RNA–Protein interactions for RNA: ENST00000561330.1

USP8-218, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 1 (best)

Gene USP8, Length 815 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-218ENST00000561330 PPWD1Q96BP3 646 aaKnown RBP1.15□□□□□ -2.23
USP8-218ENST00000561330 CCDC124Q96CT7 223 aaKnown RBP1.15□□□□□ -2.23
USP8-218ENST00000561330 MIEN1Q9BRT3 115 aa1.15□□□□□ -2.23
USP8-218ENST00000561330 UGT2B28Q9BY64 529 aa1.15□□□□□ -2.23
USP8-218ENST00000561330 MED28Q9H204 178 aa1.15□□□□□ -2.23
USP8-218ENST00000561330 ENPP5Q9UJA9 477 aa1.15□□□□□ -2.23
USP8-218ENST00000561330 MYO5BQ9ULV0 1848 aa1.15□□□□□ -2.23
USP8-218ENST00000561330 KDM5BQ9UGL1 1544 aa1.15□□□□□ -2.23
USP8-218ENST00000561330 UGT2B11O75310 529 aa1.14□□□□□ -2.23
USP8-218ENST00000561330 STX3Q13277 289 aa1.14□□□□□ -2.23
USP8-218ENST00000561330 TMEM249Q2WGJ8 235 aa1.14□□□□□ -2.23
USP8-218ENST00000561330 PABPC1L2AQ5JQF8 200 aa1.14□□□□□ -2.23
USP8-218ENST00000561330 CCDC112Q8NEF3 446 aa1.14□□□□□ -2.23
USP8-218ENST00000561330 OR51H1Q8NH63 302 aa1.14□□□□□ -2.23
USP8-218ENST00000561330 RORBQ92753 470 aa1.14□□□□□ -2.23
USP8-218ENST00000561330 HBEGFQ99075 208 aa1.14□□□□□ -2.23
USP8-218ENST00000561330 FAM215AQ9Y5M1 114 aa1.14□□□□□ -2.23
USP8-218ENST00000561330 NCKAP5O14513 1909 aa1.13□□□□□ -2.23
USP8-218ENST00000561330 TRAV41A0A0B4J266 112 aa1.13□□□□□ -2.23
USP8-218ENST00000561330 OR5K4A6NMS3 321 aa1.13□□□□□ -2.23
USP8-218ENST00000561330 SULT1C2O00338 296 aa1.13□□□□□ -2.23
USP8-218ENST00000561330 SLC17A3O00476 420 aa1.13□□□□□ -2.23
USP8-218ENST00000561330 LIMS3P0CW19 117 aa1.13□□□□□ -2.23
USP8-218ENST00000561330 LIMS4P0CW20 117 aa1.13□□□□□ -2.23
USP8-218ENST00000561330 CCL3P10147 92 aa1.13□□□□□ -2.23
USP8-218ENST00000561330 SERPINB10P48595 397 aa1.13□□□□□ -2.23
USP8-218ENST00000561330 C1DQ13901 141 aaKnown RBP1.13□□□□□ -2.23
USP8-218ENST00000561330 OR4D1Q15615 310 aa1.13□□□□□ -2.23
USP8-218ENST00000561330 LHFPL1Q86WI0 220 aa1.13□□□□□ -2.23
USP8-218ENST00000561330 C10orf105Q8TEF2 133 aa1.13□□□□□ -2.23
USP8-218ENST00000561330 ACBD6Q9BR61 282 aa1.13□□□□□ -2.23
USP8-218ENST00000561330 SNX10Q9Y5X0 201 aa1.13□□□□□ -2.23
USP8-218ENST00000561330 ZNF532Q9HCE3 1301 aa1.13□□□□□ -2.23
USP8-218ENST00000561330 KIAA0232Q92628 1395 aa1.12□□□□□ -2.23
USP8-218ENST00000561330 TMSB15BA0A087X1C1 80 aa1.12□□□□□ -2.23
USP8-218ENST00000561330 A8MUN3 132 aa1.12□□□□□ -2.23
USP8-218ENST00000561330 TNFAIP8O95379 198 aa1.12□□□□□ -2.23
USP8-218ENST00000561330 FADS2O95864 444 aaKnown RBP1.12□□□□□ -2.23
USP8-218ENST00000561330 IGLV3-27P01718 113 aa1.12□□□□□ -2.23
USP8-218ENST00000561330 IGHV1-69P01742 117 aa1.12□□□□□ -2.23
USP8-218ENST00000561330 APOA1P02647 267 aa1.12□□□□□ -2.23
USP8-218ENST00000561330 ZNF705DP0CH99 300 aaPredicted RBP1.12□□□□□ -2.23
USP8-218ENST00000561330 ZNF705BP0CI00 300 aaPredicted RBP1.12□□□□□ -2.23
USP8-218ENST00000561330 ZNF728P0DKX0 622 aa1.12□□□□□ -2.23
USP8-218ENST00000561330 OR13C7P0DN81 318 aa1.12□□□□□ -2.23
USP8-218ENST00000561330 IDH3GP51553 393 aaPredicted RBP1.12□□□□□ -2.23
USP8-218ENST00000561330 LINC00313P59037 77 aa1.12□□□□□ -2.23
USP8-218ENST00000561330 TAS2R45P59539 299 aa1.12□□□□□ -2.23
USP8-218ENST00000561330 PLCZ1Q86YW0 608 aa1.12□□□□□ -2.23
USP8-218ENST00000561330 OR5J2Q8NH18 312 aa1.12□□□□□ -2.23
USP8-218ENST00000561330 CCDC12Q8WUD4 166 aaPredicted RBP1.12□□□□□ -2.23
USP8-218ENST00000561330 TNFAIP8L1Q8WVP5 186 aa1.12□□□□□ -2.23
USP8-218ENST00000561330 RNF133Q8WVZ7 376 aa1.12□□□□□ -2.23
USP8-218ENST00000561330 SERPINB11Q96P15 392 aa1.12□□□□□ -2.23
USP8-218ENST00000561330 RETNLBQ9BQ08 111 aa1.12□□□□□ -2.23
USP8-218ENST00000561330 GLS2Q9UI32 602 aa1.12□□□□□ -2.23
USP8-218ENST00000561330 ARHGAP32A7KAX9 2087 aa1.12□□□□□ -2.23
USP8-218ENST00000561330 ATAD5Q96QE3 1844 aa1.11□□□□□ -2.23
USP8-218ENST00000561330 RFPL4AA6NLU0 287 aa1.11□□□□□ -2.23
USP8-218ENST00000561330 ZNF705FA8MVS1 300 aaPredicted RBP1.11□□□□□ -2.23
USP8-218ENST00000561330 OR11H12B2RN74 326 aa1.11□□□□□ -2.23
USP8-218ENST00000561330 RFPL4AL1F8VTS6 287 aa1.11□□□□□ -2.23
USP8-218ENST00000561330 LIN7AO14910 233 aaPredicted RBP1.11□□□□□ -2.23
USP8-218ENST00000561330 PSMG1O95456 288 aa1.11□□□□□ -2.23
USP8-218ENST00000561330 IVLP07476 585 aa1.11□□□□□ -2.23
USP8-218ENST00000561330 CRYBB3P26998 211 aa1.11□□□□□ -2.23
USP8-218ENST00000561330 LCN1P31025 176 aa1.11□□□□□ -2.23
USP8-218ENST00000561330 XCL1P47992 114 aa1.11□□□□□ -2.23
USP8-218ENST00000561330 EXOC3L4Q17RC7 722 aa1.11□□□□□ -2.23
USP8-218ENST00000561330 TBC1D28Q2M2D7 210 aa1.11□□□□□ -2.23
USP8-218ENST00000561330 TMEM31Q5JXX7 168 aa1.11□□□□□ -2.23
USP8-218ENST00000561330 AMTNQ6UX39 209 aa1.11□□□□□ -2.23
USP8-218ENST00000561330 SLC35E3Q7Z769 313 aa1.11□□□□□ -2.23
USP8-218ENST00000561330 LRRC28Q86X40 367 aaPredicted RBP1.11□□□□□ -2.23
USP8-218ENST00000561330 NATD1Q8N6N6 113 aa1.11□□□□□ -2.23
USP8-218ENST00000561330 OR8B12Q8NGG6 310 aa1.11□□□□□ -2.23
USP8-218ENST00000561330 OR11H2Q8NH07 326 aa1.11□□□□□ -2.23
USP8-218ENST00000561330 TMEM56Q96MV1 263 aa1.11□□□□□ -2.23
USP8-218ENST00000561330 UBQLN4Q9NRR5 601 aa1.11□□□□□ -2.23
USP8-218ENST00000561330 POFUT2Q9Y2G5 429 aa1.11□□□□□ -2.23
USP8-218ENST00000561330 CLUHO75153 1309 aa1.11□□□□□ -2.23
USP8-218ENST00000561330 FN1P02751 2386 aaKnown RBP1.11□□□□□ -2.23
USP8-218ENST00000561330 MDFIC2A0A1B0GVS7 189 aa1.1□□□□□ -2.23
USP8-218ENST00000561330 UBE2L6O14933 153 aa1.1□□□□□ -2.23
USP8-218ENST00000561330 UCHL1P09936 223 aa1.1□□□□□ -2.23
USP8-218ENST00000561330 HSPA9P38646 679 aaKnown RBP1.1□□□□□ -2.23
USP8-218ENST00000561330 KCNJ3P48549 501 aa1.1□□□□□ -2.23
USP8-218ENST00000561330 PSMD7P51665 324 aa1.1□□□□□ -2.23
USP8-218ENST00000561330 RAB8AP61006 207 aa1.1□□□□□ -2.23
USP8-218ENST00000561330 SLC38A11Q08AI6 406 aa1.1□□□□□ -2.23
USP8-218ENST00000561330 FBXO48Q5FWF7 155 aa1.1□□□□□ -2.23
USP8-218ENST00000561330 XKRXQ6PP77 449 aa1.1□□□□□ -2.23
USP8-218ENST00000561330 SLC13A5Q86YT5 568 aaPredicted RBP1.1□□□□□ -2.23
USP8-218ENST00000561330 CNEP1R1Q8N9A8 125 aa1.1□□□□□ -2.23
USP8-218ENST00000561330 ACY3Q96HD9 319 aa1.1□□□□□ -2.23
USP8-218ENST00000561330 SLC35G5Q96KT7 338 aa1.1□□□□□ -2.23
USP8-218ENST00000561330 FAM210AQ96ND0 272 aa1.1□□□□□ -2.23
USP8-218ENST00000561330 SIKE1Q9BRV8 207 aa1.1□□□□□ -2.23
USP8-218ENST00000561330 CYSTM1Q9H1C7 97 aa1.1□□□□□ -2.23
USP8-218ENST00000561330 TRGV5A0A0B4J1U4 118 aa1.09□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms