RNA–Protein interactions for RNA: ENST00000572290.1

NUP88-204, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 615 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-204ENST00000572290 CHPT1Q8WUD6 406 aa15.93■□□□□ 0.14
NUP88-204ENST00000572290 EDARADDQ8WWZ3 215 aa15.93■□□□□ 0.14
NUP88-204ENST00000572290 NOL4LQ96MY1 436 aaPredicted RBP15.93■□□□□ 0.14
NUP88-204ENST00000572290 ATG5Q9H1Y0 275 aa15.93■□□□□ 0.14
NUP88-204ENST00000572290 GHITMQ9H3K2 345 aa15.93■□□□□ 0.14
NUP88-204ENST00000572290 DAPK2Q9UIK4 370 aa15.93■□□□□ 0.14
NUP88-204ENST00000572290 TSSC4Q9Y5U2 329 aaPredicted RBP15.93■□□□□ 0.14
NUP88-204ENST00000572290 LOC100506127A0A0U1RQW1 187 aa15.92■□□□□ 0.14
NUP88-204ENST00000572290 SDC2P34741 201 aa15.92■□□□□ 0.14
NUP88-204ENST00000572290 GPR12P47775 334 aa15.92■□□□□ 0.14
NUP88-204ENST00000572290 SFXN4Q6P4A7 337 aa15.92■□□□□ 0.14
NUP88-204ENST00000572290 ZNF329Q86UD4 541 aa15.92■□□□□ 0.14
NUP88-204ENST00000572290 ZNF251Q9BRH9 671 aa15.92■□□□□ 0.14
NUP88-204ENST00000572290 C11orf54Q9H0W9 315 aaPredicted RBP15.92■□□□□ 0.14
NUP88-204ENST00000572290 LINC00527Q9UJ94 153 aa15.92■□□□□ 0.14
NUP88-204ENST00000572290 TET2Q6N021 2002 aaPredicted RBP15.92■□□□□ 0.14
NUP88-204ENST00000572290 MEGF8Q7Z7M0 2845 aa15.91■□□□□ 0.14
NUP88-204ENST00000572290 IGKV1-6A0A0C4DH72 117 aa15.91■□□□□ 0.14
NUP88-204ENST00000572290 FABP7O15540 132 aa15.91■□□□□ 0.14
NUP88-204ENST00000572290 FCGR3AP08637 254 aa15.91■□□□□ 0.14
NUP88-204ENST00000572290 MXD1Q05195 221 aa15.91■□□□□ 0.14
NUP88-204ENST00000572290 KIR2DS1Q14954 304 aa15.91■□□□□ 0.14
NUP88-204ENST00000572290 ARL6IP1Q15041 203 aa15.91■□□□□ 0.14
NUP88-204ENST00000572290 MMDQ15546 238 aa15.91■□□□□ 0.14
NUP88-204ENST00000572290 RPL39P5Q59GN2 51 aa15.91■□□□□ 0.14
NUP88-204ENST00000572290 KHDC1LQ5JSQ8 128 aa15.91■□□□□ 0.14
NUP88-204ENST00000572290 STPG2Q8N412 459 aa15.91■□□□□ 0.14
NUP88-204ENST00000572290 FAM71E2Q8N5Q1 922 aa15.91■□□□□ 0.14
NUP88-204ENST00000572290 OR4A4PQ8NGN8 299 aa15.91■□□□□ 0.14
NUP88-204ENST00000572290 ABHD14BQ96IU4 210 aa15.91■□□□□ 0.14
NUP88-204ENST00000572290 AGMATQ9BSE5 352 aa15.91■□□□□ 0.14
NUP88-204ENST00000572290 RNF167Q9H6Y7 350 aa15.91■□□□□ 0.14
NUP88-204ENST00000572290 LINC01548A6NM66 108 aa15.9■□□□□ 0.14
NUP88-204ENST00000572290 AP4M1O00189 453 aa15.9■□□□□ 0.14
NUP88-204ENST00000572290 KCNAB3O43448 404 aa15.9■□□□□ 0.14
NUP88-204ENST00000572290 TNFAIP8O95379 198 aa15.9■□□□□ 0.14
NUP88-204ENST00000572290 CLEC2LP0C7M8 214 aa15.9■□□□□ 0.14
NUP88-204ENST00000572290 SNRPBP14678 240 aaKnown RBP15.9■□□□□ 0.14
NUP88-204ENST00000572290 SERPINB10P48595 397 aa15.9■□□□□ 0.14
NUP88-204ENST00000572290 ACTBP60709 375 aa15.9■□□□□ 0.14
NUP88-204ENST00000572290 SLC35B1P78383 322 aa15.9■□□□□ 0.14
NUP88-204ENST00000572290 ARFRP1Q13795 201 aa15.9■□□□□ 0.14
NUP88-204ENST00000572290 VWFP04275 2813 aa15.9■□□□□ 0.14
NUP88-204ENST00000572290 A0A087WXM4 84 aa15.89■□□□□ 0.13
NUP88-204ENST00000572290 WIPF1O43516 503 aa15.89■□□□□ 0.13
NUP88-204ENST00000572290 CT45A6P0DMU7 189 aa15.89■□□□□ 0.13
NUP88-204ENST00000572290 CT45A5P0DMU8 189 aa15.89■□□□□ 0.13
NUP88-204ENST00000572290 CT45A7P0DMV0 189 aa15.89■□□□□ 0.13
NUP88-204ENST00000572290 PF4V1P10720 104 aa15.89■□□□□ 0.13
NUP88-204ENST00000572290 SOX6P35712 828 aa15.89■□□□□ 0.13
NUP88-204ENST00000572290 TALDO1P37837 337 aa15.89■□□□□ 0.13
NUP88-204ENST00000572290 TSPAN14Q8NG11 270 aa15.89■□□□□ 0.13
NUP88-204ENST00000572290 PHF21AQ96BD5 680 aa15.89■□□□□ 0.13
NUP88-204ENST00000572290 CENPOQ9BU64 300 aa15.89■□□□□ 0.13
NUP88-204ENST00000572290 VCX3AQ9NNX9 186 aa15.89■□□□□ 0.13
NUP88-204ENST00000572290 RDH8Q9NYR8 311 aa15.89■□□□□ 0.13
NUP88-204ENST00000572290 RNF150Q9ULK6 438 aa15.89■□□□□ 0.13
NUP88-204ENST00000572290 BET1O15155 118 aa15.88■□□□□ 0.13
NUP88-204ENST00000572290 GSTT2P0CG29 244 aa15.88■□□□□ 0.13
NUP88-204ENST00000572290 GSTT2BP0CG30 244 aa15.88■□□□□ 0.13
NUP88-204ENST00000572290 CDNFQ49AH0 187 aa15.88■□□□□ 0.13
NUP88-204ENST00000572290 FAM131AQ6UXB0 335 aa15.88■□□□□ 0.13
NUP88-204ENST00000572290 C1QL4Q86Z23 238 aa15.88■□□□□ 0.13
NUP88-204ENST00000572290 COMMD1Q8N668 190 aa15.88■□□□□ 0.13
NUP88-204ENST00000572290 LGALS14Q8TCE9 139 aa15.88■□□□□ 0.13
NUP88-204ENST00000572290 MAFIPQ8WZ33 124 aa15.88■□□□□ 0.13
NUP88-204ENST00000572290 RITA1Q96K30 269 aa15.88■□□□□ 0.13
NUP88-204ENST00000572290 HSPB9Q9BQS6 159 aa15.88■□□□□ 0.13
NUP88-204ENST00000572290 CABLES2Q9BTV7 478 aa15.88■□□□□ 0.13
NUP88-204ENST00000572290 TOLLIPQ9H0E2 274 aa15.88■□□□□ 0.13
NUP88-204ENST00000572290 ZNF230Q9UIE0 474 aaPredicted RBP15.88■□□□□ 0.13
NUP88-204ENST00000572290 ZNF221Q9UK13 617 aa15.88■□□□□ 0.13
NUP88-204ENST00000572290 NBR2O15453 112 aa15.87■□□□□ 0.13
NUP88-204ENST00000572290 RRP9O43818 475 aaKnown RBP15.87■□□□□ 0.13
NUP88-204ENST00000572290 SCGNO76038 276 aa15.87■□□□□ 0.13
NUP88-204ENST00000572290 SRSF7Q16629 238 aaKnown RBP eCLIP15.87■□□□□ 0.13
NUP88-204ENST00000572290 TIMM50Q3ZCQ8 353 aa15.87■□□□□ 0.13
NUP88-204ENST00000572290 IGSF11Q5DX21 431 aa15.87■□□□□ 0.13
NUP88-204ENST00000572290 GLDNQ6ZMI3 551 aaPredicted RBP15.87■□□□□ 0.13
NUP88-204ENST00000572290 GON7Q9BXV9 100 aa15.87■□□□□ 0.13
NUP88-204ENST00000572290 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP15.87■□□□□ 0.13
NUP88-204ENST00000572290 ZNF107Q9UII5 783 aaPredicted RBP15.87■□□□□ 0.13
NUP88-204ENST00000572290 ELF5Q9UKW6 265 aaPredicted RBP15.87■□□□□ 0.13
NUP88-204ENST00000572290 TRBV6-7A0A0A0MS04 114 aa15.86■□□□□ 0.13
NUP88-204ENST00000572290 OR5H14A6NHG9 310 aa15.86■□□□□ 0.13
NUP88-204ENST00000572290 G3V4G9 280 aa15.86■□□□□ 0.13
NUP88-204ENST00000572290 H0YJW9 148 aa15.86■□□□□ 0.13
NUP88-204ENST00000572290 DIRAS3O95661 229 aa15.86■□□□□ 0.13
NUP88-204ENST00000572290 CNTFRP26992 372 aa15.86■□□□□ 0.13
NUP88-204ENST00000572290 MC5RP33032 325 aa15.86■□□□□ 0.13
NUP88-204ENST00000572290 SCAND1P57086 179 aa15.86■□□□□ 0.13
NUP88-204ENST00000572290 PNLIPRP3Q17RR3 467 aa15.86■□□□□ 0.13
NUP88-204ENST00000572290 NPBQ8NG41 125 aa15.86■□□□□ 0.13
NUP88-204ENST00000572290 OR10J5Q8NHC4 309 aa15.86■□□□□ 0.13
NUP88-204ENST00000572290 RHBDL2Q9NX52 303 aa15.86■□□□□ 0.13
NUP88-204ENST00000572290 KIAA1456Q9P272 454 aa15.86■□□□□ 0.13
NUP88-204ENST00000572290 PROP1O75360 226 aa15.85■□□□□ 0.13
NUP88-204ENST00000572290 PF4P02776 101 aa15.85■□□□□ 0.13
NUP88-204ENST00000572290 DTYMKP23919 212 aa15.85■□□□□ 0.13
NUP88-204ENST00000572290 RPL23AP62750 156 aaKnown RBP15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms