RNA–Protein interactions for RNA: ENST00000578172.1

NDEL1-204, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

Gene NDEL1, Length 3,927 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-204ENST00000578172 RAMP3O60896 148 aa11.61□□□□□ -0.55
NDEL1-204ENST00000578172 NDUFB7P17568 137 aa11.61□□□□□ -0.55
NDEL1-204ENST00000578172 SSTR5P35346 364 aa11.61□□□□□ -0.55
NDEL1-204ENST00000578172 WNT5AP41221 380 aa11.61□□□□□ -0.55
NDEL1-204ENST00000578172 MRPL49Q13405 166 aaKnown RBP11.61□□□□□ -0.55
NDEL1-204ENST00000578172 FAM201AQ5SY85 155 aa11.61□□□□□ -0.55
NDEL1-204ENST00000578172 HES3Q5TGS1 186 aa11.61□□□□□ -0.55
NDEL1-204ENST00000578172 ETFRF1Q6IPR1 90 aa11.61□□□□□ -0.55
NDEL1-204ENST00000578172 CDPF1Q6NVV7 123 aa11.61□□□□□ -0.55
NDEL1-204ENST00000578172 TRAV24A0A0B4J272 114 aa11.61□□□□□ -0.55
NDEL1-204ENST00000578172 MAP1LC3B2A6NCE7 125 aa11.61□□□□□ -0.55
NDEL1-204ENST00000578172 NKX2-8O15522 239 aa11.61□□□□□ -0.55
NDEL1-204ENST00000578172 SPINK4O60575 86 aa11.61□□□□□ -0.55
NDEL1-204ENST00000578172 PPP1CBP62140 327 aa11.61□□□□□ -0.55
NDEL1-204ENST00000578172 CCDC54Q8NEL0 328 aa11.61□□□□□ -0.55
NDEL1-204ENST00000578172 OR4C12Q96R67 309 aa11.61□□□□□ -0.55
NDEL1-204ENST00000578172 TAAR9Q96RI9 348 aa11.61□□□□□ -0.55
NDEL1-204ENST00000578172 REPIN1Q9BWE0 567 aaKnown RBP11.61□□□□□ -0.55
NDEL1-204ENST00000578172 MAP1LC3BQ9GZQ8 125 aa11.61□□□□□ -0.55
NDEL1-204ENST00000578172 ZNF703Q9H7S9 590 aaPredicted RBP11.61□□□□□ -0.55
NDEL1-204ENST00000578172 ATP23Q9Y6H3 246 aa11.61□□□□□ -0.55
NDEL1-204ENST00000578172 RRP8O43159 456 aaKnown RBP11.6□□□□□ -0.55
NDEL1-204ENST00000578172 HBE1P02100 147 aa11.6□□□□□ -0.55
NDEL1-204ENST00000578172 LYRM2Q9NU23 88 aaPredicted RBP11.6□□□□□ -0.55
NDEL1-204ENST00000578172 ETV2O00321 342 aaPredicted RBP11.6□□□□□ -0.55
NDEL1-204ENST00000578172 CDS2O95674 445 aa11.6□□□□□ -0.55
NDEL1-204ENST00000578172 ZFP36L1Q07352 338 aaKnown RBP11.6□□□□□ -0.55
NDEL1-204ENST00000578172 SLC38A11Q08AI6 406 aa11.6□□□□□ -0.55
NDEL1-204ENST00000578172 SPNS3Q6ZMD2 512 aa11.6□□□□□ -0.55
NDEL1-204ENST00000578172 BAGE3Q86Y29 109 aa11.6□□□□□ -0.55
NDEL1-204ENST00000578172 BAGE2Q86Y30 109 aa11.6□□□□□ -0.55
NDEL1-204ENST00000578172 GINS3Q9BRX5 216 aa11.6□□□□□ -0.55
NDEL1-204ENST00000578172 RTL8AQ9BWD3 113 aa11.6□□□□□ -0.55
NDEL1-204ENST00000578172 GCM1Q9NP62 436 aa11.6□□□□□ -0.55
NDEL1-204ENST00000578172 KLRC4-KLRK1H3BQV0 150 aa11.6□□□□□ -0.55
NDEL1-204ENST00000578172 LHX2P50458 406 aa11.6□□□□□ -0.55
NDEL1-204ENST00000578172 HLA-DRB3P79483 266 aa11.6□□□□□ -0.55
NDEL1-204ENST00000578172 ARL16Q0P5N6 197 aa11.6□□□□□ -0.55
NDEL1-204ENST00000578172 ATMQ13315 3056 aa11.6□□□□□ -0.55
NDEL1-204ENST00000578172 OR8B8Q15620 311 aa11.6□□□□□ -0.55
NDEL1-204ENST00000578172 SCCPDHQ8NBX0 429 aa11.6□□□□□ -0.55
NDEL1-204ENST00000578172 OR4D5Q8NGN0 318 aa11.6□□□□□ -0.55
NDEL1-204ENST00000578172 Q8WTZ3 238 aa11.6□□□□□ -0.55
NDEL1-204ENST00000578172 C10orf35Q96D05 121 aa11.6□□□□□ -0.55
NDEL1-204ENST00000578172 GNPNAT1Q96EK6 184 aaPredicted RBP11.6□□□□□ -0.55
NDEL1-204ENST00000578172 TXN2Q99757 166 aa11.6□□□□□ -0.55
NDEL1-204ENST00000578172 ATP5SQ99766 215 aa11.6□□□□□ -0.55
NDEL1-204ENST00000578172 CUL9Q8IWT3 2517 aa11.6□□□□□ -0.55
NDEL1-204ENST00000578172 CLDN34H7C241 214 aa11.59□□□□□ -0.55
NDEL1-204ENST00000578172 TOMM20LQ6UXN7 152 aa11.59□□□□□ -0.55
NDEL1-204ENST00000578172 ELOVL1Q9BW60 279 aa11.59□□□□□ -0.55
NDEL1-204ENST00000578172 SERTAD4Q9NUC0 356 aa11.59□□□□□ -0.55
NDEL1-204ENST00000578172 METTL1Q9UBP6 276 aaKnown RBP11.59□□□□□ -0.55
NDEL1-204ENST00000578172 PLXNB1O43157 2135 aa11.59□□□□□ -0.55
NDEL1-204ENST00000578172 CEACAM18A8MTB9 384 aa11.59□□□□□ -0.55
NDEL1-204ENST00000578172 PAX6P26367 422 aa11.59□□□□□ -0.55
NDEL1-204ENST00000578172 ARR3P36575 388 aa11.59□□□□□ -0.55
NDEL1-204ENST00000578172 FOXO1Q12778 655 aa11.59□□□□□ -0.55
NDEL1-204ENST00000578172 NANOS1Q8WY41 292 aaKnown RBP11.59□□□□□ -0.55
NDEL1-204ENST00000578172 ATRXP46100 2492 aa11.59□□□□□ -0.55
NDEL1-204ENST00000578172 C10orf142B7Z368 130 aa11.59□□□□□ -0.55
NDEL1-204ENST00000578172 K7N7A8 449 aa11.59□□□□□ -0.55
NDEL1-204ENST00000578172 FCGR3BO75015 233 aa11.59□□□□□ -0.55
NDEL1-204ENST00000578172 HBG1P69891 147 aa11.59□□□□□ -0.55
NDEL1-204ENST00000578172 HBG2P69892 147 aa11.59□□□□□ -0.55
NDEL1-204ENST00000578172 NCR3LG1Q68D85 454 aa11.59□□□□□ -0.55
NDEL1-204ENST00000578172 OR2Z1Q8NG97 314 aa11.59□□□□□ -0.55
NDEL1-204ENST00000578172 MRPL30Q8TCC3 161 aaKnown RBP11.59□□□□□ -0.55
NDEL1-204ENST00000578172 GPR87Q9BY21 358 aa11.59□□□□□ -0.55
NDEL1-204ENST00000578172 HEYLQ9NQ87 328 aaPredicted RBP11.59□□□□□ -0.55
NDEL1-204ENST00000578172 DMRT1Q9Y5R6 373 aa11.59□□□□□ -0.55
NDEL1-204ENST00000578172 ZNF729A6NN14 1252 aaPredicted RBP11.58□□□□□ -0.56
NDEL1-204ENST00000578172 CLDN18P56856 261 aa11.58□□□□□ -0.56
NDEL1-204ENST00000578172 ERVFRD-1P60508 538 aa11.58□□□□□ -0.56
NDEL1-204ENST00000578172 ZNF766Q5HY98 468 aa11.58□□□□□ -0.56
NDEL1-204ENST00000578172 H2BFWTQ7Z2G1 175 aa11.58□□□□□ -0.56
NDEL1-204ENST00000578172 OR13D1Q8NGV5 346 aa11.58□□□□□ -0.56
NDEL1-204ENST00000578172 WDYHV1Q96HA8 205 aa11.58□□□□□ -0.56
NDEL1-204ENST00000578172 C1QTNF5Q9BXJ0 243 aa11.58□□□□□ -0.56
NDEL1-204ENST00000578172 RBKSQ9H477 322 aa11.58□□□□□ -0.56
NDEL1-204ENST00000578172 ANAPC10Q9UM13 185 aa11.58□□□□□ -0.56
NDEL1-204ENST00000578172 ZNF320A2RRD8 509 aa11.58□□□□□ -0.56
NDEL1-204ENST00000578172 SH2D1BO14796 132 aa11.58□□□□□ -0.56
NDEL1-204ENST00000578172 SPRY3O43610 288 aa11.58□□□□□ -0.56
NDEL1-204ENST00000578172 ZG16O60844 167 aa11.58□□□□□ -0.56
NDEL1-204ENST00000578172 COL8A2P25067 703 aa11.58□□□□□ -0.56
NDEL1-204ENST00000578172 GCH1P30793 250 aa11.58□□□□□ -0.56
NDEL1-204ENST00000578172 GLIPR1P48060 266 aa11.58□□□□□ -0.56
NDEL1-204ENST00000578172 FGFRL1Q8N441 504 aa11.58□□□□□ -0.56
NDEL1-204ENST00000578172 CBLN4Q9NTU7 201 aa11.58□□□□□ -0.56
NDEL1-204ENST00000578172 ACTL6BO94805 426 aa11.58□□□□□ -0.56
NDEL1-204ENST00000578172 IGHEP01854 428 aa11.58□□□□□ -0.56
NDEL1-204ENST00000578172 HIST1H3AP68431 136 aa11.58□□□□□ -0.56
NDEL1-204ENST00000578172 TMEM18Q96B42 140 aa11.58□□□□□ -0.56
NDEL1-204ENST00000578172 TAAR3PQ9P1P4 343 aa11.58□□□□□ -0.56
NDEL1-204ENST00000578172 C5orf52A6NGY3 159 aa11.57□□□□□ -0.56
NDEL1-204ENST00000578172 PITX3O75364 302 aa11.57□□□□□ -0.56
NDEL1-204ENST00000578172 ZNF737O75373 536 aa11.57□□□□□ -0.56
NDEL1-204ENST00000578172 IGLV3-1P01715 115 aa11.57□□□□□ -0.56
NDEL1-204ENST00000578172 TRGC1P0CF51 173 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms