RNA–Protein interactions for RNA: ENST00000569144.5

CDH13-212, Transcript of cadherin 13, humanhuman

TSL 4

Gene CDH13, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-212ENST00000569144 LYG2Q86SG7 212 aa4.4□□□□□ -1.71
CDH13-212ENST00000569144 ZNF575Q86XF7 245 aa4.4□□□□□ -1.71
CDH13-212ENST00000569144 SPARTQ8N0X7 666 aa4.4□□□□□ -1.71
CDH13-212ENST00000569144 CCDC54Q8NEL0 328 aa4.4□□□□□ -1.71
CDH13-212ENST00000569144 OR52M1Q8NGK5 317 aa4.4□□□□□ -1.71
CDH13-212ENST00000569144 MRGPRDQ8TDS7 321 aa4.4□□□□□ -1.71
CDH13-212ENST00000569144 NTN5Q8WTR8 489 aaPredicted RBP4.4□□□□□ -1.71
CDH13-212ENST00000569144 PHLDA1Q8WV24 401 aaPredicted RBP4.4□□□□□ -1.71
CDH13-212ENST00000569144 C10orf35Q96D05 121 aa4.4□□□□□ -1.71
CDH13-212ENST00000569144 CNN2Q99439 309 aaKnown RBP4.4□□□□□ -1.71
CDH13-212ENST00000569144 ANKRD60Q9BZ19 345 aa4.4□□□□□ -1.71
CDH13-212ENST00000569144 PRRG3Q9BZD7 231 aa4.4□□□□□ -1.71
CDH13-212ENST00000569144 BARHL1Q9BZE3 327 aa4.4□□□□□ -1.71
CDH13-212ENST00000569144 WFDC10AQ9H1F0 79 aa4.4□□□□□ -1.71
CDH13-212ENST00000569144 SLA2Q9H6Q3 261 aa4.4□□□□□ -1.71
CDH13-212ENST00000569144 RHOFQ9HBH0 211 aa4.4□□□□□ -1.71
CDH13-212ENST00000569144 ADGRL4Q9HBW9 690 aa4.4□□□□□ -1.71
CDH13-212ENST00000569144 ENOPH1Q9UHY7 261 aa4.4□□□□□ -1.71
CDH13-212ENST00000569144 SNX5Q9Y5X3 404 aa4.4□□□□□ -1.71
CDH13-212ENST00000569144 TMEM14AQ9Y6G1 99 aa4.4□□□□□ -1.71
CDH13-212ENST00000569144 MUC4Q99102 2169 aa4.39□□□□□ -1.71
CDH13-212ENST00000569144 IGKV1-12A0A0C4DH73 117 aa4.39□□□□□ -1.71
CDH13-212ENST00000569144 LOC102723971A0A1B0GUV8 181 aa4.39□□□□□ -1.71
CDH13-212ENST00000569144 NBR2O15453 112 aa4.39□□□□□ -1.71
CDH13-212ENST00000569144 SYT7O43581 403 aa4.39□□□□□ -1.71
CDH13-212ENST00000569144 IGKV1D-12P01611 117 aa4.39□□□□□ -1.71
CDH13-212ENST00000569144 CSTBP04080 98 aaKnown RBP4.39□□□□□ -1.71
CDH13-212ENST00000569144 TFAP2AP05549 437 aa4.39□□□□□ -1.71
CDH13-212ENST00000569144 MRPL3P09001 348 aaKnown RBP4.39□□□□□ -1.71
CDH13-212ENST00000569144 CD40LGP29965 261 aa4.39□□□□□ -1.71
CDH13-212ENST00000569144 KCNJ3P48549 501 aa4.39□□□□□ -1.71
CDH13-212ENST00000569144 MTCP1P56278 107 aa4.39□□□□□ -1.71
CDH13-212ENST00000569144 SYNJ2BPP57105 145 aa4.39□□□□□ -1.71
CDH13-212ENST00000569144 TCTAP57738 103 aa4.39□□□□□ -1.71
CDH13-212ENST00000569144 ACTBP60709 375 aa4.39□□□□□ -1.71
CDH13-212ENST00000569144 TMEM267Q0VDI3 215 aaPredicted RBP4.39□□□□□ -1.71
CDH13-212ENST00000569144 CDK5R1Q15078 307 aa4.39□□□□□ -1.71
CDH13-212ENST00000569144 LRRC36Q1X8D7 754 aa4.39□□□□□ -1.71
CDH13-212ENST00000569144 C5orf64Q2M2E5 130 aa4.39□□□□□ -1.71
CDH13-212ENST00000569144 Q3ZCU0 254 aa4.39□□□□□ -1.71
CDH13-212ENST00000569144 RSBN1Q5VWQ0 802 aaPredicted RBP4.39□□□□□ -1.71
CDH13-212ENST00000569144 ZNF660Q6AZW8 331 aaPredicted RBP4.39□□□□□ -1.71
CDH13-212ENST00000569144 LIN54Q6MZP7 749 aa4.39□□□□□ -1.71
CDH13-212ENST00000569144 CD200R1LQ6Q8B3 271 aa4.39□□□□□ -1.71
CDH13-212ENST00000569144 SLC25A48Q6ZT89 311 aaKnown RBP4.39□□□□□ -1.71
CDH13-212ENST00000569144 KCTD20Q7Z5Y7 419 aa4.39□□□□□ -1.71
CDH13-212ENST00000569144 GID4Q8IVV7 300 aa4.39□□□□□ -1.71
CDH13-212ENST00000569144 SLC35F2Q8IXU6 374 aa4.39□□□□□ -1.71
CDH13-212ENST00000569144 CBR4Q8N4T8 237 aa4.39□□□□□ -1.71
CDH13-212ENST00000569144 TMEM217Q8N7C4 229 aa4.39□□□□□ -1.71
CDH13-212ENST00000569144 OR8J1Q8NGP2 316 aa4.39□□□□□ -1.71
CDH13-212ENST00000569144 PP6455Q8WZ26 134 aa4.39□□□□□ -1.71
CDH13-212ENST00000569144 IL4I1Q96RQ9 567 aa4.39□□□□□ -1.71
CDH13-212ENST00000569144 ZNF251Q9BRH9 671 aa4.39□□□□□ -1.71
CDH13-212ENST00000569144 GGTLC1Q9BX51 225 aa4.39□□□□□ -1.71
CDH13-212ENST00000569144 TTTY10Q9BZA0 68 aa4.39□□□□□ -1.71
CDH13-212ENST00000569144 RIBC2Q9H4K1 309 aa4.39□□□□□ -1.71
CDH13-212ENST00000569144 S100A14Q9HCY8 104 aa4.39□□□□□ -1.71
CDH13-212ENST00000569144 FAM118AQ9NWS6 357 aa4.39□□□□□ -1.71
CDH13-212ENST00000569144 CNOT2Q9NZN8 540 aaKnown RBP4.39□□□□□ -1.71
CDH13-212ENST00000569144 RNF150Q9ULK6 438 aa4.39□□□□□ -1.71
CDH13-212ENST00000569144 TP53TG1Q9Y2A0 90 aa4.39□□□□□ -1.71
CDH13-212ENST00000569144 NUBP2Q9Y5Y2 271 aa4.39□□□□□ -1.71
CDH13-212ENST00000569144 TNCP24821 2201 aa4.39□□□□□ -1.71
CDH13-212ENST00000569144 PKD1P98161 4303 aa4.39□□□□□ -1.71
CDH13-212ENST00000569144 LOC102724200A0A096LPH7 203 aaPredicted RBP4.38□□□□□ -1.71
CDH13-212ENST00000569144 TRAV24A0A0B4J272 114 aa4.38□□□□□ -1.71
CDH13-212ENST00000569144 IGKV1-9A0A0C4DH69 117 aa4.38□□□□□ -1.71
CDH13-212ENST00000569144 MSGN1A6NI15 193 aa4.38□□□□□ -1.71
CDH13-212ENST00000569144 ZNF670-ZNF695F2Z2N8 137 aa4.38□□□□□ -1.71
CDH13-212ENST00000569144 H0YJX3 145 aa4.38□□□□□ -1.71
CDH13-212ENST00000569144 RAB27BO00194 218 aa4.38□□□□□ -1.71
CDH13-212ENST00000569144 SDCBPO00560 298 aaPredicted RBP4.38□□□□□ -1.71
CDH13-212ENST00000569144 HSPB6O14558 160 aa4.38□□□□□ -1.71
CDH13-212ENST00000569144 MAGEB3O15480 346 aa4.38□□□□□ -1.71
CDH13-212ENST00000569144 MAGEB4O15481 346 aaPredicted RBP4.38□□□□□ -1.71
CDH13-212ENST00000569144 RGS10O43665 173 aa4.38□□□□□ -1.71
CDH13-212ENST00000569144 LANCL1O43813 399 aa4.38□□□□□ -1.71
CDH13-212ENST00000569144 NDUFA3O95167 84 aa4.38□□□□□ -1.71
CDH13-212ENST00000569144 TRGV3P03979 118 aa4.38□□□□□ -1.71
CDH13-212ENST00000569144 PRKACBP22694 351 aa4.38□□□□□ -1.71
CDH13-212ENST00000569144 BMI1P35226 326 aa4.38□□□□□ -1.71
CDH13-212ENST00000569144 ALDH3A2P51648 485 aa4.38□□□□□ -1.71
CDH13-212ENST00000569144 CXCR4P61073 352 aa4.38□□□□□ -1.71
CDH13-212ENST00000569144 SNRPGP62308 76 aaKnown RBP4.38□□□□□ -1.71
CDH13-212ENST00000569144 ZNF45Q02386 682 aa4.38□□□□□ -1.71
CDH13-212ENST00000569144 TATDN3Q17R31 274 aa4.38□□□□□ -1.71
CDH13-212ENST00000569144 AKIRIN2Q53H80 203 aa4.38□□□□□ -1.71
CDH13-212ENST00000569144 ACTBL2Q562R1 376 aa4.38□□□□□ -1.71
CDH13-212ENST00000569144 PAN3Q58A45 887 aaKnown RBP4.38□□□□□ -1.71
CDH13-212ENST00000569144 ZNF322Q6U7Q0 402 aaPredicted RBP4.38□□□□□ -1.71
CDH13-212ENST00000569144 PLEKHG7Q6ZR37 379 aa4.38□□□□□ -1.71
CDH13-212ENST00000569144 SSX6Q7RTT6 188 aa4.38□□□□□ -1.71
CDH13-212ENST00000569144 C10orf67Q8IYJ2 551 aa4.38□□□□□ -1.71
CDH13-212ENST00000569144 SAXO1Q8IYX7 474 aa4.38□□□□□ -1.71
CDH13-212ENST00000569144 NPBQ8NG41 125 aa4.38□□□□□ -1.71
CDH13-212ENST00000569144 PLPPR1Q8TBJ4 325 aa4.38□□□□□ -1.71
CDH13-212ENST00000569144 TSEN15Q8WW01 171 aaKnown RBP4.38□□□□□ -1.71
CDH13-212ENST00000569144 SPSB1Q96BD6 273 aa4.38□□□□□ -1.71
CDH13-212ENST00000569144 MS4A10Q96PG2 267 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms