RNA–Protein interactions for RNA: ENST00000561348.1

HERC1-212, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 588 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-212ENST00000561348 HERPUD1Q15011 391 aa8.07□□□□□ -1.12
HERC1-212ENST00000561348 ZNF880Q6PDB4 577 aa8.07□□□□□ -1.12
HERC1-212ENST00000561348 GPR141Q7Z602 305 aa8.07□□□□□ -1.12
HERC1-212ENST00000561348 THNSL2Q86YJ6 484 aa8.07□□□□□ -1.12
HERC1-212ENST00000561348 SAMD12Q8N8I0 201 aa8.07□□□□□ -1.12
HERC1-212ENST00000561348 C8orf31Q8N9H6 132 aa8.07□□□□□ -1.12
HERC1-212ENST00000561348 OR8U1Q8NH10 309 aa8.07□□□□□ -1.12
HERC1-212ENST00000561348 EDARADDQ8WWZ3 215 aa8.07□□□□□ -1.12
HERC1-212ENST00000561348 ST6GALNAC6Q969X2 333 aa8.07□□□□□ -1.12
HERC1-212ENST00000561348 PTX4Q96A99 478 aa8.07□□□□□ -1.12
HERC1-212ENST00000561348 RASL11BQ9BPW5 248 aa8.07□□□□□ -1.12
HERC1-212ENST00000561348 MRPS26Q9BYN8 205 aaKnown RBP8.07□□□□□ -1.12
HERC1-212ENST00000561348 NAA50Q9GZZ1 169 aaKnown RBP8.07□□□□□ -1.12
HERC1-212ENST00000561348 C11orf54Q9H0W9 315 aaPredicted RBP8.07□□□□□ -1.12
HERC1-212ENST00000561348 DIABLOQ9NR28 239 aa8.07□□□□□ -1.12
HERC1-212ENST00000561348 SERTAD4Q9NUC0 356 aa8.07□□□□□ -1.12
HERC1-212ENST00000561348 COMMD3Q9UBI1 195 aa8.07□□□□□ -1.12
HERC1-212ENST00000561348 MRPS7Q9Y2R9 242 aaKnown RBP8.07□□□□□ -1.12
HERC1-212ENST00000561348 ETV7Q9Y603 341 aa8.07□□□□□ -1.12
HERC1-212ENST00000561348 TRBV6-6A0A0A6YYG2 114 aa8.06□□□□□ -1.12
HERC1-212ENST00000561348 IGKV1-6A0A0C4DH72 117 aa8.06□□□□□ -1.12
HERC1-212ENST00000561348 MEIS3P1A6NDR6 274 aa8.06□□□□□ -1.12
HERC1-212ENST00000561348 M0QZK8 103 aa8.06□□□□□ -1.12
HERC1-212ENST00000561348 LANCL1O43813 399 aa8.06□□□□□ -1.12
HERC1-212ENST00000561348 SCGNO76038 276 aa8.06□□□□□ -1.12
HERC1-212ENST00000561348 GSTP1P09211 210 aaKnown RBP8.06□□□□□ -1.12
HERC1-212ENST00000561348 CSF1P09603 554 aa8.06□□□□□ -1.12
HERC1-212ENST00000561348 PTHLHP12272 177 aa8.06□□□□□ -1.12
HERC1-212ENST00000561348 ARL6IP1Q15041 203 aa8.06□□□□□ -1.12
HERC1-212ENST00000561348 PLGLAQ15195 96 aa8.06□□□□□ -1.12
HERC1-212ENST00000561348 MMDQ15546 238 aa8.06□□□□□ -1.12
HERC1-212ENST00000561348 Q3ZCU0 254 aa8.06□□□□□ -1.12
HERC1-212ENST00000561348 C11orf88Q6PI97 169 aa8.06□□□□□ -1.12
HERC1-212ENST00000561348 FAM131AQ6UXB0 335 aa8.06□□□□□ -1.12
HERC1-212ENST00000561348 ZNF329Q86UD4 541 aa8.06□□□□□ -1.12
HERC1-212ENST00000561348 CROCCP3Q8IVE0 287 aa8.06□□□□□ -1.12
HERC1-212ENST00000561348 OR5AU1Q8NGC0 362 aa8.06□□□□□ -1.12
HERC1-212ENST00000561348 OR4A4PQ8NGN8 299 aa8.06□□□□□ -1.12
HERC1-212ENST00000561348 S100A16Q96FQ6 103 aaKnown RBP8.06□□□□□ -1.12
HERC1-212ENST00000561348 NOL4LQ96MY1 436 aaPredicted RBP8.06□□□□□ -1.12
HERC1-212ENST00000561348 CITED1Q99966 193 aa8.06□□□□□ -1.12
HERC1-212ENST00000561348 ZNF251Q9BRH9 671 aa8.06□□□□□ -1.12
HERC1-212ENST00000561348 IFI27L2Q9H2X8 130 aa8.06□□□□□ -1.12
HERC1-212ENST00000561348 PIPOXQ9P0Z9 390 aa8.06□□□□□ -1.12
HERC1-212ENST00000561348 TET2Q6N021 2002 aaPredicted RBP8.06□□□□□ -1.12
HERC1-212ENST00000561348 IGKV1D-8A0A087WSZ0 117 aa8.05□□□□□ -1.12
HERC1-212ENST00000561348 FAM90A9PA6NNJ1 464 aa8.05□□□□□ -1.12
HERC1-212ENST00000561348 M0R1X1 148 aa8.05□□□□□ -1.12
HERC1-212ENST00000561348 TSPAN15O95858 294 aa8.05□□□□□ -1.12
HERC1-212ENST00000561348 AMY1AP04745 511 aa8.05□□□□□ -1.12
HERC1-212ENST00000561348 AMY2AP04746 511 aa8.05□□□□□ -1.12
HERC1-212ENST00000561348 CD1BP29016 333 aa8.05□□□□□ -1.12
HERC1-212ENST00000561348 F2RL1P55085 397 aa8.05□□□□□ -1.12
HERC1-212ENST00000561348 ARPC4P59998 168 aa8.05□□□□□ -1.12
HERC1-212ENST00000561348 LSAMPQ13449 338 aa8.05□□□□□ -1.12
HERC1-212ENST00000561348 HACD4Q5VWC8 232 aa8.05□□□□□ -1.12
HERC1-212ENST00000561348 TREML4Q6UXN2 200 aa8.05□□□□□ -1.12
HERC1-212ENST00000561348 SLC35E3Q7Z769 313 aa8.05□□□□□ -1.12
HERC1-212ENST00000561348 ODF3L1Q8IXM7 274 aa8.05□□□□□ -1.12
HERC1-212ENST00000561348 C5orf56Q8N8D9 126 aa8.05□□□□□ -1.12
HERC1-212ENST00000561348 OR13F1Q8NGS4 319 aa8.05□□□□□ -1.12
HERC1-212ENST00000561348 ABHD5Q8WTS1 349 aa8.05□□□□□ -1.12
HERC1-212ENST00000561348 SLC25A38Q96DW6 304 aa8.05□□□□□ -1.12
HERC1-212ENST00000561348 NABP2Q9BQ15 211 aa8.05□□□□□ -1.12
HERC1-212ENST00000561348 OR2D2Q9H210 308 aa8.05□□□□□ -1.12
HERC1-212ENST00000561348 BATF3Q9NR55 127 aa8.05□□□□□ -1.12
HERC1-212ENST00000561348 SPATA2Q9UM82 520 aa8.05□□□□□ -1.12
HERC1-212ENST00000561348 TCRBV4S1A1TA0A5B7 111 aa8.04□□□□□ -1.12
HERC1-212ENST00000561348 FAM25AB3EWG3 89 aa8.04□□□□□ -1.12
HERC1-212ENST00000561348 FAM25CB3EWG5 89 aa8.04□□□□□ -1.12
HERC1-212ENST00000561348 FAM25GB3EWG6 89 aa8.04□□□□□ -1.12
HERC1-212ENST00000561348 NFYAP23511 347 aaPredicted RBP8.04□□□□□ -1.12
HERC1-212ENST00000561348 CNTFRP26992 372 aa8.04□□□□□ -1.12
HERC1-212ENST00000561348 LINC00205P59089 165 aa8.04□□□□□ -1.12
HERC1-212ENST00000561348 ACTBP60709 375 aa8.04□□□□□ -1.12
HERC1-212ENST00000561348 PITPNAQ00169 270 aa8.04□□□□□ -1.12
HERC1-212ENST00000561348 C2orf68Q2NKX9 166 aa8.04□□□□□ -1.12
HERC1-212ENST00000561348 ZNF260Q3ZCT1 412 aa8.04□□□□□ -1.12
HERC1-212ENST00000561348 UBE2NLQ5JXB2 153 aa8.04□□□□□ -1.12
HERC1-212ENST00000561348 TMEM69Q5SWH9 247 aa8.04□□□□□ -1.12
HERC1-212ENST00000561348 C10orf99Q6UWK7 81 aa8.04□□□□□ -1.12
HERC1-212ENST00000561348 ZNF833PQ6ZTB9 187 aa8.04□□□□□ -1.12
HERC1-212ENST00000561348 CLVS1Q8IUQ0 354 aaPredicted RBP8.04□□□□□ -1.12
HERC1-212ENST00000561348 FOXRED2Q8IWF2 684 aa8.04□□□□□ -1.12
HERC1-212ENST00000561348 GVQW1Q8N7I0 195 aa8.04□□□□□ -1.12
HERC1-212ENST00000561348 OR4X2Q8NGF9 303 aa8.04□□□□□ -1.12
HERC1-212ENST00000561348 RITA1Q96K30 269 aa8.04□□□□□ -1.12
HERC1-212ENST00000561348 CLCC1Q96S66 551 aa8.04□□□□□ -1.12
HERC1-212ENST00000561348 CITED2Q99967 270 aaPredicted RBP8.04□□□□□ -1.12
HERC1-212ENST00000561348 DCSTAMPQ9H295 470 aa8.04□□□□□ -1.12
HERC1-212ENST00000561348 IFT46Q9NQC8 304 aa8.04□□□□□ -1.12
HERC1-212ENST00000561348 KIAA1456Q9P272 454 aa8.04□□□□□ -1.12
HERC1-212ENST00000561348 SMIM31A0A1B0GVY4 71 aa8.03□□□□□ -1.12
HERC1-212ENST00000561348 PSMB11A5LHX3 300 aa8.03□□□□□ -1.12
HERC1-212ENST00000561348 CCDC160A6NGH7 325 aa8.03□□□□□ -1.12
HERC1-212ENST00000561348 TRIM64CA6NLI5 447 aa8.03□□□□□ -1.12
HERC1-212ENST00000561348 LINC01548A6NM66 108 aa8.03□□□□□ -1.12
HERC1-212ENST00000561348 SSX5O60225 188 aa8.03□□□□□ -1.12
HERC1-212ENST00000561348 NOL3O60936 208 aaKnown RBP8.03□□□□□ -1.12
HERC1-212ENST00000561348 APOA2P02652 100 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms