RNA–Protein interactions for RNA: ENST00000578501.5

CSNK1D-208, Transcript of casein kinase 1 delta, human

TSL 2

Gene CSNK1D, Length 1,124 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CSNK1D-208	ENST00000578501		Q6ZS49	121 aa		10.81	□□□□□ -0.68
CSNK1D-208	ENST00000578501		Q8N9W7	124 aa		10.81	□□□□□ -0.68
CSNK1D-208	ENST00000578501	S1PR3	Q99500	378 aa		10.81	□□□□□ -0.68
CSNK1D-208	ENST00000578501	NABP2	Q9BQ15	211 aa		10.81	□□□□□ -0.68
CSNK1D-208	ENST00000578501	ZNF251	Q9BRH9	671 aa		10.81	□□□□□ -0.68
CSNK1D-208	ENST00000578501	ABCG5	Q9H222	651 aa		10.81	□□□□□ -0.68
CSNK1D-208	ENST00000578501	RNF167	Q9H6Y7	350 aa		10.81	□□□□□ -0.68
CSNK1D-208	ENST00000578501	LIN7C	Q9NUP9	197 aa	Known RBP	10.81	□□□□□ -0.68
CSNK1D-208	ENST00000578501	ETV7	Q9Y603	341 aa		10.81	□□□□□ -0.68
CSNK1D-208	ENST00000578501	IGKV1-6	A0A0C4DH72	117 aa		10.8	□□□□□ -0.68
CSNK1D-208	ENST00000578501	SH2D7	A6NKC9	451 aa	Predicted RBP	10.8	□□□□□ -0.68
CSNK1D-208	ENST00000578501	NCBP2L	A6PVI3	153 aa	Known RBP	10.8	□□□□□ -0.68
CSNK1D-208	ENST00000578501	ST8SIA5	O15466	376 aa		10.8	□□□□□ -0.68
CSNK1D-208	ENST00000578501	OR3A3	P47888	321 aa		10.8	□□□□□ -0.68
CSNK1D-208	ENST00000578501	MXD1	Q05195	221 aa		10.8	□□□□□ -0.68
CSNK1D-208	ENST00000578501	C9orf152	Q5JTZ5	239 aa		10.8	□□□□□ -0.68
CSNK1D-208	ENST00000578501	FAM71E2	Q8N5Q1	922 aa		10.8	□□□□□ -0.68
CSNK1D-208	ENST00000578501	YIPF6	Q96EC8	236 aa		10.8	□□□□□ -0.68
CSNK1D-208	ENST00000578501	CITED2	Q99967	270 aa	Predicted RBP	10.8	□□□□□ -0.68
CSNK1D-208	ENST00000578501	MRPL20	Q9BYC9	149 aa	Known RBP	10.8	□□□□□ -0.68
CSNK1D-208	ENST00000578501	C11orf54	Q9H0W9	315 aa	Predicted RBP	10.8	□□□□□ -0.68
CSNK1D-208	ENST00000578501	OR1A1	Q9P1Q5	309 aa		10.8	□□□□□ -0.68
CSNK1D-208	ENST00000578501	ADARB2-AS1	A8MUL3	147 aa		10.79	□□□□□ -0.68
CSNK1D-208	ENST00000578501	FABP7	O15540	132 aa		10.79	□□□□□ -0.68
CSNK1D-208	ENST00000578501	OPN1MW	P04001	364 aa		10.79	□□□□□ -0.68
CSNK1D-208	ENST00000578501	GSTP1	P09211	210 aa	Known RBP	10.79	□□□□□ -0.68
CSNK1D-208	ENST00000578501	CLEC2L	P0C7M8	214 aa		10.79	□□□□□ -0.68
CSNK1D-208	ENST00000578501	OPN1MW2	P0DN77	364 aa		10.79	□□□□□ -0.68
CSNK1D-208	ENST00000578501	OPN1MW3	P0DN78	364 aa		10.79	□□□□□ -0.68
CSNK1D-208	ENST00000578501	SNRPB	P14678	240 aa	Known RBP	10.79	□□□□□ -0.68
CSNK1D-208	ENST00000578501	DTYMK	P23919	212 aa		10.79	□□□□□ -0.68
CSNK1D-208	ENST00000578501	F2RL1	P55085	397 aa		10.79	□□□□□ -0.68
CSNK1D-208	ENST00000578501	PITPNA	Q00169	270 aa		10.79	□□□□□ -0.68
CSNK1D-208	ENST00000578501	ARFRP1	Q13795	201 aa		10.79	□□□□□ -0.68
CSNK1D-208	ENST00000578501	CDNF	Q49AH0	187 aa		10.79	□□□□□ -0.68
CSNK1D-208	ENST00000578501	SLC35E3	Q7Z769	313 aa		10.79	□□□□□ -0.68
CSNK1D-208	ENST00000578501	CROCCP3	Q8IVE0	287 aa		10.79	□□□□□ -0.68
CSNK1D-208	ENST00000578501	FOXRED2	Q8IWF2	684 aa		10.79	□□□□□ -0.68
CSNK1D-208	ENST00000578501	OR4X2	Q8NGF9	303 aa		10.79	□□□□□ -0.68
CSNK1D-208	ENST00000578501	LGALS14	Q8TCE9	139 aa		10.79	□□□□□ -0.68
CSNK1D-208	ENST00000578501	CHPT1	Q8WUD6	406 aa		10.79	□□□□□ -0.68
CSNK1D-208	ENST00000578501	PHF21A	Q96BD5	680 aa		10.79	□□□□□ -0.68
CSNK1D-208	ENST00000578501	RASL11B	Q9BPW5	248 aa		10.79	□□□□□ -0.68
CSNK1D-208	ENST00000578501	CABLES2	Q9BTV7	478 aa		10.79	□□□□□ -0.68
CSNK1D-208	ENST00000578501	PARP12	Q9H0J9	701 aa	Known RBP	10.79	□□□□□ -0.68
CSNK1D-208	ENST00000578501		A0A075B6Q4	140 aa		10.78	□□□□□ -0.68
CSNK1D-208	ENST00000578501	TRBV6-7	A0A0A0MS04	114 aa		10.78	□□□□□ -0.68
CSNK1D-208	ENST00000578501		A0A0A6YYH2	397 aa		10.78	□□□□□ -0.68
CSNK1D-208	ENST00000578501	OR5H14	A6NHG9	310 aa		10.78	□□□□□ -0.68
CSNK1D-208	ENST00000578501		A6NJ64	397 aa		10.78	□□□□□ -0.68
CSNK1D-208	ENST00000578501	AIRE	O43918	545 aa		10.78	□□□□□ -0.68
CSNK1D-208	ENST00000578501	MC5R	P33032	325 aa		10.78	□□□□□ -0.68
CSNK1D-208	ENST00000578501	TALDO1	P37837	337 aa		10.78	□□□□□ -0.68
CSNK1D-208	ENST00000578501	NSUN5P1	Q3KNT7	163 aa		10.78	□□□□□ -0.68
CSNK1D-208	ENST00000578501	TCTEX1D4	Q5JR98	221 aa		10.78	□□□□□ -0.68
CSNK1D-208	ENST00000578501	IDNK	Q5T6J7	187 aa		10.78	□□□□□ -0.68
CSNK1D-208	ENST00000578501	HACD4	Q5VWC8	232 aa		10.78	□□□□□ -0.68
CSNK1D-208	ENST00000578501	C1QL4	Q86Z23	238 aa		10.78	□□□□□ -0.68
CSNK1D-208	ENST00000578501	OR4F17	Q8NGA8	305 aa		10.78	□□□□□ -0.68
CSNK1D-208	ENST00000578501	OR10J5	Q8NHC4	309 aa		10.78	□□□□□ -0.68
CSNK1D-208	ENST00000578501	FAM110D	Q8TAY7	271 aa	Predicted RBP	10.78	□□□□□ -0.68
CSNK1D-208	ENST00000578501	ABHD14B	Q96IU4	210 aa		10.78	□□□□□ -0.68
CSNK1D-208	ENST00000578501	OR4F4	Q96R69	305 aa		10.78	□□□□□ -0.68
CSNK1D-208	ENST00000578501	DCSTAMP	Q9H295	470 aa		10.78	□□□□□ -0.68
CSNK1D-208	ENST00000578501	RHBDL2	Q9NX52	303 aa		10.78	□□□□□ -0.68
CSNK1D-208	ENST00000578501	RDH8	Q9NYR8	311 aa		10.78	□□□□□ -0.68
CSNK1D-208	ENST00000578501	GAB2	Q9UQC2	676 aa		10.78	□□□□□ -0.68
CSNK1D-208	ENST00000578501	WNK1	Q9H4A3	2382 aa		10.78	□□□□□ -0.68
CSNK1D-208	ENST00000578501	CMYA5	Q8N3K9	4069 aa		10.78	□□□□□ -0.68
CSNK1D-208	ENST00000578501	PSMB11	A5LHX3	300 aa		10.77	□□□□□ -0.69
CSNK1D-208	ENST00000578501	AP4M1	O00189	453 aa		10.77	□□□□□ -0.69
CSNK1D-208	ENST00000578501	RRP9	O43818	475 aa	Known RBP	10.77	□□□□□ -0.69
CSNK1D-208	ENST00000578501	GSTT2	P0CG29	244 aa		10.77	□□□□□ -0.69
CSNK1D-208	ENST00000578501	GSTT2B	P0CG30	244 aa		10.77	□□□□□ -0.69
CSNK1D-208	ENST00000578501	CT45A6	P0DMU7	189 aa		10.77	□□□□□ -0.69
CSNK1D-208	ENST00000578501	CT45A5	P0DMU8	189 aa		10.77	□□□□□ -0.69
CSNK1D-208	ENST00000578501	CT45A7	P0DMV0	189 aa		10.77	□□□□□ -0.69
CSNK1D-208	ENST00000578501	GPR12	P47775	334 aa		10.77	□□□□□ -0.69
CSNK1D-208	ENST00000578501	ACTB	P60709	375 aa		10.77	□□□□□ -0.69
CSNK1D-208	ENST00000578501	PNLIPRP3	Q17RR3	467 aa		10.77	□□□□□ -0.69
CSNK1D-208	ENST00000578501	ZNF260	Q3ZCT1	412 aa		10.77	□□□□□ -0.69
CSNK1D-208	ENST00000578501	RPL39P5	Q59GN2	51 aa		10.77	□□□□□ -0.69
CSNK1D-208	ENST00000578501	IGSF11	Q5DX21	431 aa		10.77	□□□□□ -0.69
CSNK1D-208	ENST00000578501	COMMD1	Q8N668	190 aa		10.77	□□□□□ -0.69
CSNK1D-208	ENST00000578501	ZNF436-AS1	Q8NC38	126 aa	Predicted RBP	10.77	□□□□□ -0.69
CSNK1D-208	ENST00000578501	NPB	Q8NG41	125 aa		10.77	□□□□□ -0.69
CSNK1D-208	ENST00000578501	OR5AN1	Q8NGI8	311 aa		10.77	□□□□□ -0.69
CSNK1D-208	ENST00000578501	GON7	Q9BXV9	100 aa		10.77	□□□□□ -0.69
CSNK1D-208	ENST00000578501	ZNF230	Q9UIE0	474 aa	Predicted RBP	10.77	□□□□□ -0.69
CSNK1D-208	ENST00000578501	ZNF221	Q9UK13	617 aa		10.77	□□□□□ -0.69
CSNK1D-208	ENST00000578501	ZNF580	Q9UK33	172 aa		10.77	□□□□□ -0.69
CSNK1D-208	ENST00000578501	SPATA2	Q9UM82	520 aa		10.77	□□□□□ -0.69
CSNK1D-208	ENST00000578501	TSSC4	Q9Y5U2	329 aa	Predicted RBP	10.77	□□□□□ -0.69
CSNK1D-208	ENST00000578501	TCRBV4S1A1T	A0A5B7	111 aa		10.76	□□□□□ -0.69
CSNK1D-208	ENST00000578501		H0YJW9	148 aa		10.76	□□□□□ -0.69
CSNK1D-208	ENST00000578501	PROP1	O75360	226 aa		10.76	□□□□□ -0.69
CSNK1D-208	ENST00000578501	SOX6	P35712	828 aa		10.76	□□□□□ -0.69
CSNK1D-208	ENST00000578501	SLC35B1	P78383	322 aa		10.76	□□□□□ -0.69
CSNK1D-208	ENST00000578501	MMD	Q15546	238 aa		10.76	□□□□□ -0.69
CSNK1D-208	ENST00000578501	C10orf99	Q6UWK7	81 aa		10.76	□□□□□ -0.69

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