RNA–Protein interactions for RNA: ENST00000563220.1

COMMD4-208, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 1,897 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-208ENST00000563220 RPL31P62899 125 aaKnown RBP14.9□□□□□ -0.02
COMMD4-208ENST00000563220 IL15RAQ13261 267 aa14.9□□□□□ -0.02
COMMD4-208ENST00000563220 AVPI1Q5T686 147 aa14.9□□□□□ -0.02
COMMD4-208ENST00000563220 PSG11Q9UQ72 335 aa14.9□□□□□ -0.02
COMMD4-208ENST00000563220 LINC00312Q9Y6C7 94 aa14.9□□□□□ -0.02
COMMD4-208ENST00000563220 FXYD6-FXYD2A0A087WZ82 144 aa14.89□□□□□ -0.03
COMMD4-208ENST00000563220 ZNF729A6NN14 1252 aaPredicted RBP14.89□□□□□ -0.03
COMMD4-208ENST00000563220 CDS2O95674 445 aa14.89□□□□□ -0.03
COMMD4-208ENST00000563220 CRYZL1O95825 349 aa14.89□□□□□ -0.03
COMMD4-208ENST00000563220 ZNF134P52741 427 aa14.89□□□□□ -0.03
COMMD4-208ENST00000563220 MRPS11P82912 194 aaKnown RBP14.89□□□□□ -0.03
COMMD4-208ENST00000563220 CYCSP99999 105 aaKnown RBP14.89□□□□□ -0.03
COMMD4-208ENST00000563220 MEF2CQ06413 473 aaPredicted RBP14.89□□□□□ -0.03
COMMD4-208ENST00000563220 TMEM268Q5VZI3 342 aa14.89□□□□□ -0.03
COMMD4-208ENST00000563220 SELENOHQ8IZQ5 122 aaKnown RBP14.89□□□□□ -0.03
COMMD4-208ENST00000563220 ABHD14BQ96IU4 210 aa14.89□□□□□ -0.03
COMMD4-208ENST00000563220 GFOD1Q9NXC2 390 aa14.89□□□□□ -0.03
COMMD4-208ENST00000563220 COMMD9Q9P000 198 aa14.89□□□□□ -0.03
COMMD4-208ENST00000563220 KLF2Q9Y5W3 355 aaPredicted RBP14.89□□□□□ -0.03
COMMD4-208ENST00000563220 DCHS2Q6V1P9 2916 aa14.89□□□□□ -0.03
COMMD4-208ENST00000563220 IFNA21P01568 189 aa14.89□□□□□ -0.03
COMMD4-208ENST00000563220 WNT2P09544 360 aa14.89□□□□□ -0.03
COMMD4-208ENST00000563220 ERVFRD-1P60508 538 aa14.89□□□□□ -0.03
COMMD4-208ENST00000563220 FGL1Q08830 312 aa14.89□□□□□ -0.03
COMMD4-208ENST00000563220 EIF4EBP1Q13541 118 aaPredicted RBP14.89□□□□□ -0.03
COMMD4-208ENST00000563220 IAH1Q2TAA2 248 aaPredicted RBP14.89□□□□□ -0.03
COMMD4-208ENST00000563220 TMEM200BQ69YZ2 307 aa14.89□□□□□ -0.03
COMMD4-208ENST00000563220 FAM219AQ8IW50 185 aa14.89□□□□□ -0.03
COMMD4-208ENST00000563220 SLC35G3Q8N808 338 aa14.89□□□□□ -0.03
COMMD4-208ENST00000563220 C17orf50Q8WW18 174 aa14.89□□□□□ -0.03
COMMD4-208ENST00000563220 H1FXQ92522 213 aaKnown RBP14.89□□□□□ -0.03
COMMD4-208ENST00000563220 LEAP2Q969E1 77 aa14.89□□□□□ -0.03
COMMD4-208ENST00000563220 IDI2-AS1Q9NZ38 188 aa14.89□□□□□ -0.03
COMMD4-208ENST00000563220 GSKIPQ9P0R6 139 aa14.89□□□□□ -0.03
COMMD4-208ENST00000563220 COL12A1Q99715 3063 aa14.88□□□□□ -0.03
COMMD4-208ENST00000563220 ARPC5O15511 151 aa14.88□□□□□ -0.03
COMMD4-208ENST00000563220 NDUFS7O75251 213 aa14.88□□□□□ -0.03
COMMD4-208ENST00000563220 M6PRP20645 277 aa14.88□□□□□ -0.03
COMMD4-208ENST00000563220 PSMB6P28072 239 aa14.88□□□□□ -0.03
COMMD4-208ENST00000563220 AANATQ16613 207 aa14.88□□□□□ -0.03
COMMD4-208ENST00000563220 C11orf87Q6NUJ2 197 aa14.88□□□□□ -0.03
COMMD4-208ENST00000563220 TMEM65Q6PI78 240 aa14.88□□□□□ -0.03
COMMD4-208ENST00000563220 ZBTB34Q8NCN2 500 aa14.88□□□□□ -0.03
COMMD4-208ENST00000563220 EDARADDQ8WWZ3 215 aa14.88□□□□□ -0.03
COMMD4-208ENST00000563220 RAB9BQ9NP90 201 aa14.88□□□□□ -0.03
COMMD4-208ENST00000563220 TAS2R3Q9NYW6 316 aa14.88□□□□□ -0.03
COMMD4-208ENST00000563220 SLC31A2O15432 143 aa14.87□□□□□ -0.03
COMMD4-208ENST00000563220 SLC25A4P12235 298 aa14.87□□□□□ -0.03
COMMD4-208ENST00000563220 CCL3L1P16619 93 aa14.87□□□□□ -0.03
COMMD4-208ENST00000563220 SRPXP78539 464 aa14.87□□□□□ -0.03
COMMD4-208ENST00000563220 ZNF841Q6ZN19 808 aa14.87□□□□□ -0.03
COMMD4-208ENST00000563220 ZNF695Q8IW36 515 aa14.87□□□□□ -0.03
COMMD4-208ENST00000563220 SCARB1Q8WTV0 552 aa14.87□□□□□ -0.03
COMMD4-208ENST00000563220 SDHAF2Q9NX18 166 aa14.87□□□□□ -0.03
COMMD4-208ENST00000563220 MYO18BQ8IUG5 2567 aa14.87□□□□□ -0.03
COMMD4-208ENST00000563220 H0YIZ8 118 aa14.86□□□□□ -0.03
COMMD4-208ENST00000563220 PROP1O75360 226 aa14.86□□□□□ -0.03
COMMD4-208ENST00000563220 RPL30P62888 115 aaKnown RBP14.86□□□□□ -0.03
COMMD4-208ENST00000563220 PRAMEF5Q5TYX0 476 aa14.86□□□□□ -0.03
COMMD4-208ENST00000563220 SPOCK3Q9BQ16 436 aa14.86□□□□□ -0.03
COMMD4-208ENST00000563220 RNF126Q9BV68 326 aa14.86□□□□□ -0.03
COMMD4-208ENST00000563220 DSCAML1Q8TD84 2053 aa14.86□□□□□ -0.03
COMMD4-208ENST00000563220 PPIHO43447 177 aaKnown RBP14.86□□□□□ -0.03
COMMD4-208ENST00000563220 ZNF16P17020 682 aaPredicted RBP14.86□□□□□ -0.03
COMMD4-208ENST00000563220 NFYBP25208 207 aa14.86□□□□□ -0.03
COMMD4-208ENST00000563220 RAB32Q13637 225 aa14.86□□□□□ -0.03
COMMD4-208ENST00000563220 MSMO1Q15800 293 aa14.86□□□□□ -0.03
COMMD4-208ENST00000563220 ZNF585BQ52M93 769 aa14.86□□□□□ -0.03
COMMD4-208ENST00000563220 BTNL3Q6UXE8 466 aa14.86□□□□□ -0.03
COMMD4-208ENST00000563220 ARL6Q9H0F7 186 aa14.86□□□□□ -0.03
COMMD4-208ENST00000563220 NUP50Q9UKX7 468 aa14.86□□□□□ -0.03
COMMD4-208ENST00000563220 TMED3Q9Y3Q3 217 aa14.86□□□□□ -0.03
COMMD4-208ENST00000563220 USF3Q68DE3 2245 aa14.85□□□□□ -0.03
COMMD4-208ENST00000563220 A0A1W2PPE3 182 aa14.85□□□□□ -0.03
COMMD4-208ENST00000563220 I3L521 148 aa14.85□□□□□ -0.03
COMMD4-208ENST00000563220 F12P00748 615 aaPredicted RBP14.85□□□□□ -0.03
COMMD4-208ENST00000563220 LINC00205P59089 165 aa14.85□□□□□ -0.03
COMMD4-208ENST00000563220 CT45A1Q5HYN5 189 aa14.85□□□□□ -0.03
COMMD4-208ENST00000563220 ZNF546Q86UE3 836 aa14.85□□□□□ -0.03
COMMD4-208ENST00000563220 CT45A3Q8NHU0 189 aa14.85□□□□□ -0.03
COMMD4-208ENST00000563220 RBPMSQ93062 196 aaKnown RBP14.85□□□□□ -0.03
COMMD4-208ENST00000563220 ZNF714Q96N38 554 aa14.85□□□□□ -0.03
COMMD4-208ENST00000563220 IFI27L2Q9H2X8 130 aa14.85□□□□□ -0.03
COMMD4-208ENST00000563220 PLEKHF2Q9H8W4 249 aa14.85□□□□□ -0.03
COMMD4-208ENST00000563220 CHODLQ9H9P2 273 aa14.85□□□□□ -0.03
COMMD4-208ENST00000563220 MBD2Q9UBB5 411 aa14.85□□□□□ -0.03
COMMD4-208ENST00000563220 RPUSD1Q9UJJ7 312 aaKnown RBP14.85□□□□□ -0.03
COMMD4-208ENST00000563220 GOSR1O95249 250 aa14.84□□□□□ -0.03
COMMD4-208ENST00000563220 IGKV1-39P01597 117 aa14.84□□□□□ -0.03
COMMD4-208ENST00000563220 IGKV1D-39P04432 117 aa14.84□□□□□ -0.03
COMMD4-208ENST00000563220 SERPINE2P07093 398 aa14.84□□□□□ -0.03
COMMD4-208ENST00000563220 Q3ZCU0 254 aa14.84□□□□□ -0.03
COMMD4-208ENST00000563220 SLC51BQ86UW2 128 aa14.84□□□□□ -0.03
COMMD4-208ENST00000563220 OR52M1Q8NGK5 317 aa14.84□□□□□ -0.03
COMMD4-208ENST00000563220 RAB1CQ92928 201 aa14.84□□□□□ -0.03
COMMD4-208ENST00000563220 IL22RA2Q969J5 263 aa14.84□□□□□ -0.03
COMMD4-208ENST00000563220 MFFQ9GZY8 342 aa14.84□□□□□ -0.03
COMMD4-208ENST00000563220 GAL3ST2Q9H3Q3 398 aa14.84□□□□□ -0.03
COMMD4-208ENST00000563220 A0A0D9SG52 128 aa14.84□□□□□ -0.03
COMMD4-208ENST00000563220 OVOL3O00110 214 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms