RNA–Protein interactions for RNA: ENST00000569916.1

CNOT1-220, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-220ENST00000569916 METTL21EPA6NDL7 271 aa10.29□□□□□ -0.76
CNOT1-220ENST00000569916 LINC01548A6NM66 108 aa10.29□□□□□ -0.76
CNOT1-220ENST00000569916 SERPINE3A8MV23 424 aa10.29□□□□□ -0.76
CNOT1-220ENST00000569916 TRDCB7Z8K6 153 aa10.29□□□□□ -0.76
CNOT1-220ENST00000569916 KCNAB3O43448 404 aa10.29□□□□□ -0.76
CNOT1-220ENST00000569916 WIPF1O43516 503 aa10.29□□□□□ -0.76
CNOT1-220ENST00000569916 CLEC2LP0C7M8 214 aa10.29□□□□□ -0.76
CNOT1-220ENST00000569916 SDC2P34741 201 aa10.29□□□□□ -0.76
CNOT1-220ENST00000569916 GPR12P47775 334 aa10.29□□□□□ -0.76
CNOT1-220ENST00000569916 F2RL1P55085 397 aa10.29□□□□□ -0.76
CNOT1-220ENST00000569916 MRPS15P82914 257 aaKnown RBP10.29□□□□□ -0.76
CNOT1-220ENST00000569916 RPL39P5Q59GN2 51 aa10.29□□□□□ -0.76
CNOT1-220ENST00000569916 OR4F17Q8NGA8 305 aa10.29□□□□□ -0.76
CNOT1-220ENST00000569916 CHPT1Q8WUD6 406 aa10.29□□□□□ -0.76
CNOT1-220ENST00000569916 EDARADDQ8WWZ3 215 aa10.29□□□□□ -0.76
CNOT1-220ENST00000569916 R3HDM4Q96D70 268 aa10.29□□□□□ -0.76
CNOT1-220ENST00000569916 ABHD14BQ96IU4 210 aa10.29□□□□□ -0.76
CNOT1-220ENST00000569916 OR4F4Q96R69 305 aa10.29□□□□□ -0.76
CNOT1-220ENST00000569916 CENPOQ9BU64 300 aa10.29□□□□□ -0.76
CNOT1-220ENST00000569916 C11orf54Q9H0W9 315 aaPredicted RBP10.29□□□□□ -0.76
CNOT1-220ENST00000569916 DAPK2Q9UIK4 370 aa10.29□□□□□ -0.76
CNOT1-220ENST00000569916 LINC00527Q9UJ94 153 aa10.29□□□□□ -0.76
CNOT1-220ENST00000569916 TSSC4Q9Y5U2 329 aaPredicted RBP10.29□□□□□ -0.76
CNOT1-220ENST00000569916 LOC100506127A0A0U1RQW1 187 aa10.28□□□□□ -0.76
CNOT1-220ENST00000569916 TCRBV4S1A1TA0A5B7 111 aa10.28□□□□□ -0.76
CNOT1-220ENST00000569916 RAB29O14966 203 aa10.28□□□□□ -0.76
CNOT1-220ENST00000569916 FABP7O15540 132 aa10.28□□□□□ -0.76
CNOT1-220ENST00000569916 HSPA12AO43301 675 aa10.28□□□□□ -0.76
CNOT1-220ENST00000569916 SNRPBP14678 240 aaKnown RBP10.28□□□□□ -0.76
CNOT1-220ENST00000569916 CEACAM6P40199 344 aa10.28□□□□□ -0.76
CNOT1-220ENST00000569916 ACTBP60709 375 aa10.28□□□□□ -0.76
CNOT1-220ENST00000569916 DEFA6Q01524 100 aa10.28□□□□□ -0.76
CNOT1-220ENST00000569916 MXD1Q05195 221 aa10.28□□□□□ -0.76
CNOT1-220ENST00000569916 MMDQ15546 238 aa10.28□□□□□ -0.76
CNOT1-220ENST00000569916 ZNF329Q86UD4 541 aa10.28□□□□□ -0.76
CNOT1-220ENST00000569916 FOXRED2Q8IWF2 684 aa10.28□□□□□ -0.76
CNOT1-220ENST00000569916 STPG2Q8N412 459 aa10.28□□□□□ -0.76
CNOT1-220ENST00000569916 TSPAN14Q8NG11 270 aa10.28□□□□□ -0.76
CNOT1-220ENST00000569916 OR4A4PQ8NGN8 299 aa10.28□□□□□ -0.76
CNOT1-220ENST00000569916 LGALS14Q8TCE9 139 aa10.28□□□□□ -0.76
CNOT1-220ENST00000569916 RASL11BQ9BPW5 248 aa10.28□□□□□ -0.76
CNOT1-220ENST00000569916 HSPB9Q9BQS6 159 aa10.28□□□□□ -0.76
CNOT1-220ENST00000569916 CABLES2Q9BTV7 478 aa10.28□□□□□ -0.76
CNOT1-220ENST00000569916 TOLLIPQ9H0E2 274 aa10.28□□□□□ -0.76
CNOT1-220ENST00000569916 ATG5Q9H1Y0 275 aa10.28□□□□□ -0.76
CNOT1-220ENST00000569916 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.28□□□□□ -0.76
CNOT1-220ENST00000569916 AP4M1O00189 453 aa10.27□□□□□ -0.77
CNOT1-220ENST00000569916 TNFAIP8O95379 198 aa10.27□□□□□ -0.77
CNOT1-220ENST00000569916 CT45A6P0DMU7 189 aa10.27□□□□□ -0.77
CNOT1-220ENST00000569916 CT45A5P0DMU8 189 aa10.27□□□□□ -0.77
CNOT1-220ENST00000569916 CT45A7P0DMV0 189 aa10.27□□□□□ -0.77
CNOT1-220ENST00000569916 CNTFRP26992 372 aa10.27□□□□□ -0.77
CNOT1-220ENST00000569916 KIR2DS1Q14954 304 aa10.27□□□□□ -0.77
CNOT1-220ENST00000569916 FAM131AQ6UXB0 335 aa10.27□□□□□ -0.77
CNOT1-220ENST00000569916 C1QL4Q86Z23 238 aa10.27□□□□□ -0.77
CNOT1-220ENST00000569916 MAFIPQ8WZ33 124 aa10.27□□□□□ -0.77
CNOT1-220ENST00000569916 RITA1Q96K30 269 aa10.27□□□□□ -0.77
CNOT1-220ENST00000569916 GHITMQ9H3K2 345 aa10.27□□□□□ -0.77
CNOT1-220ENST00000569916 RDH8Q9NYR8 311 aa10.27□□□□□ -0.77
CNOT1-220ENST00000569916 ZNF230Q9UIE0 474 aaPredicted RBP10.27□□□□□ -0.77
CNOT1-220ENST00000569916 ELF5Q9UKW6 265 aaPredicted RBP10.27□□□□□ -0.77
CNOT1-220ENST00000569916 NOTCH1P46531 2555 aa10.26□□□□□ -0.77
CNOT1-220ENST00000569916 A0A087WXM4 84 aa10.26□□□□□ -0.77
CNOT1-220ENST00000569916 OR5H14A6NHG9 310 aa10.26□□□□□ -0.77
CNOT1-220ENST00000569916 G3V4G9 280 aa10.26□□□□□ -0.77
CNOT1-220ENST00000569916 H0YJW9 148 aa10.26□□□□□ -0.77
CNOT1-220ENST00000569916 NBR2O15453 112 aa10.26□□□□□ -0.77
CNOT1-220ENST00000569916 PROP1O75360 226 aa10.26□□□□□ -0.77
CNOT1-220ENST00000569916 DIRAS3O95661 229 aa10.26□□□□□ -0.77
CNOT1-220ENST00000569916 GSTT2P0CG29 244 aa10.26□□□□□ -0.77
CNOT1-220ENST00000569916 GSTT2BP0CG30 244 aa10.26□□□□□ -0.77
CNOT1-220ENST00000569916 SOX6P35712 828 aa10.26□□□□□ -0.77
CNOT1-220ENST00000569916 SERPINB10P48595 397 aa10.26□□□□□ -0.77
CNOT1-220ENST00000569916 ARFRP1Q13795 201 aa10.26□□□□□ -0.77
CNOT1-220ENST00000569916 ARL6IP1Q15041 203 aa10.26□□□□□ -0.77
CNOT1-220ENST00000569916 IGSF11Q5DX21 431 aa10.26□□□□□ -0.77
CNOT1-220ENST00000569916 KHDC1LQ5JSQ8 128 aa10.26□□□□□ -0.77
CNOT1-220ENST00000569916 GLDNQ6ZMI3 551 aaPredicted RBP10.26□□□□□ -0.77
CNOT1-220ENST00000569916 Q6ZS49 121 aa10.26□□□□□ -0.77
CNOT1-220ENST00000569916 PHF21AQ96BD5 680 aa10.26□□□□□ -0.77
CNOT1-220ENST00000569916 IGKV1D-8A0A087WSZ0 117 aa10.25□□□□□ -0.77
CNOT1-220ENST00000569916 TRBV6-7A0A0A0MS04 114 aa10.25□□□□□ -0.77
CNOT1-220ENST00000569916 TRIM64CA6NLI5 447 aa10.25□□□□□ -0.77
CNOT1-220ENST00000569916 BET1O15155 118 aa10.25□□□□□ -0.77
CNOT1-220ENST00000569916 NDUFA3O95167 84 aa10.25□□□□□ -0.77
CNOT1-220ENST00000569916 PF4V1P10720 104 aa10.25□□□□□ -0.77
CNOT1-220ENST00000569916 DTYMKP23919 212 aa10.25□□□□□ -0.77
CNOT1-220ENST00000569916 TGFBR1P36897 503 aa10.25□□□□□ -0.77
CNOT1-220ENST00000569916 SCAND1P57086 179 aa10.25□□□□□ -0.77
CNOT1-220ENST00000569916 SLC35B1P78383 322 aa10.25□□□□□ -0.77
CNOT1-220ENST00000569916 SRSF7Q16629 238 aaKnown RBP eCLIP10.25□□□□□ -0.776e-6■□□□□ 11.2
CNOT1-220ENST00000569916 TIMM50Q3ZCQ8 353 aa10.25□□□□□ -0.77
CNOT1-220ENST00000569916 CDNFQ49AH0 187 aa10.25□□□□□ -0.77
CNOT1-220ENST00000569916 SAMD5Q5TGI4 173 aa10.25□□□□□ -0.77
CNOT1-220ENST00000569916 HACD4Q5VWC8 232 aa10.25□□□□□ -0.77
CNOT1-220ENST00000569916 NPBQ8NG41 125 aa10.25□□□□□ -0.77
CNOT1-220ENST00000569916 OR5AN1Q8NGI8 311 aa10.25□□□□□ -0.77
CNOT1-220ENST00000569916 OR5H6Q8NGV6 325 aa10.25□□□□□ -0.77
CNOT1-220ENST00000569916 SLC25A38Q96DW6 304 aa10.25□□□□□ -0.77
CNOT1-220ENST00000569916 YIPF6Q96EC8 236 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms