RNA–Protein interactions for RNA: ENST00000584083.5

SS18-224, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 663 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-224ENST00000584083 SLC2A2P11168 524 aaPredicted RBP16.13■□□□□ 0.17
SS18-224ENST00000584083 PDLIM3Q53GG5 364 aaPredicted RBP16.13■□□□□ 0.17
SS18-224ENST00000584083 NR2C2APQ86WQ0 139 aa16.13■□□□□ 0.17
SS18-224ENST00000584083 OR10R2Q8NGX6 335 aa16.13■□□□□ 0.17
SS18-224ENST00000584083 PARP12Q9H0J9 701 aaKnown RBP16.13■□□□□ 0.17
SS18-224ENST00000584083 TRDCB7Z8K6 153 aa16.12■□□□□ 0.17
SS18-224ENST00000584083 GNB3P16520 340 aa16.12■□□□□ 0.17
SS18-224ENST00000584083 MMDQ15546 238 aa16.12■□□□□ 0.17
SS18-224ENST00000584083 NEDD8Q15843 81 aa16.12■□□□□ 0.17
SS18-224ENST00000584083 STPG2Q8N412 459 aa16.12■□□□□ 0.17
SS18-224ENST00000584083 EDARADDQ8WWZ3 215 aa16.12■□□□□ 0.17
SS18-224ENST00000584083 ABHD14BQ96IU4 210 aa16.12■□□□□ 0.17
SS18-224ENST00000584083 ATG5Q9H1Y0 275 aa16.12■□□□□ 0.17
SS18-224ENST00000584083 OR51E2Q9H255 320 aa16.12■□□□□ 0.17
SS18-224ENST00000584083 KCNK7Q9Y2U2 307 aa16.12■□□□□ 0.17
SS18-224ENST00000584083 NOTCH3Q9UM47 2321 aa16.12■□□□□ 0.17
SS18-224ENST00000584083 NOTOA8MTQ0 251 aa16.11■□□□□ 0.17
SS18-224ENST00000584083 ITGB1BP1O14713 200 aa16.11■□□□□ 0.17
SS18-224ENST00000584083 PF4P02776 101 aa16.11■□□□□ 0.17
SS18-224ENST00000584083 SOX6P35712 828 aa16.11■□□□□ 0.17
SS18-224ENST00000584083 ACTBP60709 375 aa16.11■□□□□ 0.17
SS18-224ENST00000584083 KCTD21Q4G0X4 260 aa16.11■□□□□ 0.17
SS18-224ENST00000584083 RPL39P5Q59GN2 51 aa16.11■□□□□ 0.17
SS18-224ENST00000584083 FAM71F2Q6NXP2 309 aa16.11■□□□□ 0.17
SS18-224ENST00000584083 TPRA1Q86W33 373 aa16.11■□□□□ 0.17
SS18-224ENST00000584083 FAM71E2Q8N5Q1 922 aa16.11■□□□□ 0.17
SS18-224ENST00000584083 ZNF251Q9BRH9 671 aa16.11■□□□□ 0.17
SS18-224ENST00000584083 C11orf54Q9H0W9 315 aaPredicted RBP16.11■□□□□ 0.17
SS18-224ENST00000584083 RAB27BO00194 218 aa16.1■□□□□ 0.17
SS18-224ENST00000584083 HIST1H1DP16402 221 aaKnown RBP16.1■□□□□ 0.17
SS18-224ENST00000584083 CD33P20138 364 aa16.1■□□□□ 0.17
SS18-224ENST00000584083 ARFRP1Q13795 201 aa16.1■□□□□ 0.17
SS18-224ENST00000584083 SAMD5Q5TGI4 173 aa16.1■□□□□ 0.17
SS18-224ENST00000584083 COMMD1Q8N668 190 aa16.1■□□□□ 0.17
SS18-224ENST00000584083 PTX4Q96A99 478 aa16.1■□□□□ 0.17
SS18-224ENST00000584083 PHF21AQ96BD5 680 aa16.1■□□□□ 0.17
SS18-224ENST00000584083 KCTD7Q96MP8 289 aa16.1■□□□□ 0.17
SS18-224ENST00000584083 HSPB9Q9BQS6 159 aa16.1■□□□□ 0.17
SS18-224ENST00000584083 CHCHD6Q9BRQ6 235 aa16.1■□□□□ 0.17
SS18-224ENST00000584083 GON7Q9BXV9 100 aa16.1■□□□□ 0.17
SS18-224ENST00000584083 GHITMQ9H3K2 345 aa16.1■□□□□ 0.17
SS18-224ENST00000584083 RNF150Q9ULK6 438 aa16.1■□□□□ 0.17
SS18-224ENST00000584083 LOC100506127A0A0U1RQW1 187 aa16.09■□□□□ 0.17
SS18-224ENST00000584083 MFNGO00587 321 aa16.09■□□□□ 0.17
SS18-224ENST00000584083 RRP9O43818 475 aaKnown RBP16.09■□□□□ 0.17
SS18-224ENST00000584083 FCGR3AP08637 254 aa16.09■□□□□ 0.17
SS18-224ENST00000584083 TALDO1P37837 337 aa16.09■□□□□ 0.17
SS18-224ENST00000584083 OXLD1Q5BKU9 147 aa16.09■□□□□ 0.17
SS18-224ENST00000584083 FAM131AQ6UXB0 335 aa16.09■□□□□ 0.17
SS18-224ENST00000584083 OR4A4PQ8NGN8 299 aa16.09■□□□□ 0.17
SS18-224ENST00000584083 RITA1Q96K30 269 aa16.09■□□□□ 0.17
SS18-224ENST00000584083 ZNF107Q9UII5 783 aaPredicted RBP16.09■□□□□ 0.17
SS18-224ENST00000584083 DAPK2Q9UIK4 370 aa16.09■□□□□ 0.17
SS18-224ENST00000584083 ZNF221Q9UK13 617 aa16.09■□□□□ 0.17
SS18-224ENST00000584083 IGKV1-6A0A0C4DH72 117 aa16.08■□□□□ 0.16
SS18-224ENST00000584083 NUDT19A8MXV4 375 aa16.08■□□□□ 0.16
SS18-224ENST00000584083 FABP7O15540 132 aa16.08■□□□□ 0.16
SS18-224ENST00000584083 CD36P16671 472 aa16.08■□□□□ 0.16
SS18-224ENST00000584083 CNTFRP26992 372 aa16.08■□□□□ 0.16
SS18-224ENST00000584083 SDC2P34741 201 aa16.08■□□□□ 0.16
SS18-224ENST00000584083 SERPINB10P48595 397 aa16.08■□□□□ 0.16
SS18-224ENST00000584083 RPL23AP62750 156 aaKnown RBP16.08■□□□□ 0.16
SS18-224ENST00000584083 MXD1Q05195 221 aa16.08■□□□□ 0.16
SS18-224ENST00000584083 KIR2DS1Q14954 304 aa16.08■□□□□ 0.16
SS18-224ENST00000584083 BEAN1Q3B7T3 259 aa16.08■□□□□ 0.16
SS18-224ENST00000584083 TEX38Q6PEX7 206 aa16.08■□□□□ 0.16
SS18-224ENST00000584083 GLDNQ6ZMI3 551 aaPredicted RBP16.08■□□□□ 0.16
SS18-224ENST00000584083 AGMATQ9BSE5 352 aa16.08■□□□□ 0.16
SS18-224ENST00000584083 ZFP57Q9NU63 452 aa16.08■□□□□ 0.16
SS18-224ENST00000584083 RDH8Q9NYR8 311 aa16.08■□□□□ 0.16
SS18-224ENST00000584083 H7C2Y5 167 aa16.07■□□□□ 0.16
SS18-224ENST00000584083 BET1O15155 118 aa16.07■□□□□ 0.16
SS18-224ENST00000584083 NBR2O15453 112 aa16.07■□□□□ 0.16
SS18-224ENST00000584083 GSTT2P0CG29 244 aa16.07■□□□□ 0.16
SS18-224ENST00000584083 GSTT2BP0CG30 244 aa16.07■□□□□ 0.16
SS18-224ENST00000584083 CT45A6P0DMU7 189 aa16.07■□□□□ 0.16
SS18-224ENST00000584083 CT45A5P0DMU8 189 aa16.07■□□□□ 0.16
SS18-224ENST00000584083 CT45A7P0DMV0 189 aa16.07■□□□□ 0.16
SS18-224ENST00000584083 MC5RP33032 325 aa16.07■□□□□ 0.16
SS18-224ENST00000584083 PNLIPRP3Q17RR3 467 aa16.07■□□□□ 0.16
SS18-224ENST00000584083 MAFIPQ8WZ33 124 aa16.07■□□□□ 0.16
SS18-224ENST00000584083 KIAA1456Q9P272 454 aa16.07■□□□□ 0.16
SS18-224ENST00000584083 ZNF230Q9UIE0 474 aaPredicted RBP16.07■□□□□ 0.16
SS18-224ENST00000584083 OR5H14A6NHG9 310 aa16.06■□□□□ 0.16
SS18-224ENST00000584083 GSTP1P09211 210 aaKnown RBP16.06■□□□□ 0.16
SS18-224ENST00000584083 SNRPBP14678 240 aaKnown RBP16.06■□□□□ 0.16
SS18-224ENST00000584083 VDAC1P21796 283 aa16.06■□□□□ 0.16
SS18-224ENST00000584083 ARL6IP1Q15041 203 aa16.06■□□□□ 0.16
SS18-224ENST00000584083 IGSF11Q5DX21 431 aa16.06■□□□□ 0.16
SS18-224ENST00000584083 SFXN4Q6P4A7 337 aa16.06■□□□□ 0.16
SS18-224ENST00000584083 DRAXINQ8NBI3 349 aaPredicted RBP16.06■□□□□ 0.16
SS18-224ENST00000584083 OR10J5Q8NHC4 309 aa16.06■□□□□ 0.16
SS18-224ENST00000584083 RNF167Q9H6Y7 350 aa16.06■□□□□ 0.16
SS18-224ENST00000584083 WASHC3Q9Y3C0 194 aa16.06■□□□□ 0.16
SS18-224ENST00000584083 H0YJW9 148 aa16.05■□□□□ 0.16
SS18-224ENST00000584083 CLEC2LP0C7M8 214 aa16.05■□□□□ 0.16
SS18-224ENST00000584083 C5orf64Q2M2E5 130 aa16.05■□□□□ 0.16
SS18-224ENST00000584083 CDNFQ49AH0 187 aa16.05■□□□□ 0.16
SS18-224ENST00000584083 CXorf66Q5JRM2 361 aaPredicted RBP16.05■□□□□ 0.16
SS18-224ENST00000584083 KPRPQ5T749 579 aaPredicted RBP16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms