RNA–Protein interactions for RNA: ENST00000579329.1

LIMD2-207, Transcript of LIM domain containing 2, humanhuman

TSL 1 (best)

Gene LIMD2, Length 920 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-207ENST00000579329 GHITMQ9H3K2 345 aa19.02■□□□□ 0.64
LIMD2-207ENST00000579329 IGKV1-6A0A0C4DH72 117 aa19.01■□□□□ 0.63
LIMD2-207ENST00000579329 RAB29O14966 203 aa19.01■□□□□ 0.63
LIMD2-207ENST00000579329 TGFBR1P36897 503 aa19.01■□□□□ 0.63
LIMD2-207ENST00000579329 OR3A3P47888 321 aa19.01■□□□□ 0.63
LIMD2-207ENST00000579329 LSM3P62310 102 aaKnown RBP19.01■□□□□ 0.63
LIMD2-207ENST00000579329 OR8H1Q8NGG4 311 aa19.01■□□□□ 0.63
LIMD2-207ENST00000579329 OR5H6Q8NGV6 325 aa19.01■□□□□ 0.63
LIMD2-207ENST00000579329 PHF21AQ96BD5 680 aa19.01■□□□□ 0.63
LIMD2-207ENST00000579329 S1PR3Q99500 378 aa19.01■□□□□ 0.63
LIMD2-207ENST00000579329 NABP2Q9BQ15 211 aa19.01■□□□□ 0.63
LIMD2-207ENST00000579329 CABLES2Q9BTV7 478 aa19.01■□□□□ 0.63
LIMD2-207ENST00000579329 C11orf54Q9H0W9 315 aaPredicted RBP19.01■□□□□ 0.63
LIMD2-207ENST00000579329 NCBP2LA6PVI3 153 aaKnown RBP19■□□□□ 0.63
LIMD2-207ENST00000579329 DIRAS3O95661 229 aa19■□□□□ 0.63
LIMD2-207ENST00000579329 GSTP1P09211 210 aaKnown RBP19■□□□□ 0.63
LIMD2-207ENST00000579329 SMIM18P0DKX4 95 aa19■□□□□ 0.63
LIMD2-207ENST00000579329 DTYMKP23919 212 aa19■□□□□ 0.63
LIMD2-207ENST00000579329 SRSF7Q16629 238 aaKnown RBP eCLIP19■□□□□ 0.63
LIMD2-207ENST00000579329 PDLIM3Q53GG5 364 aaPredicted RBP19■□□□□ 0.63
LIMD2-207ENST00000579329 MAFIPQ8WZ33 124 aa19■□□□□ 0.63
LIMD2-207ENST00000579329 FUNDC2Q9BWH2 189 aa19■□□□□ 0.63
LIMD2-207ENST00000579329 ZNF230Q9UIE0 474 aaPredicted RBP19■□□□□ 0.63
LIMD2-207ENST00000579329 TET2Q6N021 2002 aaPredicted RBP19■□□□□ 0.63
LIMD2-207ENST00000579329 HACD4Q5VWC8 232 aa18.99■□□□□ 0.63
LIMD2-207ENST00000579329 Q6ZS49 121 aa18.99■□□□□ 0.63
LIMD2-207ENST00000579329 OR13F1Q8NGS4 319 aa18.99■□□□□ 0.63
LIMD2-207ENST00000579329 SLC25A38Q96DW6 304 aa18.99■□□□□ 0.63
LIMD2-207ENST00000579329 ABHD14BQ96IU4 210 aa18.99■□□□□ 0.63
LIMD2-207ENST00000579329 AGMATQ9BSE5 352 aa18.99■□□□□ 0.63
LIMD2-207ENST00000579329 RDH8Q9NYR8 311 aa18.99■□□□□ 0.63
LIMD2-207ENST00000579329 ELF5Q9UKW6 265 aaPredicted RBP18.99■□□□□ 0.63
LIMD2-207ENST00000579329 CSF1P09603 554 aa18.98■□□□□ 0.63
LIMD2-207ENST00000579329 GSTT2P0CG29 244 aa18.98■□□□□ 0.63
LIMD2-207ENST00000579329 GSTT2BP0CG30 244 aa18.98■□□□□ 0.63
LIMD2-207ENST00000579329 CD28P10747 220 aa18.98■□□□□ 0.63
LIMD2-207ENST00000579329 RPS19P39019 145 aaKnown RBP18.98■□□□□ 0.63
LIMD2-207ENST00000579329 PITPNAQ00169 270 aa18.98■□□□□ 0.63
LIMD2-207ENST00000579329 PNLIPRP3Q17RR3 467 aa18.98■□□□□ 0.63
LIMD2-207ENST00000579329 ZNF260Q3ZCT1 412 aa18.98■□□□□ 0.63
LIMD2-207ENST00000579329 RPL39P5Q59GN2 51 aa18.98■□□□□ 0.63
LIMD2-207ENST00000579329 IGSF11Q5DX21 431 aa18.98■□□□□ 0.63
LIMD2-207ENST00000579329 CENPVQ7Z7K6 275 aaPredicted RBP18.98■□□□□ 0.63
LIMD2-207ENST00000579329 Q8N9W7 124 aa18.98■□□□□ 0.63
LIMD2-207ENST00000579329 ZNF251Q9BRH9 671 aa18.98■□□□□ 0.63
LIMD2-207ENST00000579329 TOLLIPQ9H0E2 274 aa18.98■□□□□ 0.63
LIMD2-207ENST00000579329 MMP27Q9H306 513 aa18.98■□□□□ 0.63
LIMD2-207ENST00000579329 LIN7CQ9NUP9 197 aaKnown RBP18.98■□□□□ 0.63
LIMD2-207ENST00000579329 SPATA2Q9UM82 520 aa18.98■□□□□ 0.63
LIMD2-207ENST00000579329 A0A0A6YYH2 397 aa18.97■□□□□ 0.63
LIMD2-207ENST00000579329 TMEM235A6NFC5 223 aa18.97■□□□□ 0.63
LIMD2-207ENST00000579329 A6NJ64 397 aa18.97■□□□□ 0.63
LIMD2-207ENST00000579329 BET1O15155 118 aa18.97■□□□□ 0.63
LIMD2-207ENST00000579329 TSPAN15O95858 294 aa18.97■□□□□ 0.63
LIMD2-207ENST00000579329 GNG2P59768 71 aa18.97■□□□□ 0.63
LIMD2-207ENST00000579329 HIST2H2BDQ6DRA6 164 aa18.97■□□□□ 0.63
LIMD2-207ENST00000579329 OR5AU1Q8NGC0 362 aa18.97■□□□□ 0.63
LIMD2-207ENST00000579329 OR10J5Q8NHC4 309 aa18.97■□□□□ 0.63
LIMD2-207ENST00000579329 PLSCR3Q9NRY6 295 aa18.97■□□□□ 0.63
LIMD2-207ENST00000579329 ZNF221Q9UK13 617 aa18.97■□□□□ 0.63
LIMD2-207ENST00000579329 TRBV6-7A0A0A0MS04 114 aa18.96■□□□□ 0.63
LIMD2-207ENST00000579329 DEFA6Q01524 100 aa18.96■□□□□ 0.63
LIMD2-207ENST00000579329 SLC35E3Q7Z769 313 aa18.96■□□□□ 0.63
LIMD2-207ENST00000579329 NUDCD2Q8WVJ2 157 aa18.96■□□□□ 0.63
LIMD2-207ENST00000579329 RASL11BQ9BPW5 248 aa18.96■□□□□ 0.63
LIMD2-207ENST00000579329 MRPS26Q9BYN8 205 aaKnown RBP18.96■□□□□ 0.63
LIMD2-207ENST00000579329 DCSTAMPQ9H295 470 aa18.96■□□□□ 0.63
LIMD2-207ENST00000579329 PRKDCP78527 4128 aaKnown RBP18.96■□□□□ 0.63
LIMD2-207ENST00000579329 IGHG2P01859 326 aa18.95■□□□□ 0.62
LIMD2-207ENST00000579329 GPR12P47775 334 aa18.95■□□□□ 0.62
LIMD2-207ENST00000579329 NDUFA11Q86Y39 141 aa18.95■□□□□ 0.62
LIMD2-207ENST00000579329 ABCG5Q9H222 651 aa18.95■□□□□ 0.62
LIMD2-207ENST00000579329 DIABLOQ9NR28 239 aa18.95■□□□□ 0.62
LIMD2-207ENST00000579329 RNF150Q9ULK6 438 aa18.95■□□□□ 0.62
LIMD2-207ENST00000579329 TRAV18A0A075B6X5 111 aa18.94■□□□□ 0.62
LIMD2-207ENST00000579329 OR5H14A6NHG9 310 aa18.94■□□□□ 0.62
LIMD2-207ENST00000579329 CT45A6P0DMU7 189 aa18.94■□□□□ 0.62
LIMD2-207ENST00000579329 CT45A5P0DMU8 189 aa18.94■□□□□ 0.62
LIMD2-207ENST00000579329 CT45A7P0DMV0 189 aa18.94■□□□□ 0.62
LIMD2-207ENST00000579329 F2RL1P55085 397 aa18.94■□□□□ 0.62
LIMD2-207ENST00000579329 ACTBP60709 375 aa18.94■□□□□ 0.62
LIMD2-207ENST00000579329 NCS1P62166 190 aa18.94■□□□□ 0.62
LIMD2-207ENST00000579329 MMDQ15546 238 aa18.94■□□□□ 0.62
LIMD2-207ENST00000579329 FAM131AQ6UXB0 335 aa18.94■□□□□ 0.62
LIMD2-207ENST00000579329 FOXRED2Q8IWF2 684 aa18.94■□□□□ 0.62
LIMD2-207ENST00000579329 FAM71E2Q8N5Q1 922 aa18.94■□□□□ 0.62
LIMD2-207ENST00000579329 OR4X2Q8NGF9 303 aa18.94■□□□□ 0.62
LIMD2-207ENST00000579329 RBMXL1Q96E39 390 aaKnown RBP18.94■□□□□ 0.62
LIMD2-207ENST00000579329 CITED2Q99967 270 aaPredicted RBP18.94■□□□□ 0.62
LIMD2-207ENST00000579329 GINS4Q9BRT9 223 aa18.94■□□□□ 0.62
LIMD2-207ENST00000579329 ST6GALNAC5Q9BVH7 336 aa18.94■□□□□ 0.62
LIMD2-207ENST00000579329 IGKV1D-8A0A087WSZ0 117 aa18.93■□□□□ 0.62
LIMD2-207ENST00000579329 VBP1P61758 197 aa18.93■□□□□ 0.62
LIMD2-207ENST00000579329 ZNF436-AS1Q8NC38 126 aaPredicted RBP18.93■□□□□ 0.62
LIMD2-207ENST00000579329 CHPT1Q8WUD6 406 aa18.93■□□□□ 0.62
LIMD2-207ENST00000579329 SLC25A46Q96AG3 418 aa18.93■□□□□ 0.62
LIMD2-207ENST00000579329 PSMB11A5LHX3 300 aa18.92■□□□□ 0.62
LIMD2-207ENST00000579329 H0YJW9 148 aa18.92■□□□□ 0.62
LIMD2-207ENST00000579329 SSX5O60225 188 aa18.92■□□□□ 0.62
LIMD2-207ENST00000579329 MC5RP33032 325 aa18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms