RNA–Protein interactions for RNA: ENST00000573126.1

RPAIN-212, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 2,728 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-212ENST00000573126 PIGBOS1A0A0B4J2F0 54 aa9.44□□□□□ -0.9
RPAIN-212ENST00000573126 LOC102723971A0A1B0GUV8 181 aa9.44□□□□□ -0.9
RPAIN-212ENST00000573126 IQCF6A8MYZ5 107 aa9.44□□□□□ -0.9
RPAIN-212ENST00000573126 J3QW42 95 aa9.44□□□□□ -0.9
RPAIN-212ENST00000573126 CLDN1O95832 211 aa9.44□□□□□ -0.9
RPAIN-212ENST00000573126 ERVFRD-1P60508 538 aa9.44□□□□□ -0.9
RPAIN-212ENST00000573126 RPL30P62888 115 aaKnown RBP9.44□□□□□ -0.9
RPAIN-212ENST00000573126 KHDC3LQ587J8 217 aa9.44□□□□□ -0.9
RPAIN-212ENST00000573126 NCMAPQ5T1S8 102 aa9.44□□□□□ -0.9
RPAIN-212ENST00000573126 DPPA3Q6W0C5 159 aa9.44□□□□□ -0.9
RPAIN-212ENST00000573126 Q6ZR03 302 aa9.44□□□□□ -0.9
RPAIN-212ENST00000573126 FAM214BQ7L5A3 538 aa9.44□□□□□ -0.9
RPAIN-212ENST00000573126 Q8WTZ3 238 aa9.44□□□□□ -0.9
RPAIN-212ENST00000573126 GALMQ96C23 342 aa9.44□□□□□ -0.9
RPAIN-212ENST00000573126 C5orf30Q96GV9 206 aa9.44□□□□□ -0.9
RPAIN-212ENST00000573126 OR4C12Q96R67 309 aa9.44□□□□□ -0.9
RPAIN-212ENST00000573126 KCNIP1Q9NZI2 227 aa9.44□□□□□ -0.9
RPAIN-212ENST00000573126 METTL1Q9UBP6 276 aaKnown RBP9.44□□□□□ -0.9
RPAIN-212ENST00000573126 CNOT1A5YKK6 2376 aaKnown RBP9.44□□□□□ -0.9
RPAIN-212ENST00000573126 NKX2-8O15522 239 aa9.43□□□□□ -0.9
RPAIN-212ENST00000573126 WNT2P09544 360 aa9.43□□□□□ -0.9
RPAIN-212ENST00000573126 IL2RGP31785 369 aa9.43□□□□□ -0.9
RPAIN-212ENST00000573126 GABRA2P47869 451 aa9.43□□□□□ -0.9
RPAIN-212ENST00000573126 CCL11P51671 97 aa9.43□□□□□ -0.9
RPAIN-212ENST00000573126 LINC00205P59089 165 aa9.43□□□□□ -0.9
RPAIN-212ENST00000573126 GABRA6Q16445 453 aa9.43□□□□□ -0.9
RPAIN-212ENST00000573126 PRAMEF6Q5VXH4 476 aa9.43□□□□□ -0.9
RPAIN-212ENST00000573126 VWA1Q6PCB0 445 aa9.43□□□□□ -0.9
RPAIN-212ENST00000573126 BTNL3Q6UXE8 466 aa9.43□□□□□ -0.9
RPAIN-212ENST00000573126 MRGPRDQ8TDS7 321 aa9.43□□□□□ -0.9
RPAIN-212ENST00000573126 MALSU1Q96EH3 234 aa9.43□□□□□ -0.9
RPAIN-212ENST00000573126 TVP23CQ96ET8 276 aa9.43□□□□□ -0.9
RPAIN-212ENST00000573126 MSL2Q9HCI7 577 aa9.43□□□□□ -0.9
RPAIN-212ENST00000573126 TMEM30CPA0ZSE6 113 aa9.43□□□□□ -0.9
RPAIN-212ENST00000573126 S100A9P06702 114 aaKnown RBP9.43□□□□□ -0.9
RPAIN-212ENST00000573126 CXCL1P09341 107 aa9.43□□□□□ -0.9
RPAIN-212ENST00000573126 BCL2P10415 239 aa9.43□□□□□ -0.9
RPAIN-212ENST00000573126 RPS16P62249 146 aaKnown RBP9.43□□□□□ -0.9
RPAIN-212ENST00000573126 ELOBQ15370 118 aa9.43□□□□□ -0.9
RPAIN-212ENST00000573126 LRRC75BQ2VPJ9 315 aa9.43□□□□□ -0.9
RPAIN-212ENST00000573126 CLCF1Q9UBD9 225 aa9.43□□□□□ -0.9
RPAIN-212ENST00000573126 DOCK11Q5JSL3 2073 aa9.43□□□□□ -0.9
RPAIN-212ENST00000573126 MAP1BP46821 2468 aaKnown RBP9.43□□□□□ -0.9
RPAIN-212ENST00000573126 TRAV1-1A0A0B4J248 108 aa9.42□□□□□ -0.9
RPAIN-212ENST00000573126 IFNA17P01571 189 aa9.42□□□□□ -0.9
RPAIN-212ENST00000573126 HBZP02008 142 aa9.42□□□□□ -0.9
RPAIN-212ENST00000573126 S100A8P05109 93 aa9.42□□□□□ -0.9
RPAIN-212ENST00000573126 CD55P08174 381 aa9.42□□□□□ -0.9
RPAIN-212ENST00000573126 SSTR5P35346 364 aa9.42□□□□□ -0.9
RPAIN-212ENST00000573126 CD200P41217 278 aa9.42□□□□□ -0.9
RPAIN-212ENST00000573126 FABP6P51161 128 aa9.42□□□□□ -0.9
RPAIN-212ENST00000573126 Q6ZT83 130 aa9.42□□□□□ -0.9
RPAIN-212ENST00000573126 ZNF645Q8N7E2 425 aa9.42□□□□□ -0.9
RPAIN-212ENST00000573126 RFESDQ8TAC1 157 aa9.42□□□□□ -0.9
RPAIN-212ENST00000573126 WDR61Q9GZS3 305 aaKnown RBP9.42□□□□□ -0.9
RPAIN-212ENST00000573126 HIPK2Q9H2X6 1198 aa9.42□□□□□ -0.9
RPAIN-212ENST00000573126 TGIF2-C20orf24A0A0A6YYL0 155 aa9.42□□□□□ -0.9
RPAIN-212ENST00000573126 IGHV3-43A0A0B4J1X8 118 aa9.42□□□□□ -0.9
RPAIN-212ENST00000573126 DEFB108AA8MXU0 73 aa9.42□□□□□ -0.9
RPAIN-212ENST00000573126 AP4M1O00189 453 aa9.42□□□□□ -0.9
RPAIN-212ENST00000573126 HMGB3O15347 200 aaKnown RBP9.42□□□□□ -0.9
RPAIN-212ENST00000573126 S1PR2O95136 353 aa9.42□□□□□ -0.9
RPAIN-212ENST00000573126 SMIM6P0DI80 62 aa9.42□□□□□ -0.9
RPAIN-212ENST00000573126 IGHV3-43DP0DP04 118 aa9.42□□□□□ -0.9
RPAIN-212ENST00000573126 HOXC12P31275 282 aa9.42□□□□□ -0.9
RPAIN-212ENST00000573126 TNFRSF9Q07011 255 aa9.42□□□□□ -0.9
RPAIN-212ENST00000573126 SLC38A11Q08AI6 406 aa9.42□□□□□ -0.9
RPAIN-212ENST00000573126 KIAA0141Q14154 515 aaPredicted RBP9.42□□□□□ -0.9
RPAIN-212ENST00000573126 FAM90A2PQ658T7 463 aa9.42□□□□□ -0.9
RPAIN-212ENST00000573126 FIP1L1Q6UN15 594 aaKnown RBP9.42□□□□□ -0.9
RPAIN-212ENST00000573126 BEND4Q6ZU67 534 aa9.42□□□□□ -0.9
RPAIN-212ENST00000573126 C11orf53Q8IXP5 236 aa9.42□□□□□ -0.9
RPAIN-212ENST00000573126 FDCSPQ8NFU4 85 aa9.42□□□□□ -0.9
RPAIN-212ENST00000573126 RBKSQ9H477 322 aa9.42□□□□□ -0.9
RPAIN-212ENST00000573126 CLN8Q9UBY8 286 aa9.42□□□□□ -0.9
RPAIN-212ENST00000573126 METRNQ9UJH8 293 aa9.42□□□□□ -0.9
RPAIN-212ENST00000573126 CLN5O75503 358 aa9.41□□□□□ -0.9
RPAIN-212ENST00000573126 PTBP3O95758 552 aaKnown RBP9.41□□□□□ -0.9
RPAIN-212ENST00000573126 MAS1LP35410 378 aa9.41□□□□□ -0.9
RPAIN-212ENST00000573126 ZNF674Q2M3X9 581 aa9.41□□□□□ -0.9
RPAIN-212ENST00000573126 SPINK9Q5DT21 86 aa9.41□□□□□ -0.9
RPAIN-212ENST00000573126 SLC35E3Q7Z769 313 aa9.41□□□□□ -0.9
RPAIN-212ENST00000573126 TCTEX1D2Q8WW35 142 aa9.41□□□□□ -0.9
RPAIN-212ENST00000573126 NINJ1Q92982 152 aa9.41□□□□□ -0.9
RPAIN-212ENST00000573126 COQ2Q96H96 371 aa9.41□□□□□ -0.9
RPAIN-212ENST00000573126 LOXL4Q96JB6 756 aa9.41□□□□□ -0.9
RPAIN-212ENST00000573126 PSMG3Q9BT73 122 aaPredicted RBP9.41□□□□□ -0.9
RPAIN-212ENST00000573126 HES4Q9HCC6 221 aa9.41□□□□□ -0.9
RPAIN-212ENST00000573126 NIT2Q9NQR4 276 aa9.41□□□□□ -0.9
RPAIN-212ENST00000573126 CHD3Q12873 2000 aaKnown RBP9.41□□□□□ -0.9
RPAIN-212ENST00000573126 RP1L1Q8IWN7 2480 aaPredicted RBP9.41□□□□□ -0.9
RPAIN-212ENST00000573126 A0A087WWC5 75 aa9.41□□□□□ -0.9
RPAIN-212ENST00000573126 TMEM210A6NLX4 147 aa9.41□□□□□ -0.9
RPAIN-212ENST00000573126 RNF212BA8MTL3 300 aa9.41□□□□□ -0.9
RPAIN-212ENST00000573126 C17orf98A8MV24 154 aa9.41□□□□□ -0.9
RPAIN-212ENST00000573126 TIMM8AO60220 97 aaPredicted RBP9.41□□□□□ -0.9
RPAIN-212ENST00000573126 YIF1AO95070 293 aa9.41□□□□□ -0.9
RPAIN-212ENST00000573126 IGKV1D-33P01593 117 aa9.41□□□□□ -0.9
RPAIN-212ENST00000573126 IGKV1-33P01594 117 aa9.41□□□□□ -0.9
RPAIN-212ENST00000573126 GLIPR1P48060 266 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms