RNA–Protein interactions for RNA: ENST00000584074.5

PPP4R1-228, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 625 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-228ENST00000584074 PNLIPRP3Q17RR3 467 aa16.85■□□□□ 0.29
PPP4R1-228ENST00000584074 RPL39P5Q59GN2 51 aa16.85■□□□□ 0.29
PPP4R1-228ENST00000584074 TEX38Q6PEX7 206 aa16.85■□□□□ 0.29
PPP4R1-228ENST00000584074 LCNL1Q6ZST4 164 aa16.85■□□□□ 0.29
PPP4R1-228ENST00000584074 REC114Q7Z4M0 266 aa16.85■□□□□ 0.29
PPP4R1-228ENST00000584074 MRPL41Q8IXM3 137 aaKnown RBP16.85■□□□□ 0.29
PPP4R1-228ENST00000584074 SPARTQ8N0X7 666 aa16.85■□□□□ 0.29
PPP4R1-228ENST00000584074 LINC00482Q8N8I6 264 aa16.85■□□□□ 0.29
PPP4R1-228ENST00000584074 KLHL30-AS1Q8NEE0 82 aa16.85■□□□□ 0.29
PPP4R1-228ENST00000584074 ABHD14BQ96IU4 210 aa16.85■□□□□ 0.29
PPP4R1-228ENST00000584074 CMSS1Q9BQ75 279 aaKnown RBP16.85■□□□□ 0.29
PPP4R1-228ENST00000584074 GON7Q9BXV9 100 aa16.85■□□□□ 0.29
PPP4R1-228ENST00000584074 PIPOXQ9P0Z9 390 aa16.85■□□□□ 0.29
PPP4R1-228ENST00000584074 IFITM5A6NNB3 132 aa16.84■□□□□ 0.29
PPP4R1-228ENST00000584074 RAB29O14966 203 aa16.84■□□□□ 0.29
PPP4R1-228ENST00000584074 MRPS14O60783 128 aaKnown RBP16.84■□□□□ 0.29
PPP4R1-228ENST00000584074 RPLP1P05386 114 aaKnown RBP16.84■□□□□ 0.29
PPP4R1-228ENST00000584074 MYL9P24844 172 aa16.84■□□□□ 0.29
PPP4R1-228ENST00000584074 RANBP1P43487 201 aa16.84■□□□□ 0.29
PPP4R1-228ENST00000584074 MOGAT2Q3SYC2 334 aa16.84■□□□□ 0.29
PPP4R1-228ENST00000584074 UBE2UQ5VVX9 321 aa16.84■□□□□ 0.29
PPP4R1-228ENST00000584074 C22orf42Q6IC83 251 aa16.84■□□□□ 0.29
PPP4R1-228ENST00000584074 C11orf54Q9H0W9 315 aaPredicted RBP16.84■□□□□ 0.29
PPP4R1-228ENST00000584074 AURKAIP1Q9NWT8 199 aaPredicted RBP16.84■□□□□ 0.29
PPP4R1-228ENST00000584074 ZNF107Q9UII5 783 aaPredicted RBP16.84■□□□□ 0.29
PPP4R1-228ENST00000584074 MGAT4AQ9UM21 535 aa16.84■□□□□ 0.29
PPP4R1-228ENST00000584074 KCNK7Q9Y2U2 307 aa16.84■□□□□ 0.29
PPP4R1-228ENST00000584074 A0A0B4J203 849 aa16.83■□□□□ 0.28
PPP4R1-228ENST00000584074 HSPA12AO43301 675 aa16.83■□□□□ 0.28
PPP4R1-228ENST00000584074 RRP9O43818 475 aaKnown RBP16.83■□□□□ 0.28
PPP4R1-228ENST00000584074 CT45A6P0DMU7 189 aa16.83■□□□□ 0.28
PPP4R1-228ENST00000584074 CT45A5P0DMU8 189 aa16.83■□□□□ 0.28
PPP4R1-228ENST00000584074 CT45A7P0DMV0 189 aa16.83■□□□□ 0.28
PPP4R1-228ENST00000584074 ZBTB25P24278 435 aa16.83■□□□□ 0.28
PPP4R1-228ENST00000584074 THBS3P49746 956 aa16.83■□□□□ 0.28
PPP4R1-228ENST00000584074 CFHR3Q02985 330 aa16.83■□□□□ 0.28
PPP4R1-228ENST00000584074 FAM71F2Q6NXP2 309 aa16.83■□□□□ 0.28
PPP4R1-228ENST00000584074 FAM131AQ6UXB0 335 aa16.83■□□□□ 0.28
PPP4R1-228ENST00000584074 ZNF695Q8IW36 515 aa16.83■□□□□ 0.28
PPP4R1-228ENST00000584074 RCC1LQ96I51 464 aaKnown RBP16.83■□□□□ 0.28
PPP4R1-228ENST00000584074 AGMATQ9BSE5 352 aa16.83■□□□□ 0.28
PPP4R1-228ENST00000584074 IGKV1-6A0A0C4DH72 117 aa16.82■□□□□ 0.28
PPP4R1-228ENST00000584074 ITGB1BP1O14713 200 aa16.82■□□□□ 0.28
PPP4R1-228ENST00000584074 NBR2O15453 112 aa16.82■□□□□ 0.28
PPP4R1-228ENST00000584074 IGF1P05019 195 aa16.82■□□□□ 0.28
PPP4R1-228ENST00000584074 RAB3BP20337 219 aa16.82■□□□□ 0.28
PPP4R1-228ENST00000584074 VDAC1P21796 283 aa16.82■□□□□ 0.28
PPP4R1-228ENST00000584074 PSMB9P28065 219 aa16.82■□□□□ 0.28
PPP4R1-228ENST00000584074 FOXE3Q13461 319 aa16.82■□□□□ 0.28
PPP4R1-228ENST00000584074 GLDNQ6ZMI3 551 aaPredicted RBP16.82■□□□□ 0.28
PPP4R1-228ENST00000584074 NR2C2APQ86WQ0 139 aa16.82■□□□□ 0.28
PPP4R1-228ENST00000584074 RAB3CQ96E17 227 aa16.82■□□□□ 0.28
PPP4R1-228ENST00000584074 Q9H521 79 aa16.82■□□□□ 0.28
PPP4R1-228ENST00000584074 RNF150Q9ULK6 438 aa16.82■□□□□ 0.28
PPP4R1-228ENST00000584074 SMIM30A4D0T7 59 aa16.81■□□□□ 0.28
PPP4R1-228ENST00000584074 TRDCB7Z8K6 153 aa16.81■□□□□ 0.28
PPP4R1-228ENST00000584074 GALP22466 123 aa16.81■□□□□ 0.28
PPP4R1-228ENST00000584074 SLC6A1P30531 599 aa16.81■□□□□ 0.28
PPP4R1-228ENST00000584074 CXorf66Q5JRM2 361 aaPredicted RBP16.81■□□□□ 0.28
PPP4R1-228ENST00000584074 RNF152Q8N8N0 203 aa16.81■□□□□ 0.28
PPP4R1-228ENST00000584074 NPBQ8NG41 125 aa16.81■□□□□ 0.28
PPP4R1-228ENST00000584074 EDARADDQ8WWZ3 215 aa16.81■□□□□ 0.28
PPP4R1-228ENST00000584074 KCTD7Q96MP8 289 aa16.81■□□□□ 0.28
PPP4R1-228ENST00000584074 DUX3Q96PT4 197 aa16.81■□□□□ 0.28
PPP4R1-228ENST00000584074 IGHG4P01861 327 aa16.8■□□□□ 0.28
PPP4R1-228ENST00000584074 HLA-DRB1P01911 266 aa16.8■□□□□ 0.28
PPP4R1-228ENST00000584074 ELANEP08246 267 aa16.8■□□□□ 0.28
PPP4R1-228ENST00000584074 CD3GP09693 182 aa16.8■□□□□ 0.28
PPP4R1-228ENST00000584074 GNB3P16520 340 aa16.8■□□□□ 0.28
PPP4R1-228ENST00000584074 MYCNOSP40205 109 aa16.8■□□□□ 0.28
PPP4R1-228ENST00000584074 C5orf64Q2M2E5 130 aa16.8■□□□□ 0.28
PPP4R1-228ENST00000584074 OR10R2Q8NGX6 335 aa16.8■□□□□ 0.28
PPP4R1-228ENST00000584074 MRAPQ8TCY5 172 aa16.8■□□□□ 0.28
PPP4R1-228ENST00000584074 PTX4Q96A99 478 aa16.8■□□□□ 0.28
PPP4R1-228ENST00000584074 P2RX4Q99571 388 aa16.8■□□□□ 0.28
PPP4R1-228ENST00000584074 GHITMQ9H3K2 345 aa16.8■□□□□ 0.28
PPP4R1-228ENST00000584074 WSB1Q9Y6I7 421 aa16.8■□□□□ 0.28
PPP4R1-228ENST00000584074 A0A075B6Q4 140 aa16.79■□□□□ 0.28
PPP4R1-228ENST00000584074 H0YJW9 148 aa16.79■□□□□ 0.28
PPP4R1-228ENST00000584074 RAB27BO00194 218 aa16.79■□□□□ 0.28
PPP4R1-228ENST00000584074 PROP1O75360 226 aa16.79■□□□□ 0.28
PPP4R1-228ENST00000584074 RAB6AP20340 208 aa16.79■□□□□ 0.28
PPP4R1-228ENST00000584074 MRPS15P82914 257 aaKnown RBP16.79■□□□□ 0.28
PPP4R1-228ENST00000584074 LIN54Q6MZP7 749 aa16.79■□□□□ 0.28
PPP4R1-228ENST00000584074 RAX2Q96IS3 184 aa16.79■□□□□ 0.28
PPP4R1-228ENST00000584074 YTHDF1Q9BYJ9 559 aaKnown RBP16.79■□□□□ 0.28
PPP4R1-228ENST00000584074 OR51J1Q9H342 316 aa16.79■□□□□ 0.28
PPP4R1-228ENST00000584074 PARP11Q9NR21 331 aa16.79■□□□□ 0.28
PPP4R1-228ENST00000584074 TXNL4BQ9NX01 149 aaKnown RBP16.79■□□□□ 0.28
PPP4R1-228ENST00000584074 KIAA1456Q9P272 454 aa16.79■□□□□ 0.28
PPP4R1-228ENST00000584074 ZNF580Q9UK33 172 aa16.79■□□□□ 0.28
PPP4R1-228ENST00000584074 IGHV7-81A0A0B4J1V7 117 aa16.78■□□□□ 0.28
PPP4R1-228ENST00000584074 OR5H14A6NHG9 310 aa16.78■□□□□ 0.28
PPP4R1-228ENST00000584074 G3V318 75 aa16.78■□□□□ 0.28
PPP4R1-228ENST00000584074 H7C2Y5 167 aa16.78■□□□□ 0.28
PPP4R1-228ENST00000584074 MFNGO00587 321 aa16.78■□□□□ 0.28
PPP4R1-228ENST00000584074 ATP6V0E1O15342 81 aa16.78■□□□□ 0.28
PPP4R1-228ENST00000584074 NDUFA3O95167 84 aa16.78■□□□□ 0.28
PPP4R1-228ENST00000584074 DUS4LO95620 317 aaKnown RBP16.78■□□□□ 0.28
PPP4R1-228ENST00000584074 FCGR3AP08637 254 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms