RNA–Protein interactions for RNA: ENST00000567320.1

CDH1-211, Transcript of cadherin 1, humanhuman

TSL 3

Gene CDH1, Length 352 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-211ENST00000567320 COL1A1P02452 1464 aaPredicted RBP-0.09□□□□□ -2.42
CDH1-211ENST00000567320 SETD5Q9C0A6 1442 aa-0.09□□□□□ -2.42
CDH1-211ENST00000567320 TRAPPC2LH3BP13 241 aa-0.09□□□□□ -2.42
CDH1-211ENST00000567320 H3BSA7 217 aa-0.09□□□□□ -2.42
CDH1-211ENST00000567320 C19orf84I3L1E1 186 aa-0.09□□□□□ -2.42
CDH1-211ENST00000567320 BRI3O95415 125 aa-0.09□□□□□ -2.42
CDH1-211ENST00000567320 CRYBA1P05813 215 aa-0.09□□□□□ -2.42
CDH1-211ENST00000567320 CCNOP22674 350 aa-0.09□□□□□ -2.42
CDH1-211ENST00000567320 NPPCP23582 126 aa-0.09□□□□□ -2.42
CDH1-211ENST00000567320 RANBP1P43487 201 aa-0.09□□□□□ -2.42
CDH1-211ENST00000567320 DNASE1L1P49184 302 aa-0.09□□□□□ -2.42
CDH1-211ENST00000567320 DAPP51397 102 aa-0.09□□□□□ -2.42
CDH1-211ENST00000567320 AQP4P55087 323 aa-0.09□□□□□ -2.42
CDH1-211ENST00000567320 ATP5J2P56134 94 aa-0.09□□□□□ -2.42
CDH1-211ENST00000567320 LINC00313P59037 77 aa-0.09□□□□□ -2.42
CDH1-211ENST00000567320 DSTNP60981 165 aa-0.09□□□□□ -2.42
CDH1-211ENST00000567320 GBE1Q04446 702 aa-0.09□□□□□ -2.42
CDH1-211ENST00000567320 MGAT3Q09327 533 aa-0.09□□□□□ -2.42
CDH1-211ENST00000567320 CIRBPQ14011 172 aaKnown RBP-0.09□□□□□ -2.42
CDH1-211ENST00000567320 TRAM1Q15629 374 aa-0.09□□□□□ -2.42
CDH1-211ENST00000567320 TRIP13Q15645 432 aaPredicted RBP-0.09□□□□□ -2.42
CDH1-211ENST00000567320 Q1T7F1 81 aa-0.09□□□□□ -2.42
CDH1-211ENST00000567320 FAM162BQ5T6X4 162 aa-0.09□□□□□ -2.42
CDH1-211ENST00000567320 FAM183BPQ6ZVS7 135 aa-0.09□□□□□ -2.42
CDH1-211ENST00000567320 KTN1-AS1Q86SY8 53 aa-0.09□□□□□ -2.42
CDH1-211ENST00000567320 SBSPONQ8IVN8 264 aa-0.09□□□□□ -2.42
CDH1-211ENST00000567320 PACRGLQ8N7B6 248 aa-0.09□□□□□ -2.42
CDH1-211ENST00000567320 C9orf163Q8N9P6 203 aa-0.09□□□□□ -2.42
CDH1-211ENST00000567320 DTD1Q8TEA8 209 aa-0.09□□□□□ -2.42
CDH1-211ENST00000567320 TAMM41Q96BW9 452 aa-0.09□□□□□ -2.42
CDH1-211ENST00000567320 OBSCN-AS1Q96MR7 158 aa-0.09□□□□□ -2.42
CDH1-211ENST00000567320 DOHHQ9BU89 302 aa-0.09□□□□□ -2.42
CDH1-211ENST00000567320 MAP1LC3CQ9BXW4 147 aa-0.09□□□□□ -2.42
CDH1-211ENST00000567320 REG4Q9BYZ8 158 aa-0.09□□□□□ -2.42
CDH1-211ENST00000567320 TTTY13Q9BZ97 58 aa-0.09□□□□□ -2.42
CDH1-211ENST00000567320 RGCCQ9H4X1 137 aa-0.09□□□□□ -2.42
CDH1-211ENST00000567320 C10orf95Q9H7T3 257 aa-0.09□□□□□ -2.42
CDH1-211ENST00000567320 DNAJC12Q9UKB3 198 aa-0.09□□□□□ -2.42
CDH1-211ENST00000567320 THSD7AQ9UPZ6 1657 aa-0.09□□□□□ -2.42
CDH1-211ENST00000567320 FLT4P35916 1363 aa-0.09□□□□□ -2.42
CDH1-211ENST00000567320 CACNA1BQ00975 2339 aa-0.09□□□□□ -2.42
CDH1-211ENST00000567320 FSIP2Q5CZC0 6907 aa-0.09□□□□□ -2.42
CDH1-211ENST00000567320 NUP153P49790 1475 aaKnown RBP-0.1□□□□□ -2.42
CDH1-211ENST00000567320 GRIN2BQ13224 1484 aa-0.1□□□□□ -2.42
CDH1-211ENST00000567320 PEAK1Q9H792 1746 aa-0.1□□□□□ -2.42
CDH1-211ENST00000567320 SCN9AQ15858 1988 aa-0.1□□□□□ -2.42
CDH1-211ENST00000567320 PCDH15Q96QU1 1955 aa-0.1□□□□□ -2.42
CDH1-211ENST00000567320 KIF27Q86VH2 1401 aa-0.1□□□□□ -2.43
CDH1-211ENST00000567320 E7EWF7 191 aa-0.1□□□□□ -2.43
CDH1-211ENST00000567320 UBE2L6O14933 153 aa-0.1□□□□□ -2.43
CDH1-211ENST00000567320 UBDO15205 165 aa-0.1□□□□□ -2.43
CDH1-211ENST00000567320 POLR3GO15318 223 aaPredicted RBP-0.1□□□□□ -2.43
CDH1-211ENST00000567320 SHOX2O60902 331 aaPredicted RBP-0.1□□□□□ -2.43
CDH1-211ENST00000567320 ZMPSTE24O75844 475 aa-0.1□□□□□ -2.43
CDH1-211ENST00000567320 SC5DO75845 299 aa-0.1□□□□□ -2.43
CDH1-211ENST00000567320 RNASE3P12724 160 aaKnown RBP-0.1□□□□□ -2.43
CDH1-211ENST00000567320 AKR1C4P17516 323 aa-0.1□□□□□ -2.43
CDH1-211ENST00000567320 SRMP19623 302 aa-0.1□□□□□ -2.43
CDH1-211ENST00000567320 RPL27AP46776 148 aaKnown RBP-0.1□□□□□ -2.43
CDH1-211ENST00000567320 OR10A3P58181 314 aa-0.1□□□□□ -2.43
CDH1-211ENST00000567320 XIAPP98170 497 aa-0.1□□□□□ -2.43
CDH1-211ENST00000567320 GTF2BQ00403 316 aa-0.1□□□□□ -2.43
CDH1-211ENST00000567320 SRSF6Q13247 344 aaKnown RBP-0.1□□□□□ -2.43
CDH1-211ENST00000567320 TRMT12Q53H54 448 aaKnown RBP-0.1□□□□□ -2.43
CDH1-211ENST00000567320 FAM173BQ6P4H8 233 aa-0.1□□□□□ -2.43
CDH1-211ENST00000567320 XKRXQ6PP77 449 aa-0.1□□□□□ -2.43
CDH1-211ENST00000567320 Q6ZT83 130 aa-0.1□□□□□ -2.43
CDH1-211ENST00000567320 LCA10Q71F78 164 aa-0.1□□□□□ -2.43
CDH1-211ENST00000567320 MTERF4Q7Z6M4 381 aaKnown RBP-0.1□□□□□ -2.43
CDH1-211ENST00000567320 Q8N6K4 173 aa-0.1□□□□□ -2.43
CDH1-211ENST00000567320 TMEM75Q8N9X5 138 aa-0.1□□□□□ -2.43
CDH1-211ENST00000567320 ZNF439Q8NDP4 499 aa-0.1□□□□□ -2.43
CDH1-211ENST00000567320 MBD3L1Q8WWY6 194 aa-0.1□□□□□ -2.43
CDH1-211ENST00000567320 OR5P2Q8WZ92 322 aa-0.1□□□□□ -2.43
CDH1-211ENST00000567320 OR51E2Q9H255 320 aa-0.1□□□□□ -2.43
CDH1-211ENST00000567320 FBXO44Q9H4M3 255 aa-0.1□□□□□ -2.43
CDH1-211ENST00000567320 CLEC2DQ9UHP7 191 aa-0.1□□□□□ -2.43
CDH1-211ENST00000567320 RBM7Q9Y580 266 aaKnown RBP-0.1□□□□□ -2.43
CDH1-211ENST00000567320 SNURFQ9Y675 71 aa-0.1□□□□□ -2.43
CDH1-211ENST00000567320 KCPQ6ZWJ8 1503 aa-0.1□□□□□ -2.43
CDH1-211ENST00000567320 HECW1Q76N89 1606 aa-0.1□□□□□ -2.43
CDH1-211ENST00000567320 RTTNQ86VV8 2226 aa-0.1□□□□□ -2.43
CDH1-211ENST00000567320 MCM3APO60318 1980 aa-0.1□□□□□ -2.43
CDH1-211ENST00000567320 MYH11P35749 1972 aa-0.1□□□□□ -2.43
CDH1-211ENST00000567320 SCAF11Q99590 1463 aaKnown RBP-0.1□□□□□ -2.43
CDH1-211ENST00000567320 SIPA1L1O43166 1804 aa-0.1□□□□□ -2.43
CDH1-211ENST00000567320 ABCB11O95342 1321 aa-0.11□□□□□ -2.43
CDH1-211ENST00000567320 TTC41PQ6P2S7 1318 aa-0.11□□□□□ -2.43
CDH1-211ENST00000567320 GPR98Q8WXG9 6306 aa-0.11□□□□□ -2.43
CDH1-211ENST00000567320 NUMA1Q14980 2115 aa-0.11□□□□□ -2.43
CDH1-211ENST00000567320 RALGAPA2Q2PPJ7 1873 aa-0.11□□□□□ -2.43
CDH1-211ENST00000567320 ZNF106Q9H2Y7 1883 aaKnown RBP-0.11□□□□□ -2.43
CDH1-211ENST00000567320 A0A0D9SEW6 157 aa-0.11□□□□□ -2.43
CDH1-211ENST00000567320 A0A0D9SG42 100 aa-0.11□□□□□ -2.43
CDH1-211ENST00000567320 A0A1B0GTQ1 180 aa-0.11□□□□□ -2.43
CDH1-211ENST00000567320 MGAT4DA6NG13 374 aa-0.11□□□□□ -2.43
CDH1-211ENST00000567320 TRIM64CA6NLI5 447 aa-0.11□□□□□ -2.43
CDH1-211ENST00000567320 HMSDA8MTL9 139 aa-0.11□□□□□ -2.43
CDH1-211ENST00000567320 BHLHE40O14503 412 aa-0.11□□□□□ -2.43
CDH1-211ENST00000567320 TXNDC9O14530 226 aa-0.11□□□□□ -2.43
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms