RNA–Protein interactions for RNA: ENST00000577539.1

VAPA-203, Transcript of VAMP associated protein A, humanhuman

Gene VAPA, Length 3,760 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-203ENST00000577539 CDKN1AP38936 164 aa4.53□□□□□ -1.68
VAPA-203ENST00000577539 LCN15Q6UWW0 184 aa4.53□□□□□ -1.68
VAPA-203ENST00000577539 SEM1Q6ZVN7 128 aa4.53□□□□□ -1.68
VAPA-203ENST00000577539 COMMD1Q8N668 190 aa4.53□□□□□ -1.68
VAPA-203ENST00000577539 TMEM171Q8WVE6 324 aa4.53□□□□□ -1.68
VAPA-203ENST00000577539 HIST1H2BAQ96A08 127 aa4.53□□□□□ -1.68
VAPA-203ENST00000577539 LINC00470Q9BZP3 86 aa4.53□□□□□ -1.68
VAPA-203ENST00000577539 DLL3Q9NYJ7 618 aa4.53□□□□□ -1.68
VAPA-203ENST00000577539 OR2W1Q9Y3N9 320 aa4.53□□□□□ -1.68
VAPA-203ENST00000577539 MMP24Q9Y5R2 645 aa4.53□□□□□ -1.68
VAPA-203ENST00000577539 PTPRZ1P23471 2315 aaPredicted RBP4.53□□□□□ -1.68
VAPA-203ENST00000577539 CADP27708 2225 aa4.53□□□□□ -1.68
VAPA-203ENST00000577539 RIF1Q5UIP0 2472 aaKnown RBP4.53□□□□□ -1.68
VAPA-203ENST00000577539 ROS1P08922 2347 aa4.53□□□□□ -1.68
VAPA-203ENST00000577539 CELSR3Q9NYQ7 3312 aa4.53□□□□□ -1.68
VAPA-203ENST00000577539 ZFP92A6NM28 416 aa4.53□□□□□ -1.68
VAPA-203ENST00000577539 PROB1E7EW31 1015 aa4.53□□□□□ -1.68
VAPA-203ENST00000577539 TMEM50AO95807 157 aa4.53□□□□□ -1.68
VAPA-203ENST00000577539 METTL15P1P0C7V9 234 aa4.53□□□□□ -1.68
VAPA-203ENST00000577539 WNT5AP41221 380 aa4.53□□□□□ -1.68
VAPA-203ENST00000577539 RPS10P46783 165 aaKnown RBP4.53□□□□□ -1.68
VAPA-203ENST00000577539 HOXA1P49639 335 aaPredicted RBP4.53□□□□□ -1.68
VAPA-203ENST00000577539 SULT1A1P50225 295 aa4.53□□□□□ -1.68
VAPA-203ENST00000577539 UBE2KP61086 200 aa4.53□□□□□ -1.68
VAPA-203ENST00000577539 ERVS71-1P61550 626 aa4.53□□□□□ -1.68
VAPA-203ENST00000577539 HLA-DRB3P79483 266 aa4.53□□□□□ -1.68
VAPA-203ENST00000577539 MRPL49Q13405 166 aaKnown RBP4.53□□□□□ -1.68
VAPA-203ENST00000577539 RNPS1Q15287 305 aaKnown RBP4.53□□□□□ -1.68
VAPA-203ENST00000577539 TBC1D28Q2M2D7 210 aa4.53□□□□□ -1.68
VAPA-203ENST00000577539 EIF2S3LQ2VIR3 472 aaKnown RBP4.53□□□□□ -1.68
VAPA-203ENST00000577539 KRTAP27-1Q3LI81 207 aa4.53□□□□□ -1.68
VAPA-203ENST00000577539 ZNF528Q3MIS6 628 aa4.53□□□□□ -1.68
VAPA-203ENST00000577539 LFNGQ8NES3 379 aa4.53□□□□□ -1.68
VAPA-203ENST00000577539 NUDT10Q8NFP7 164 aa4.53□□□□□ -1.68
VAPA-203ENST00000577539 OR1J1Q8NGS3 322 aa4.53□□□□□ -1.68
VAPA-203ENST00000577539 OR5P3Q8WZ94 311 aa4.53□□□□□ -1.68
VAPA-203ENST00000577539 GPR146Q96CH1 333 aa4.53□□□□□ -1.68
VAPA-203ENST00000577539 NUDT11Q96G61 164 aa4.53□□□□□ -1.68
VAPA-203ENST00000577539 OR2J1Q9GZK6 312 aa4.53□□□□□ -1.68
VAPA-203ENST00000577539 PRO3102Q9H379 93 aa4.53□□□□□ -1.68
VAPA-203ENST00000577539 RIMS4Q9H426 269 aaPredicted RBP4.53□□□□□ -1.68
VAPA-203ENST00000577539 PLK3Q9H4B4 646 aa4.53□□□□□ -1.68
VAPA-203ENST00000577539 UFSP2Q9NUQ7 469 aa4.53□□□□□ -1.68
VAPA-203ENST00000577539 MRPS18CQ9Y3D5 142 aaKnown RBP4.53□□□□□ -1.68
VAPA-203ENST00000577539 MPC1Q9Y5U8 109 aa4.53□□□□□ -1.68
VAPA-203ENST00000577539 NCKAP5O14513 1909 aa4.53□□□□□ -1.68
VAPA-203ENST00000577539 TRGV5A0A0B4J1U4 118 aa4.53□□□□□ -1.68
VAPA-203ENST00000577539 TRAV24A0A0B4J272 114 aa4.53□□□□□ -1.68
VAPA-203ENST00000577539 FAM90A10PA6NDY2 464 aa4.53□□□□□ -1.68
VAPA-203ENST00000577539 RBFOX3A6NFN3 312 aa4.53□□□□□ -1.68
VAPA-203ENST00000577539 FAM90A8PA6NJQ4 464 aa4.53□□□□□ -1.68
VAPA-203ENST00000577539 OR5B21A6NL26 309 aa4.53□□□□□ -1.68
VAPA-203ENST00000577539 K7N7A8 449 aa4.53□□□□□ -1.68
VAPA-203ENST00000577539 PITX3O75364 302 aa4.53□□□□□ -1.68
VAPA-203ENST00000577539 FAM90A13PP0C7W8 464 aa4.53□□□□□ -1.68
VAPA-203ENST00000577539 FAM90A24PP0C7X0 464 aa4.53□□□□□ -1.68
VAPA-203ENST00000577539 UCP1P25874 307 aa4.53□□□□□ -1.68
VAPA-203ENST00000577539 CEBPDP49716 269 aaPredicted RBP4.53□□□□□ -1.68
VAPA-203ENST00000577539 DAZAP2Q15038 168 aaPredicted RBP4.53□□□□□ -1.68
VAPA-203ENST00000577539 SPANXN5Q5MJ07 72 aa4.53□□□□□ -1.68
VAPA-203ENST00000577539 ZNF808Q8N4W9 903 aaPredicted RBP4.53□□□□□ -1.68
VAPA-203ENST00000577539 C15orf54Q8N8G6 183 aa4.53□□□□□ -1.68
VAPA-203ENST00000577539 OR10V1Q8NGI7 309 aa4.53□□□□□ -1.68
VAPA-203ENST00000577539 OR1K1Q8NGR3 316 aa4.53□□□□□ -1.68
VAPA-203ENST00000577539 MRPL30Q8TCC3 161 aaKnown RBP4.53□□□□□ -1.68
VAPA-203ENST00000577539 MBD6Q96DN6 1003 aa4.53□□□□□ -1.68
VAPA-203ENST00000577539 TMEM56Q96MV1 263 aa4.53□□□□□ -1.68
VAPA-203ENST00000577539 DDA1Q9BW61 102 aa4.53□□□□□ -1.68
VAPA-203ENST00000577539 RTL8AQ9BWD3 113 aa4.53□□□□□ -1.68
VAPA-203ENST00000577539 GPR87Q9BY21 358 aa4.53□□□□□ -1.68
VAPA-203ENST00000577539 LYRM2Q9NU23 88 aaPredicted RBP4.53□□□□□ -1.68
VAPA-203ENST00000577539 GNG13Q9P2W3 67 aa4.53□□□□□ -1.68
VAPA-203ENST00000577539 TMEM56-RWDD3S4R434 201 aa4.53□□□□□ -1.68
VAPA-203ENST00000577539 A0A0G2JRQ6 117 aa4.52□□□□□ -1.69
VAPA-203ENST00000577539 A0A1W2PNU3 283 aaPredicted RBP4.52□□□□□ -1.69
VAPA-203ENST00000577539 ZNF727A8MUV8 499 aa4.52□□□□□ -1.69
VAPA-203ENST00000577539 A8MZ25 164 aa4.52□□□□□ -1.69
VAPA-203ENST00000577539 NDUFA2O43678 99 aa4.52□□□□□ -1.69
VAPA-203ENST00000577539 MT-ND4LP03901 98 aa4.52□□□□□ -1.69
VAPA-203ENST00000577539 NQO2P16083 231 aa4.52□□□□□ -1.69
VAPA-203ENST00000577539 ELLP55199 621 aaPredicted RBP4.52□□□□□ -1.69
VAPA-203ENST00000577539 LTC4SQ16873 150 aa4.52□□□□□ -1.69
VAPA-203ENST00000577539 ALKBH6Q3KRA9 238 aa4.52□□□□□ -1.69
VAPA-203ENST00000577539 HES3Q5TGS1 186 aa4.52□□□□□ -1.69
VAPA-203ENST00000577539 FBXW9Q5XUX1 488 aa4.52□□□□□ -1.69
VAPA-203ENST00000577539 OR8G2PQ6IF36 304 aa4.52□□□□□ -1.69
VAPA-203ENST00000577539 SLC16A13Q7RTY0 426 aa4.52□□□□□ -1.69
VAPA-203ENST00000577539 NANPQ8TBE9 248 aa4.52□□□□□ -1.69
VAPA-203ENST00000577539 GNPNAT1Q96EK6 184 aaPredicted RBP4.52□□□□□ -1.69
VAPA-203ENST00000577539 NEU1Q99519 415 aa4.52□□□□□ -1.69
VAPA-203ENST00000577539 RSG1Q9BU20 258 aa4.52□□□□□ -1.69
VAPA-203ENST00000577539 ARV1Q9H2C2 271 aa4.52□□□□□ -1.69
VAPA-203ENST00000577539 ATPIF1Q9UII2 106 aa4.52□□□□□ -1.69
VAPA-203ENST00000577539 CDC42EP3Q9UKI2 254 aa4.52□□□□□ -1.69
VAPA-203ENST00000577539 FZR1Q9UM11 496 aa4.52□□□□□ -1.69
VAPA-203ENST00000577539 MBD3L4A6NDZ8 208 aaPredicted RBP4.52□□□□□ -1.69
VAPA-203ENST00000577539 MBD3L3A6NE82 208 aaPredicted RBP4.52□□□□□ -1.69
VAPA-203ENST00000577539 C21orf140B9A014 251 aa4.52□□□□□ -1.69
VAPA-203ENST00000577539 H0Y980 276 aa4.52□□□□□ -1.69
VAPA-203ENST00000577539 H0YL77 283 aa4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 90.9 ms