RNA–Protein interactions for RNA: ENST00000569454.1

CDH13-213, Transcript of cadherin 13, humanhuman

TSL 3

Gene CDH13, Length 877 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-213ENST00000569454 WASF3Q9UPY6 502 aa4.83□□□□□ -1.64
CDH13-213ENST00000569454 KPTNQ9Y664 436 aa4.83□□□□□ -1.64
CDH13-213ENST00000569454 RTTNQ86VV8 2226 aa4.82□□□□□ -1.64
CDH13-213ENST00000569454 A0A1B0GW64 132 aa4.82□□□□□ -1.64
CDH13-213ENST00000569454 A0A1W2PR80 420 aa4.82□□□□□ -1.64
CDH13-213ENST00000569454 FAM90A9PA6NNJ1 464 aa4.82□□□□□ -1.64
CDH13-213ENST00000569454 SRRM5B3KS81 715 aa4.82□□□□□ -1.64
CDH13-213ENST00000569454 F8W036 122 aa4.82□□□□□ -1.64
CDH13-213ENST00000569454 PRRG2O14669 202 aa4.82□□□□□ -1.64
CDH13-213ENST00000569454 KLK10O43240 276 aa4.82□□□□□ -1.64
CDH13-213ENST00000569454 SSSCA1O60232 199 aa4.82□□□□□ -1.64
CDH13-213ENST00000569454 ZNF205O95201 554 aa4.82□□□□□ -1.64
CDH13-213ENST00000569454 IFNA5P01569 189 aa4.82□□□□□ -1.64
CDH13-213ENST00000569454 HBE1P02100 147 aa4.82□□□□□ -1.64
CDH13-213ENST00000569454 PRH1P02810 166 aa4.82□□□□□ -1.64
CDH13-213ENST00000569454 GZMHP20718 246 aa4.82□□□□□ -1.64
CDH13-213ENST00000569454 TNFSF4P23510 183 aa4.82□□□□□ -1.64
CDH13-213ENST00000569454 CEACAM8P31997 349 aaPredicted RBP4.82□□□□□ -1.64
CDH13-213ENST00000569454 LPAR6P43657 344 aa4.82□□□□□ -1.64
CDH13-213ENST00000569454 GATA4P43694 442 aa4.82□□□□□ -1.64
CDH13-213ENST00000569454 GABRA2P47869 451 aa4.82□□□□□ -1.64
CDH13-213ENST00000569454 CAMLGP49069 296 aa4.82□□□□□ -1.64
CDH13-213ENST00000569454 SULT1A1P50225 295 aa4.82□□□□□ -1.64
CDH13-213ENST00000569454 KLF3P57682 345 aaPredicted RBP4.82□□□□□ -1.64
CDH13-213ENST00000569454 ERVS71-1P61550 626 aa4.82□□□□□ -1.64
CDH13-213ENST00000569454 POLR2GP62487 172 aaKnown RBP eCLIP4.82□□□□□ -1.64
CDH13-213ENST00000569454 DEFA5Q01523 94 aa4.82□□□□□ -1.64
CDH13-213ENST00000569454 FOXF2Q12947 444 aa4.82□□□□□ -1.64
CDH13-213ENST00000569454 SRSF6Q13247 344 aaKnown RBP4.82□□□□□ -1.64
CDH13-213ENST00000569454 ZNF273Q14593 569 aa4.82□□□□□ -1.64
CDH13-213ENST00000569454 PEA15Q15121 130 aa4.82□□□□□ -1.64
CDH13-213ENST00000569454 C21orf62-AS1Q17RA5 79 aa4.82□□□□□ -1.64
CDH13-213ENST00000569454 C20orf204Q6ZNR8 217 aa4.82□□□□□ -1.64
CDH13-213ENST00000569454 MRGPRGQ86SM5 289 aa4.82□□□□□ -1.64
CDH13-213ENST00000569454 KRTAP1-3Q8IUG1 177 aa4.82□□□□□ -1.64
CDH13-213ENST00000569454 TMEM252Q8N6L7 170 aa4.82□□□□□ -1.64
CDH13-213ENST00000569454 OR51H1Q8NH63 302 aa4.82□□□□□ -1.64
CDH13-213ENST00000569454 ZCCHC14Q8WYQ9 949 aaKnown RBP4.82□□□□□ -1.64
CDH13-213ENST00000569454 CIB3Q96Q77 187 aaPredicted RBP4.82□□□□□ -1.64
CDH13-213ENST00000569454 DIRC2Q96SL1 478 aa4.82□□□□□ -1.64
CDH13-213ENST00000569454 HSD17B10Q99714 261 aaKnown RBP4.82□□□□□ -1.64
CDH13-213ENST00000569454 ATP5SQ99766 215 aa4.82□□□□□ -1.64
CDH13-213ENST00000569454 C1QTNF6Q9BXI9 259 aa4.82□□□□□ -1.64
CDH13-213ENST00000569454 PARD6GQ9BYG4 376 aaPredicted RBP4.82□□□□□ -1.64
CDH13-213ENST00000569454 OPN3Q9H1Y3 402 aaPredicted RBP4.82□□□□□ -1.64
CDH13-213ENST00000569454 TREM1Q9NP99 234 aa4.82□□□□□ -1.64
CDH13-213ENST00000569454 ELOVL5Q9NYP7 299 aa4.82□□□□□ -1.64
CDH13-213ENST00000569454 OR1A1Q9P1Q5 309 aa4.82□□□□□ -1.64
CDH13-213ENST00000569454 OR14J1Q9UGF5 321 aa4.82□□□□□ -1.64
CDH13-213ENST00000569454 JPT1Q9UK76 154 aa4.82□□□□□ -1.64
CDH13-213ENST00000569454 PTPRBP23467 1997 aa4.82□□□□□ -1.64
CDH13-213ENST00000569454 MED12LQ86YW9 2145 aa4.81□□□□□ -1.64
CDH13-213ENST00000569454 IGLV3-9A0A075B6K5 115 aa4.81□□□□□ -1.64
CDH13-213ENST00000569454 C12orf77C9JDV5 145 aa4.81□□□□□ -1.64
CDH13-213ENST00000569454 RNASEK-C17orf49H0YIS7 233 aa4.81□□□□□ -1.64
CDH13-213ENST00000569454 K7N7A8 449 aa4.81□□□□□ -1.64
CDH13-213ENST00000569454 ABCD4O14678 606 aa4.81□□□□□ -1.64
CDH13-213ENST00000569454 ITGB1BP1O14713 200 aa4.81□□□□□ -1.64
CDH13-213ENST00000569454 MGST3O14880 152 aa4.81□□□□□ -1.64
CDH13-213ENST00000569454 RBFOX2O43251 390 aaKnown RBP eCLIP4.81□□□□□ -1.64
CDH13-213ENST00000569454 KCNAB3O43448 404 aa4.81□□□□□ -1.64
CDH13-213ENST00000569454 SYNGR2O43760 224 aa4.81□□□□□ -1.64
CDH13-213ENST00000569454 SOX15O60248 233 aa4.81□□□□□ -1.64
CDH13-213ENST00000569454 AGFG2O95081 481 aa4.81□□□□□ -1.64
CDH13-213ENST00000569454 HBZP02008 142 aa4.81□□□□□ -1.64
CDH13-213ENST00000569454 OPN1MWP04001 364 aa4.81□□□□□ -1.64
CDH13-213ENST00000569454 CD5P06127 495 aa4.81□□□□□ -1.64
CDH13-213ENST00000569454 OR8U8P0C7N1 319 aa4.81□□□□□ -1.64
CDH13-213ENST00000569454 OR8U9P0C7N5 309 aa4.81□□□□□ -1.64
CDH13-213ENST00000569454 OPN1MW2P0DN77 364 aa4.81□□□□□ -1.64
CDH13-213ENST00000569454 OPN1MW3P0DN78 364 aa4.81□□□□□ -1.64
CDH13-213ENST00000569454 GLI4P10075 376 aa4.81□□□□□ -1.64
CDH13-213ENST00000569454 PSG2P11465 335 aa4.81□□□□□ -1.64
CDH13-213ENST00000569454 TMEM11P17152 192 aa4.81□□□□□ -1.64
CDH13-213ENST00000569454 PAX6P26367 422 aa4.81□□□□□ -1.64
CDH13-213ENST00000569454 CEACAM6P40199 344 aa4.81□□□□□ -1.64
CDH13-213ENST00000569454 KIR2DS2P43631 304 aa4.81□□□□□ -1.64
CDH13-213ENST00000569454 OR3A1P47881 315 aa4.81□□□□□ -1.64
CDH13-213ENST00000569454 FABP6P51161 128 aa4.81□□□□□ -1.64
CDH13-213ENST00000569454 NKX6-1P78426 367 aaPredicted RBP4.81□□□□□ -1.64
CDH13-213ENST00000569454 TLE4Q04727 773 aa4.81□□□□□ -1.64
CDH13-213ENST00000569454 ZNF616Q08AN1 781 aa4.81□□□□□ -1.64
CDH13-213ENST00000569454 BTN1A1Q13410 526 aa4.81□□□□□ -1.64
CDH13-213ENST00000569454 MST1LQ2TV78 715 aa4.81□□□□□ -1.64
CDH13-213ENST00000569454 CR1LQ2VPA4 569 aa4.81□□□□□ -1.64
CDH13-213ENST00000569454 ALKBH6Q3KRA9 238 aa4.81□□□□□ -1.64
CDH13-213ENST00000569454 SEM1Q6ZVN7 128 aa4.81□□□□□ -1.64
CDH13-213ENST00000569454 C11orf53Q8IXP5 236 aa4.81□□□□□ -1.64
CDH13-213ENST00000569454 DRAM1Q8N682 238 aa4.81□□□□□ -1.64
CDH13-213ENST00000569454 GCSAMQ8N6F7 178 aa4.81□□□□□ -1.64
CDH13-213ENST00000569454 RBMXL3Q8N7X1 1067 aaKnown RBP4.81□□□□□ -1.64
CDH13-213ENST00000569454 NUP37Q8NFH4 326 aa4.81□□□□□ -1.64
CDH13-213ENST00000569454 OR5C1Q8NGR4 320 aa4.81□□□□□ -1.64
CDH13-213ENST00000569454 OR8U1Q8NH10 309 aa4.81□□□□□ -1.64
CDH13-213ENST00000569454 LRRC29Q8WV35 223 aa4.81□□□□□ -1.64
CDH13-213ENST00000569454 RBMXL1Q96E39 390 aaKnown RBP4.81□□□□□ -1.64
CDH13-213ENST00000569454 SNX22Q96L94 193 aa4.81□□□□□ -1.64
CDH13-213ENST00000569454 PSMG3Q9BT73 122 aaPredicted RBP4.81□□□□□ -1.64
CDH13-213ENST00000569454 SMIM3Q9BZL3 60 aa4.81□□□□□ -1.64
CDH13-213ENST00000569454 HRH4Q9H3N8 390 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms