RNA–Protein interactions for RNA: ENST00000569518.5

VCPKMT-205, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 2

Gene VCPKMT, Length 1,827 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-205ENST00000569518 ESCO2Q56NI9 601 aa18.62■□□□□ 0.57
VCPKMT-205ENST00000569518 OR8H1Q8NGG4 311 aa18.62■□□□□ 0.57
VCPKMT-205ENST00000569518 DCUN1D4Q92564 292 aa18.62■□□□□ 0.57
VCPKMT-205ENST00000569518 RRNAD1Q96FB5 475 aaKnown RBP18.62■□□□□ 0.57
VCPKMT-205ENST00000569518 RAB1BQ9H0U4 201 aa18.62■□□□□ 0.57
VCPKMT-205ENST00000569518 C19orf12Q9NSK7 152 aa18.62■□□□□ 0.57
VCPKMT-205ENST00000569518 GFOD1Q9NXC2 390 aa18.62■□□□□ 0.57
VCPKMT-205ENST00000569518 CLEC18AA5D8T8 446 aa18.61■□□□□ 0.57
VCPKMT-205ENST00000569518 SERPINE2P07093 398 aa18.61■□□□□ 0.57
VCPKMT-205ENST00000569518 AP2S1P53680 142 aaPredicted RBP18.61■□□□□ 0.57
VCPKMT-205ENST00000569518 S100A10P60903 97 aa18.61■□□□□ 0.57
VCPKMT-205ENST00000569518 ZNF585BQ52M93 769 aa18.61■□□□□ 0.57
VCPKMT-205ENST00000569518 UTF1Q5T230 341 aa18.61■□□□□ 0.57
VCPKMT-205ENST00000569518 CLEC18CQ8NCF0 446 aa18.61■□□□□ 0.57
VCPKMT-205ENST00000569518 OR52M1Q8NGK5 317 aa18.61■□□□□ 0.57
VCPKMT-205ENST00000569518 OR4D5Q8NGN0 318 aa18.61■□□□□ 0.57
VCPKMT-205ENST00000569518 OR1S1Q8NH92 325 aa18.61■□□□□ 0.57
VCPKMT-205ENST00000569518 ABHD14BQ96IU4 210 aa18.61■□□□□ 0.57
VCPKMT-205ENST00000569518 SDHAF2Q9NX18 166 aa18.61■□□□□ 0.57
VCPKMT-205ENST00000569518 USF3Q68DE3 2245 aa18.61■□□□□ 0.57
VCPKMT-205ENST00000569518 EPG5Q9HCE0 2579 aa18.61■□□□□ 0.57
VCPKMT-205ENST00000569518 ITGB1BP1O14713 200 aa18.6■□□□□ 0.57
VCPKMT-205ENST00000569518 IGKV1-39P01597 117 aa18.6■□□□□ 0.57
VCPKMT-205ENST00000569518 MBPP02686 304 aaPredicted RBP18.6■□□□□ 0.57
VCPKMT-205ENST00000569518 IGKV1D-39P04432 117 aa18.6■□□□□ 0.57
VCPKMT-205ENST00000569518 TMEM30BQ3MIR4 351 aa18.6■□□□□ 0.57
VCPKMT-205ENST00000569518 ZNF680Q8NEM1 530 aa18.6■□□□□ 0.57
VCPKMT-205ENST00000569518 PLEKHF2Q9H8W4 249 aa18.6■□□□□ 0.57
VCPKMT-205ENST00000569518 TAS2R3Q9NYW6 316 aa18.6■□□□□ 0.57
VCPKMT-205ENST00000569518 PIGBOS1A0A0B4J2F0 54 aa18.6■□□□□ 0.57
VCPKMT-205ENST00000569518 NDUFB3O43676 98 aa18.6■□□□□ 0.57
VCPKMT-205ENST00000569518 DEDDO75618 318 aa18.6■□□□□ 0.57
VCPKMT-205ENST00000569518 IGHV2-70P01814 119 aa18.6■□□□□ 0.57
VCPKMT-205ENST00000569518 ZNF134P52741 427 aa18.6■□□□□ 0.57
VCPKMT-205ENST00000569518 RPL30P62888 115 aaKnown RBP18.6■□□□□ 0.57
VCPKMT-205ENST00000569518 RPL31P62899 125 aaKnown RBP18.6■□□□□ 0.57
VCPKMT-205ENST00000569518 LRRC10Q5BKY1 277 aa18.6■□□□□ 0.57
VCPKMT-205ENST00000569518 INO80EQ8NBZ0 244 aaPredicted RBP18.6■□□□□ 0.57
VCPKMT-205ENST00000569518 DVL1O14640 695 aa18.59■□□□□ 0.57
VCPKMT-205ENST00000569518 KCNAB3O43448 404 aa18.59■□□□□ 0.57
VCPKMT-205ENST00000569518 CFDP00746 253 aaPredicted RBP18.59■□□□□ 0.57
VCPKMT-205ENST00000569518 MRPS11P82912 194 aaKnown RBP18.59■□□□□ 0.57
VCPKMT-205ENST00000569518 ZNF273Q14593 569 aa18.59■□□□□ 0.57
VCPKMT-205ENST00000569518 SPIN2AQ99865 258 aa18.59■□□□□ 0.57
VCPKMT-205ENST00000569518 SPIN2BQ9BPZ2 258 aa18.59■□□□□ 0.57
VCPKMT-205ENST00000569518 IFI27L2Q9H2X8 130 aa18.59■□□□□ 0.57
VCPKMT-205ENST00000569518 IDI2-AS1Q9NZ38 188 aa18.59■□□□□ 0.57
VCPKMT-205ENST00000569518 DOPEY1Q5JWR5 2465 aa18.59■□□□□ 0.57
VCPKMT-205ENST00000569518 LPAR3Q9UBY5 353 aa18.58■□□□□ 0.57
VCPKMT-205ENST00000569518 K7EPK0 472 aa18.58■□□□□ 0.56
VCPKMT-205ENST00000569518 PROP1O75360 226 aa18.58■□□□□ 0.56
VCPKMT-205ENST00000569518 ZNF16P17020 682 aaPredicted RBP18.58■□□□□ 0.56
VCPKMT-205ENST00000569518 Q3ZCU0 254 aa18.58■□□□□ 0.56
VCPKMT-205ENST00000569518 BTNL3Q6UXE8 466 aa18.58■□□□□ 0.56
VCPKMT-205ENST00000569518 ZNF66Q6ZN08 573 aa18.58■□□□□ 0.56
VCPKMT-205ENST00000569518 ZNF843Q8N446 348 aa18.58■□□□□ 0.56
VCPKMT-205ENST00000569518 FAM71E2Q8N5Q1 922 aa18.58■□□□□ 0.56
VCPKMT-205ENST00000569518 ZNF439Q8NDP4 499 aa18.58■□□□□ 0.56
VCPKMT-205ENST00000569518 NEU4Q8WWR8 484 aaPredicted RBP18.58■□□□□ 0.56
VCPKMT-205ENST00000569518 AQP10Q96PS8 301 aa18.58■□□□□ 0.56
VCPKMT-205ENST00000569518 FLNCQ14315 2725 aa18.57■□□□□ 0.56
VCPKMT-205ENST00000569518 A0A0G2JRQ6 117 aa18.57■□□□□ 0.56
VCPKMT-205ENST00000569518 MSGN1A6NI15 193 aa18.57■□□□□ 0.56
VCPKMT-205ENST00000569518 A6NNC1 897 aa18.57■□□□□ 0.56
VCPKMT-205ENST00000569518 SLC31A2O15432 143 aa18.57■□□□□ 0.56
VCPKMT-205ENST00000569518 BCL2L11O43521 198 aa18.57■□□□□ 0.56
VCPKMT-205ENST00000569518 MMP23AO75900 390 aa18.57■□□□□ 0.56
VCPKMT-205ENST00000569518 BRWD1-AS2P59051 145 aa18.57■□□□□ 0.56
VCPKMT-205ENST00000569518 TMEM200BQ69YZ2 307 aa18.57■□□□□ 0.56
VCPKMT-205ENST00000569518 FOXRED2Q8IWF2 684 aa18.57■□□□□ 0.56
VCPKMT-205ENST00000569518 HSD17B10Q99714 261 aaKnown RBP18.57■□□□□ 0.56
VCPKMT-205ENST00000569518 FAM212BQ9NTI7 297 aaPredicted RBP18.57■□□□□ 0.56
VCPKMT-205ENST00000569518 ZFP57Q9NU63 452 aa18.57■□□□□ 0.56
VCPKMT-205ENST00000569518 RPUSD1Q9UJJ7 312 aaKnown RBP18.57■□□□□ 0.56
VCPKMT-205ENST00000569518 DCHS2Q6V1P9 2916 aa18.56■□□□□ 0.56
VCPKMT-205ENST00000569518 SCGB1D2O95969 90 aa18.56■□□□□ 0.56
VCPKMT-205ENST00000569518 GPR12P47775 334 aa18.56■□□□□ 0.56
VCPKMT-205ENST00000569518 CATR1Q13166 79 aa18.56■□□□□ 0.56
VCPKMT-205ENST00000569518 EXOSC2Q13868 293 aaKnown RBP18.56■□□□□ 0.56
VCPKMT-205ENST00000569518 PRAMEF5Q5TYX0 476 aa18.56■□□□□ 0.56
VCPKMT-205ENST00000569518 OR10A7Q8NGE5 316 aa18.56■□□□□ 0.56
VCPKMT-205ENST00000569518 LEAP2Q969E1 77 aa18.56■□□□□ 0.56
VCPKMT-205ENST00000569518 LSM10Q969L4 123 aaKnown RBP18.56■□□□□ 0.56
VCPKMT-205ENST00000569518 ABHD14AQ9BUJ0 271 aa18.56■□□□□ 0.56
VCPKMT-205ENST00000569518 GAL3ST2Q9H3Q3 398 aa18.56■□□□□ 0.56
VCPKMT-205ENST00000569518 LAMP3Q9UQV4 416 aa18.56■□□□□ 0.56
VCPKMT-205ENST00000569518 LSM5Q9Y4Y9 91 aaKnown RBP18.56■□□□□ 0.56
VCPKMT-205ENST00000569518 C1QL1O75973 258 aa18.56■□□□□ 0.56
VCPKMT-205ENST00000569518 LY6HO94772 140 aa18.56■□□□□ 0.56
VCPKMT-205ENST00000569518 CLDN1O95832 211 aa18.56■□□□□ 0.56
VCPKMT-205ENST00000569518 IGKV1-5P01602 117 aa18.56■□□□□ 0.56
VCPKMT-205ENST00000569518 IGHV3-7P01780 117 aa18.56■□□□□ 0.56
VCPKMT-205ENST00000569518 SLC25A6P12236 298 aa18.56■□□□□ 0.56
VCPKMT-205ENST00000569518 RAB7AP51149 207 aa18.56■□□□□ 0.56
VCPKMT-205ENST00000569518 CT45A1Q5HYN5 189 aa18.56■□□□□ 0.56
VCPKMT-205ENST00000569518 TCTEX1D1Q8N7M0 179 aa18.56■□□□□ 0.56
VCPKMT-205ENST00000569518 CT45A3Q8NHU0 189 aa18.56■□□□□ 0.56
VCPKMT-205ENST00000569518 GAB2Q9UQC2 676 aa18.56■□□□□ 0.56
VCPKMT-205ENST00000569518 POMT1Q9Y6A1 747 aa18.56■□□□□ 0.56
VCPKMT-205ENST00000569518 USP9XQ93008 2570 aaPredicted RBP18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms