11.95□□□□□ -0.5
CDK5RAP3-237ENST00000585163 FRZBQ92765 325 aa11.95□□□□□ -0.5
CDK5RAP3-237ENST00000585163 CTDSP1Q9GZU7 261 aa11.95□□□□□ -0.5
CDK5RAP3-237ENST00000585163 HSPB7Q9UBY9 170 aa11.95□□□□□ -0.5
CDK5RAP3-237ENST00000585163 FAM186AA6NE01 2351 aa11.95□□□□□ -0.5
CDK5RAP3-237ENST00000585163 ZNF737O75373 536 aa11.95□□□□□ -0.5
CDK5RAP3-237ENST00000585163 CLDN1O95832 211 aa11.95□□□□□ -0.5
CDK5RAP3-237ENST00000585163 IGKV1D-33P01593 117 aa11.95□□□□□ -0.5
CDK5RAP3-237ENST00000585163 IGKV1-33P01594 117 aa11.95□□□□□ -0.5
CDK5RAP3-237ENST00000585163 OPN1MWP04001 364 aa11.95□□□□□ -0.5
CDK5RAP3-237ENST00000585163 CELA3BP08861 270 aa11.95□□□□□ -0.5
CDK5RAP3-237ENST00000585163 OPN1MW2P0DN77 364 aa11.95□□□□□ -0.5
CDK5RAP3-237ENST00000585163 OPN1MW3P0DN78 364 aa11.95□□□□□ -0.5
CDK5RAP3-237ENST00000585163 GFI1BQ5VTD9 330 aa11.95□□□□□ -0.5
CDK5RAP3-237ENST00000585163 ZNF645Q8N7E2 425 aa11.95□□□□□ -0.5
CDK5RAP3-237ENST00000585163 ZBTB34Q8NCN2 500 aa11.95□□□□□ -0.5
CDK5RAP3-237ENST00000585163 SLC39A9Q9NUM3 307 aa11.95□□□□□ -0.5
CDK5RAP3-237ENST00000585163 MED13Q9UHV7 2174 aa11.95□□□□□ -0.5
CDK5RAP3-237ENST00000585163 COL6A3P12111 3177 aa11.94□□□□□ -0.5
CDK5RAP3-237ENST00000585163 PHOX2AO14813 284 aa11.94□□□□□ -0.5
CDK5RAP3-237ENST00000585163 RAMP3O60896 148 aa11.94□□□□□ -0.5
CDK5RAP3-237ENST00000585163 P0C879 139 aa11.94□□□□□ -0.5
CDK5RAP3-237ENST00000585163 MRPL49Q13405 166 aaKnown RBP11.94□□□□□ -0.5
CDK5RAP3-237ENST00000585163 ZNF766Q5HY98 468 aa11.94□□□□□ -0.5
CDK5RAP3-237ENST00000585163 TMEM164Q5U3C3 297 aa11.94□□□□□ -0.5
CDK5RAP3-237ENST00000585163 OR8G2PQ6IF36 304 aa11.94□□□□□ -0.5
CDK5RAP3-237ENST00000585163 LHX4Q969G2 390 aa11.94□□□□□ -0.5
CDK5RAP3-237ENST00000585163 WDYHV1Q96HA8 205 aa11.94□□□□□ -0.5
CDK5RAP3-237ENST00000585163 SSX3Q99909 188 aa11.94□□□□□ -0.5
CDK5RAP3-237ENST00000585163 AGMATQ9BSE5 352 aa11.94□□□□□ -0.5
CDK5RAP3-237ENST00000585163 GPR61Q9BZJ8 451 aa11.94□□□□□ -0.5
CDK5RAP3-237ENST00000585163 TRBV23-1A0A0A0MS06 115 aa11.94□□□□□ -0.5
CDK5RAP3-237ENST00000585163 CD81P60033 236 aa11.94□□□□□ -0.5
CDK5RAP3-237ENST00000585163 ERVS71-1P61550 626 aa11.94□□□□□ -0.5
CDK5RAP3-237ENST00000585163 MEF2BQ02080 365 aaPredicted RBP11.94□□□□□ -0.5
CDK5RAP3-237ENST00000585163 ALKBH6Q3KRA9 238 aa11.94□□□□□ -0.5
CDK5RAP3-237ENST00000585163 OR2B11Q5JQS5 317 aa11.94□□□□□ -0.5
CDK5RAP3-237ENST00000585163 OR10D4PQ8NGN7 298 aa11.94□□□□□ -0.5
CDK5RAP3-237ENST00000585163 UFSP2Q9NUQ7 469 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms