RNA–Protein interactions for RNA: ENST00000563952.1

CMTM4-204, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene CMTM4, Length 1,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-204ENST00000563952 LINC01548A6NM66 108 aa24.3■■□□□ 1.48
CMTM4-204ENST00000563952 GPR12P47775 334 aa24.3■■□□□ 1.48
CMTM4-204ENST00000563952 ATG5Q9H1Y0 275 aa24.3■■□□□ 1.48
CMTM4-204ENST00000563952 ABCG5Q9H222 651 aa24.3■■□□□ 1.48
CMTM4-204ENST00000563952 PIPOXQ9P0Z9 390 aa24.3■■□□□ 1.48
CMTM4-204ENST00000563952 LOC100506127A0A0U1RQW1 187 aa24.29■■□□□ 1.48
CMTM4-204ENST00000563952 TRDCB7Z8K6 153 aa24.29■■□□□ 1.48
CMTM4-204ENST00000563952 RAB27BO00194 218 aa24.29■■□□□ 1.48
CMTM4-204ENST00000563952 RAB29O14966 203 aa24.29■■□□□ 1.48
CMTM4-204ENST00000563952 RPL39P5Q59GN2 51 aa24.29■■□□□ 1.48
CMTM4-204ENST00000563952 PTX4Q96A99 478 aa24.29■■□□□ 1.48
CMTM4-204ENST00000563952 ABHD14BQ96IU4 210 aa24.29■■□□□ 1.48
CMTM4-204ENST00000563952 KCTD7Q96MP8 289 aa24.29■■□□□ 1.48
CMTM4-204ENST00000563952 DAPK2Q9UIK4 370 aa24.29■■□□□ 1.48
CMTM4-204ENST00000563952 MFNGO00587 321 aa24.28■■□□□ 1.48
CMTM4-204ENST00000563952 HIST1H1DP16402 221 aaKnown RBP24.28■■□□□ 1.48
CMTM4-204ENST00000563952 CD36P16671 472 aa24.28■■□□□ 1.48
CMTM4-204ENST00000563952 MMDQ15546 238 aa24.28■■□□□ 1.48
CMTM4-204ENST00000563952 EDARADDQ8WWZ3 215 aa24.28■■□□□ 1.48
CMTM4-204ENST00000563952 C11orf54Q9H0W9 315 aaPredicted RBP24.28■■□□□ 1.48
CMTM4-204ENST00000563952 RNF167Q9H6Y7 350 aa24.28■■□□□ 1.48
CMTM4-204ENST00000563952 IGKV1-6A0A0C4DH72 117 aa24.27■■□□□ 1.48
CMTM4-204ENST00000563952 FCGR3AP08637 254 aa24.27■■□□□ 1.48
CMTM4-204ENST00000563952 PF4V1P10720 104 aa24.27■■□□□ 1.48
CMTM4-204ENST00000563952 SDC2P34741 201 aa24.27■■□□□ 1.48
CMTM4-204ENST00000563952 MXD1Q05195 221 aa24.27■■□□□ 1.48
CMTM4-204ENST00000563952 FAM71F2Q6NXP2 309 aa24.27■■□□□ 1.48
CMTM4-204ENST00000563952 STPG2Q8N412 459 aa24.27■■□□□ 1.48
CMTM4-204ENST00000563952 FAM71E2Q8N5Q1 922 aa24.27■■□□□ 1.48
CMTM4-204ENST00000563952 ITGB1BP1O14713 200 aa24.26■■□□□ 1.47
CMTM4-204ENST00000563952 ACTBP60709 375 aa24.26■■□□□ 1.47
CMTM4-204ENST00000563952 SLC35B1P78383 322 aa24.26■■□□□ 1.47
CMTM4-204ENST00000563952 SFXN4Q6P4A7 337 aa24.26■■□□□ 1.47
CMTM4-204ENST00000563952 MAFIPQ8WZ33 124 aa24.26■■□□□ 1.47
CMTM4-204ENST00000563952 RITA1Q96K30 269 aa24.26■■□□□ 1.47
CMTM4-204ENST00000563952 ZNF251Q9BRH9 671 aa24.26■■□□□ 1.47
CMTM4-204ENST00000563952 RNF150Q9ULK6 438 aa24.26■■□□□ 1.47
CMTM4-204ENST00000563952 AP4M1O00189 453 aa24.25■■□□□ 1.47
CMTM4-204ENST00000563952 FABP7O15540 132 aa24.25■■□□□ 1.47
CMTM4-204ENST00000563952 CLEC2LP0C7M8 214 aa24.25■■□□□ 1.47
CMTM4-204ENST00000563952 SNRPBP14678 240 aaKnown RBP24.25■■□□□ 1.47
CMTM4-204ENST00000563952 SOX6P35712 828 aa24.25■■□□□ 1.47
CMTM4-204ENST00000563952 ARFRP1Q13795 201 aa24.25■■□□□ 1.47
CMTM4-204ENST00000563952 OR4A4PQ8NGN8 299 aa24.25■■□□□ 1.47
CMTM4-204ENST00000563952 HSPB9Q9BQS6 159 aa24.25■■□□□ 1.47
CMTM4-204ENST00000563952 AGMATQ9BSE5 352 aa24.25■■□□□ 1.47
CMTM4-204ENST00000563952 ZNF230Q9UIE0 474 aaPredicted RBP24.25■■□□□ 1.47
CMTM4-204ENST00000563952 PLXNB1O43157 2135 aa24.25■■□□□ 1.47
CMTM4-204ENST00000563952 G3V4G9 280 aa24.24■■□□□ 1.47
CMTM4-204ENST00000563952 CNTFRP26992 372 aa24.24■■□□□ 1.47
CMTM4-204ENST00000563952 TALDO1P37837 337 aa24.24■■□□□ 1.47
CMTM4-204ENST00000563952 KIR2DS1Q14954 304 aa24.24■■□□□ 1.47
CMTM4-204ENST00000563952 FAM131AQ6UXB0 335 aa24.24■■□□□ 1.47
CMTM4-204ENST00000563952 GLDNQ6ZMI3 551 aaPredicted RBP24.24■■□□□ 1.47
CMTM4-204ENST00000563952 RDH8Q9NYR8 311 aa24.24■■□□□ 1.47
CMTM4-204ENST00000563952 NOTCH1P46531 2555 aa24.24■■□□□ 1.47
CMTM4-204ENST00000563952 BET1O15155 118 aa24.23■■□□□ 1.47
CMTM4-204ENST00000563952 CT45A6P0DMU7 189 aa24.23■■□□□ 1.47
CMTM4-204ENST00000563952 CT45A5P0DMU8 189 aa24.23■■□□□ 1.47
CMTM4-204ENST00000563952 CT45A7P0DMV0 189 aa24.23■■□□□ 1.47
CMTM4-204ENST00000563952 LGALS14Q8TCE9 139 aa24.23■■□□□ 1.47
CMTM4-204ENST00000563952 PHF21AQ96BD5 680 aa24.23■■□□□ 1.47
CMTM4-204ENST00000563952 CENPOQ9BU64 300 aa24.23■■□□□ 1.47
CMTM4-204ENST00000563952 GHITMQ9H3K2 345 aa24.23■■□□□ 1.47
CMTM4-204ENST00000563952 GSTT2P0CG29 244 aa24.22■■□□□ 1.47
CMTM4-204ENST00000563952 GSTT2BP0CG30 244 aa24.22■■□□□ 1.47
CMTM4-204ENST00000563952 IGSF11Q5DX21 431 aa24.22■■□□□ 1.47
CMTM4-204ENST00000563952 TSPAN14Q8NG11 270 aa24.22■■□□□ 1.47
CMTM4-204ENST00000563952 ZNF107Q9UII5 783 aaPredicted RBP24.22■■□□□ 1.47
CMTM4-204ENST00000563952 ZNF221Q9UK13 617 aa24.22■■□□□ 1.47
CMTM4-204ENST00000563952 ELF5Q9UKW6 265 aaPredicted RBP24.22■■□□□ 1.47
CMTM4-204ENST00000563952 NBR2O15453 112 aa24.21■■□□□ 1.47
CMTM4-204ENST00000563952 PF4P02776 101 aa24.21■■□□□ 1.47
CMTM4-204ENST00000563952 SERPINB10P48595 397 aa24.21■■□□□ 1.47
CMTM4-204ENST00000563952 CDNFQ49AH0 187 aa24.21■■□□□ 1.47
CMTM4-204ENST00000563952 A0A087WXM4 84 aa24.2■■□□□ 1.46
CMTM4-204ENST00000563952 RRP9O43818 475 aaKnown RBP24.2■■□□□ 1.46
CMTM4-204ENST00000563952 TNFAIP8O95379 198 aa24.2■■□□□ 1.46
CMTM4-204ENST00000563952 ARL6IP1Q15041 203 aa24.2■■□□□ 1.46
CMTM4-204ENST00000563952 OR10J5Q8NHC4 309 aa24.2■■□□□ 1.46
CMTM4-204ENST00000563952 GON7Q9BXV9 100 aa24.2■■□□□ 1.46
CMTM4-204ENST00000563952 VCX3AQ9NNX9 186 aa24.2■■□□□ 1.46
CMTM4-204ENST00000563952 OR5H14A6NHG9 310 aa24.19■■□□□ 1.46
CMTM4-204ENST00000563952 H7C2Y5 167 aa24.19■■□□□ 1.46
CMTM4-204ENST00000563952 RPL23AP62750 156 aaKnown RBP24.19■■□□□ 1.46
CMTM4-204ENST00000563952 IDNKQ5T6J7 187 aa24.19■■□□□ 1.46
CMTM4-204ENST00000563952 COMMD1Q8N668 190 aa24.19■■□□□ 1.46
CMTM4-204ENST00000563952 DRAXINQ8NBI3 349 aaPredicted RBP24.19■■□□□ 1.46
CMTM4-204ENST00000563952 CABLES2Q9BTV7 478 aa24.19■■□□□ 1.46
CMTM4-204ENST00000563952 KIAA1456Q9P272 454 aa24.19■■□□□ 1.46
CMTM4-204ENST00000563952 H0YJW9 148 aa24.18■■□□□ 1.46
CMTM4-204ENST00000563952 CD33P20138 364 aa24.18■■□□□ 1.46
CMTM4-204ENST00000563952 PDLIM3Q53GG5 364 aaPredicted RBP24.18■■□□□ 1.46
CMTM4-204ENST00000563952 SAMD5Q5TGI4 173 aa24.18■■□□□ 1.46
CMTM4-204ENST00000563952 WASHC3Q9Y3C0 194 aa24.18■■□□□ 1.46
CMTM4-204ENST00000563952 MC5RP33032 325 aa24.17■■□□□ 1.46
CMTM4-204ENST00000563952 PNLIPRP3Q17RR3 467 aa24.17■■□□□ 1.46
CMTM4-204ENST00000563952 TEX38Q6PEX7 206 aa24.17■■□□□ 1.46
CMTM4-204ENST00000563952 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP24.17■■□□□ 1.46
CMTM4-204ENST00000563952 RHBDL2Q9NX52 303 aa24.17■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms