RNA–Protein interactions for RNA: ENST00000572174.5

RPAIN-211, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 597 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-211ENST00000572174 DIAPH2-AS1Q14236 149 aa11.14□□□□□ -0.63
RPAIN-211ENST00000572174 C2orf68Q2NKX9 166 aa11.14□□□□□ -0.63
RPAIN-211ENST00000572174 ZNF260Q3ZCT1 412 aa11.14□□□□□ -0.63
RPAIN-211ENST00000572174 ABCA11PQ4W5N1 156 aa11.14□□□□□ -0.63
RPAIN-211ENST00000572174 MZT2AQ6P582 158 aa11.14□□□□□ -0.63
RPAIN-211ENST00000572174 Q6ZPA2 131 aa11.14□□□□□ -0.63
RPAIN-211ENST00000572174 KLHDC1Q8N7A1 406 aa11.14□□□□□ -0.63
RPAIN-211ENST00000572174 TAF15Q92804 592 aaKnown RBP eCLIP11.14□□□□□ -0.63
RPAIN-211ENST00000572174 SLC25A38Q96DW6 304 aa11.14□□□□□ -0.63
RPAIN-211ENST00000572174 LIN7CQ9NUP9 197 aaKnown RBP11.14□□□□□ -0.63
RPAIN-211ENST00000572174 RBM7Q9Y580 266 aaKnown RBP11.14□□□□□ -0.63
RPAIN-211ENST00000572174 TRBV6-7A0A0A0MS04 114 aa11.13□□□□□ -0.63
RPAIN-211ENST00000572174 SMIM31A0A1B0GVY4 71 aa11.13□□□□□ -0.63
RPAIN-211ENST00000572174 NCBP2LA6PVI3 153 aaKnown RBP11.13□□□□□ -0.63
RPAIN-211ENST00000572174 BET1O15155 118 aa11.13□□□□□ -0.63
RPAIN-211ENST00000572174 ST8SIA5O15466 376 aa11.13□□□□□ -0.63
RPAIN-211ENST00000572174 KCNAB3O43448 404 aa11.13□□□□□ -0.63
RPAIN-211ENST00000572174 RBBP9O75884 186 aa11.13□□□□□ -0.63
RPAIN-211ENST00000572174 VSIG10L2P0DP72 767 aa11.13□□□□□ -0.63
RPAIN-211ENST00000572174 SOX6P35712 828 aa11.13□□□□□ -0.63
RPAIN-211ENST00000572174 GPR12P47775 334 aa11.13□□□□□ -0.63
RPAIN-211ENST00000572174 VBP1P61758 197 aa11.13□□□□□ -0.63
RPAIN-211ENST00000572174 TAGLNQ01995 201 aaKnown RBP11.13□□□□□ -0.63
RPAIN-211ENST00000572174 CBX3Q13185 183 aa11.13□□□□□ -0.63
RPAIN-211ENST00000572174 PRR31Q5SQ13 230 aa11.13□□□□□ -0.63
RPAIN-211ENST00000572174 C5orf56Q8N8D9 126 aa11.13□□□□□ -0.63
RPAIN-211ENST00000572174 SAMD12Q8N8I0 201 aa11.13□□□□□ -0.63
RPAIN-211ENST00000572174 OR5H6Q8NGV6 325 aa11.13□□□□□ -0.63
RPAIN-211ENST00000572174 RAB2BQ8WUD1 216 aa11.13□□□□□ -0.63
RPAIN-211ENST00000572174 EAF1Q96JC9 268 aaPredicted RBP11.13□□□□□ -0.63
RPAIN-211ENST00000572174 GON7Q9BXV9 100 aa11.13□□□□□ -0.63
RPAIN-211ENST00000572174 SERTAD4Q9NUC0 356 aa11.13□□□□□ -0.63
RPAIN-211ENST00000572174 RDH8Q9NYR8 311 aa11.13□□□□□ -0.63
RPAIN-211ENST00000572174 OR1A1Q9P1Q5 309 aa11.13□□□□□ -0.63
RPAIN-211ENST00000572174 DNHD1Q96M86 4753 aa11.12□□□□□ -0.63
RPAIN-211ENST00000572174 TRAV18A0A075B6X5 111 aa11.12□□□□□ -0.63
RPAIN-211ENST00000572174 IGHV3-72A0A0B4J1Y9 119 aa11.12□□□□□ -0.63
RPAIN-211ENST00000572174 XRCC3O43542 346 aa11.12□□□□□ -0.63
RPAIN-211ENST00000572174 FBXO24O75426 580 aa11.12□□□□□ -0.63
RPAIN-211ENST00000572174 SLC22A5O76082 557 aa11.12□□□□□ -0.63
RPAIN-211ENST00000572174 APOA1P02647 267 aa11.12□□□□□ -0.63
RPAIN-211ENST00000572174 APOA2P02652 100 aa11.12□□□□□ -0.63
RPAIN-211ENST00000572174 RPL5P46777 297 aaKnown RBP11.12□□□□□ -0.63
RPAIN-211ENST00000572174 ALDH3B2P48448 385 aa11.12□□□□□ -0.63
RPAIN-211ENST00000572174 NCS1P62166 190 aa11.12□□□□□ -0.63
RPAIN-211ENST00000572174 BLCAPP62952 87 aa11.12□□□□□ -0.63
RPAIN-211ENST00000572174 HNF4GQ14541 408 aa11.12□□□□□ -0.63
RPAIN-211ENST00000572174 C9orf152Q5JTZ5 239 aa11.12□□□□□ -0.63
RPAIN-211ENST00000572174 TMEM69Q5SWH9 247 aa11.12□□□□□ -0.63
RPAIN-211ENST00000572174 GPR107Q5VW38 600 aa11.12□□□□□ -0.63
RPAIN-211ENST00000572174 CNIH2Q6PI25 160 aa11.12□□□□□ -0.63
RPAIN-211ENST00000572174 FOXRED2Q8IWF2 684 aa11.12□□□□□ -0.63
RPAIN-211ENST00000572174 ODF3L1Q8IXM7 274 aa11.12□□□□□ -0.63
RPAIN-211ENST00000572174 OR4X2Q8NGF9 303 aa11.12□□□□□ -0.63
RPAIN-211ENST00000572174 NUDCD2Q8WVJ2 157 aa11.12□□□□□ -0.63
RPAIN-211ENST00000572174 RASL11BQ9BPW5 248 aa11.12□□□□□ -0.63
RPAIN-211ENST00000572174 NABP2Q9BQ15 211 aa11.12□□□□□ -0.63
RPAIN-211ENST00000572174 ST6GALNAC5Q9BVH7 336 aa11.12□□□□□ -0.63
RPAIN-211ENST00000572174 C11orf54Q9H0W9 315 aaPredicted RBP11.12□□□□□ -0.63
RPAIN-211ENST00000572174 KIAA1456Q9P272 454 aa11.12□□□□□ -0.63
RPAIN-211ENST00000572174 SCOCQ9UIL1 159 aa11.12□□□□□ -0.63
RPAIN-211ENST00000572174 GAB2Q9UQC2 676 aa11.12□□□□□ -0.63
RPAIN-211ENST00000572174 TFAP2AP05549 437 aa11.11□□□□□ -0.63
RPAIN-211ENST00000572174 GSTT2P0CG29 244 aa11.11□□□□□ -0.63
RPAIN-211ENST00000572174 GSTT2BP0CG30 244 aa11.11□□□□□ -0.63
RPAIN-211ENST00000572174 TGFBR1P36897 503 aa11.11□□□□□ -0.63
RPAIN-211ENST00000572174 ARPC4P59998 168 aa11.11□□□□□ -0.63
RPAIN-211ENST00000572174 CTF1Q16619 201 aa11.11□□□□□ -0.63
RPAIN-211ENST00000572174 FAM53AQ6NSI3 398 aaPredicted RBP11.11□□□□□ -0.63
RPAIN-211ENST00000572174 Q8N6K4 173 aa11.11□□□□□ -0.63
RPAIN-211ENST00000572174 CHPT1Q8WUD6 406 aa11.11□□□□□ -0.63
RPAIN-211ENST00000572174 ADTRPQ96IZ2 230 aa11.11□□□□□ -0.63
RPAIN-211ENST00000572174 RNF5Q99942 180 aa11.11□□□□□ -0.63
RPAIN-211ENST00000572174 ZNF251Q9BRH9 671 aa11.11□□□□□ -0.63
RPAIN-211ENST00000572174 AGMATQ9BSE5 352 aa11.11□□□□□ -0.63
RPAIN-211ENST00000572174 MRPL20Q9BYC9 149 aaKnown RBP11.11□□□□□ -0.63
RPAIN-211ENST00000572174 IFT46Q9NQC8 304 aa11.11□□□□□ -0.63
RPAIN-211ENST00000572174 ZNF230Q9UIE0 474 aaPredicted RBP11.11□□□□□ -0.63
RPAIN-211ENST00000572174 ANXA10Q9UJ72 324 aa11.11□□□□□ -0.63
RPAIN-211ENST00000572174 WASHC3Q9Y3C0 194 aa11.11□□□□□ -0.63
RPAIN-211ENST00000572174 IGKV1-6A0A0C4DH72 117 aa11.1□□□□□ -0.63
RPAIN-211ENST00000572174 OPN1MWP04001 364 aa11.1□□□□□ -0.63
RPAIN-211ENST00000572174 OPN1MW2P0DN77 364 aa11.1□□□□□ -0.63
RPAIN-211ENST00000572174 OPN1MW3P0DN78 364 aa11.1□□□□□ -0.63
RPAIN-211ENST00000572174 OR3A3P47888 321 aa11.1□□□□□ -0.63
RPAIN-211ENST00000572174 TMBIM6P55061 237 aa11.1□□□□□ -0.63
RPAIN-211ENST00000572174 SLC35B1P78383 322 aa11.1□□□□□ -0.63
RPAIN-211ENST00000572174 MMDQ15546 238 aa11.1□□□□□ -0.63
RPAIN-211ENST00000572174 IGSF11Q5DX21 431 aa11.1□□□□□ -0.63
RPAIN-211ENST00000572174 SLC35E3Q7Z769 313 aa11.1□□□□□ -0.63
RPAIN-211ENST00000572174 CENPVQ7Z7K6 275 aaPredicted RBP11.1□□□□□ -0.63
RPAIN-211ENST00000572174 COMMD1Q8N668 190 aa11.1□□□□□ -0.63
RPAIN-211ENST00000572174 BEST4Q8NFU0 473 aa11.1□□□□□ -0.63
RPAIN-211ENST00000572174 C15orf40Q8WUR7 153 aa11.1□□□□□ -0.63
RPAIN-211ENST00000572174 MAFIPQ8WZ33 124 aa11.1□□□□□ -0.63
RPAIN-211ENST00000572174 ABHD14BQ96IU4 210 aa11.1□□□□□ -0.63
RPAIN-211ENST00000572174 CYYR1Q96J86 154 aa11.1□□□□□ -0.63
RPAIN-211ENST00000572174 WNT10AQ9GZT5 417 aa11.1□□□□□ -0.63
RPAIN-211ENST00000572174 OR2D2Q9H210 308 aa11.1□□□□□ -0.63
RPAIN-211ENST00000572174 AUNIPQ9H7T9 357 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms