RNA–Protein interactions for RNA: ENST00000560383.5

SNRPA1-210, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 4

Gene SNRPA1, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-210ENST00000560383 PIPOXQ9P0Z9 390 aa12□□□□□ -0.49
SNRPA1-210ENST00000560383 SAA2-SAA4A0A096LPE2 208 aa11.99□□□□□ -0.49
SNRPA1-210ENST00000560383 IGKV1-6A0A0C4DH72 117 aa11.99□□□□□ -0.49
SNRPA1-210ENST00000560383 SMIM30A4D0T7 59 aa11.99□□□□□ -0.49
SNRPA1-210ENST00000560383 TRDCB7Z8K6 153 aa11.99□□□□□ -0.49
SNRPA1-210ENST00000560383 RAB29O14966 203 aa11.99□□□□□ -0.49
SNRPA1-210ENST00000560383 ST8SIA5O15466 376 aa11.99□□□□□ -0.49
SNRPA1-210ENST00000560383 DIRAS3O95661 229 aa11.99□□□□□ -0.49
SNRPA1-210ENST00000560383 CD3GP09693 182 aa11.99□□□□□ -0.49
SNRPA1-210ENST00000560383 SAA2P0DJI9 122 aaPredicted RBP11.99□□□□□ -0.49
SNRPA1-210ENST00000560383 SDC2P34741 201 aa11.99□□□□□ -0.49
SNRPA1-210ENST00000560383 OR3A3P47888 321 aa11.99□□□□□ -0.49
SNRPA1-210ENST00000560383 ARL6IP1Q15041 203 aa11.99□□□□□ -0.49
SNRPA1-210ENST00000560383 SRSF7Q16629 238 aaKnown RBP eCLIP11.99□□□□□ -0.49
SNRPA1-210ENST00000560383 SFXN4Q6P4A7 337 aa11.99□□□□□ -0.49
SNRPA1-210ENST00000560383 FAM71E2Q8N5Q1 922 aa11.99□□□□□ -0.49
SNRPA1-210ENST00000560383 EDARADDQ8WWZ3 215 aa11.99□□□□□ -0.49
SNRPA1-210ENST00000560383 S1PR3Q99500 378 aa11.99□□□□□ -0.49
SNRPA1-210ENST00000560383 CHCHD6Q9BRQ6 235 aa11.99□□□□□ -0.49
SNRPA1-210ENST00000560383 MRPL20Q9BYC9 149 aaKnown RBP11.99□□□□□ -0.49
SNRPA1-210ENST00000560383 PARP12Q9H0J9 701 aaKnown RBP11.99□□□□□ -0.49
SNRPA1-210ENST00000560383 C11orf54Q9H0W9 315 aaPredicted RBP11.99□□□□□ -0.49
SNRPA1-210ENST00000560383 NECAP2Q9NVZ3 263 aa11.99□□□□□ -0.49
SNRPA1-210ENST00000560383 OR1A1Q9P1Q5 309 aa11.99□□□□□ -0.49
SNRPA1-210ENST00000560383 A0A087WXM4 84 aa11.98□□□□□ -0.49
SNRPA1-210ENST00000560383 TRIM64CA6NLI5 447 aa11.98□□□□□ -0.49
SNRPA1-210ENST00000560383 NCBP2LA6PVI3 153 aaKnown RBP11.98□□□□□ -0.49
SNRPA1-210ENST00000560383 TNFAIP8O95379 198 aa11.98□□□□□ -0.49
SNRPA1-210ENST00000560383 FCGR3AP08637 254 aa11.98□□□□□ -0.49
SNRPA1-210ENST00000560383 GNB3P16520 340 aa11.98□□□□□ -0.49
SNRPA1-210ENST00000560383 CEACAM6P40199 344 aa11.98□□□□□ -0.49
SNRPA1-210ENST00000560383 F2RL1P55085 397 aa11.98□□□□□ -0.49
SNRPA1-210ENST00000560383 SCAND1P57086 179 aa11.98□□□□□ -0.49
SNRPA1-210ENST00000560383 OXLD1Q5BKU9 147 aa11.98□□□□□ -0.49
SNRPA1-210ENST00000560383 Q6ZS49 121 aa11.98□□□□□ -0.49
SNRPA1-210ENST00000560383 SLC35E3Q7Z769 313 aa11.98□□□□□ -0.49
SNRPA1-210ENST00000560383 WFDC9Q8NEX5 89 aa11.98□□□□□ -0.49
SNRPA1-210ENST00000560383 TSPAN14Q8NG11 270 aa11.98□□□□□ -0.49
SNRPA1-210ENST00000560383 OR4X2Q8NGF9 303 aa11.98□□□□□ -0.49
SNRPA1-210ENST00000560383 OR4A4PQ8NGN8 299 aa11.98□□□□□ -0.49
SNRPA1-210ENST00000560383 CENPOQ9BU64 300 aa11.98□□□□□ -0.49
SNRPA1-210ENST00000560383 RNF167Q9H6Y7 350 aa11.98□□□□□ -0.49
SNRPA1-210ENST00000560383 DAPK2Q9UIK4 370 aa11.98□□□□□ -0.49
SNRPA1-210ENST00000560383 FABP7O15540 132 aa11.97□□□□□ -0.49
SNRPA1-210ENST00000560383 GPR12P47775 334 aa11.97□□□□□ -0.49
SNRPA1-210ENST00000560383 SERPINB10P48595 397 aa11.97□□□□□ -0.49
SNRPA1-210ENST00000560383 MRPS15P82914 257 aaKnown RBP11.97□□□□□ -0.49
SNRPA1-210ENST00000560383 KIR2DS1Q14954 304 aa11.97□□□□□ -0.49
SNRPA1-210ENST00000560383 TIMM50Q3ZCQ8 353 aa11.97□□□□□ -0.49
SNRPA1-210ENST00000560383 C10orf99Q6UWK7 81 aa11.97□□□□□ -0.49
SNRPA1-210ENST00000560383 CHPT1Q8WUD6 406 aa11.97□□□□□ -0.49
SNRPA1-210ENST00000560383 PHF21AQ96BD5 680 aa11.97□□□□□ -0.49
SNRPA1-210ENST00000560383 CABLES2Q9BTV7 478 aa11.97□□□□□ -0.49
SNRPA1-210ENST00000560383 ATG5Q9H1Y0 275 aa11.97□□□□□ -0.49
SNRPA1-210ENST00000560383 ZNF580Q9UK33 172 aa11.97□□□□□ -0.49
SNRPA1-210ENST00000560383 TSSC4Q9Y5U2 329 aaPredicted RBP11.97□□□□□ -0.49
SNRPA1-210ENST00000560383 LOC100506127A0A0U1RQW1 187 aa11.96□□□□□ -0.49
SNRPA1-210ENST00000560383 PSMB11A5LHX3 300 aa11.96□□□□□ -0.49
SNRPA1-210ENST00000560383 LINC01548A6NM66 108 aa11.96□□□□□ -0.49
SNRPA1-210ENST00000560383 HSPA12AO43301 675 aa11.96□□□□□ -0.49
SNRPA1-210ENST00000560383 TMEM127O75204 238 aa11.96□□□□□ -0.49
SNRPA1-210ENST00000560383 PROP1O75360 226 aa11.96□□□□□ -0.49
SNRPA1-210ENST00000560383 SCGNO76038 276 aa11.96□□□□□ -0.49
SNRPA1-210ENST00000560383 CLEC2LP0C7M8 214 aa11.96□□□□□ -0.49
SNRPA1-210ENST00000560383 CT45A6P0DMU7 189 aa11.96□□□□□ -0.49
SNRPA1-210ENST00000560383 CT45A5P0DMU8 189 aa11.96□□□□□ -0.49
SNRPA1-210ENST00000560383 CT45A7P0DMV0 189 aa11.96□□□□□ -0.49
SNRPA1-210ENST00000560383 PF4V1P10720 104 aa11.96□□□□□ -0.49
SNRPA1-210ENST00000560383 FOXRED2Q8IWF2 684 aa11.96□□□□□ -0.49
SNRPA1-210ENST00000560383 STPG2Q8N412 459 aa11.96□□□□□ -0.49
SNRPA1-210ENST00000560383 RBMXL1Q96E39 390 aaKnown RBP11.96□□□□□ -0.49
SNRPA1-210ENST00000560383 YIPF6Q96EC8 236 aa11.96□□□□□ -0.49
SNRPA1-210ENST00000560383 ABHD14BQ96IU4 210 aa11.96□□□□□ -0.49
SNRPA1-210ENST00000560383 NOL4LQ96MY1 436 aaPredicted RBP11.96□□□□□ -0.49
SNRPA1-210ENST00000560383 TRBV6-7A0A0A0MS04 114 aa11.95□□□□□ -0.5
SNRPA1-210ENST00000560383 TCRBV4S1A1TA0A5B7 111 aa11.95□□□□□ -0.5
SNRPA1-210ENST00000560383 AP4M1O00189 453 aa11.95□□□□□ -0.5
SNRPA1-210ENST00000560383 GSTT2P0CG29 244 aa11.95□□□□□ -0.5
SNRPA1-210ENST00000560383 GSTT2BP0CG30 244 aa11.95□□□□□ -0.5
SNRPA1-210ENST00000560383 SNRPBP14678 240 aaKnown RBP11.95□□□□□ -0.5
SNRPA1-210ENST00000560383 CD33P20138 364 aa11.95□□□□□ -0.5
SNRPA1-210ENST00000560383 DTYMKP23919 212 aa11.95□□□□□ -0.5
SNRPA1-210ENST00000560383 ACTBP60709 375 aa11.95□□□□□ -0.5
SNRPA1-210ENST00000560383 MXD1Q05195 221 aa11.95□□□□□ -0.5
SNRPA1-210ENST00000560383 RPL39P5Q59GN2 51 aa11.95□□□□□ -0.5
SNRPA1-210ENST00000560383 ZNF329Q86UD4 541 aa11.95□□□□□ -0.5
SNRPA1-210ENST00000560383 COMMD1Q8N668 190 aa11.95□□□□□ -0.5
SNRPA1-210ENST00000560383 NPBQ8NG41 125 aa11.95□□□□□ -0.5
SNRPA1-210ENST00000560383 OR5AN1Q8NGI8 311 aa11.95□□□□□ -0.5
SNRPA1-210ENST00000560383 LGALS14Q8TCE9 139 aa11.95□□□□□ -0.5
SNRPA1-210ENST00000560383 RITA1Q96K30 269 aa11.95□□□□□ -0.5
SNRPA1-210ENST00000560383 RASL11BQ9BPW5 248 aa11.95□□□□□ -0.5
SNRPA1-210ENST00000560383 VCX3AQ9NNX9 186 aa11.95□□□□□ -0.5
SNRPA1-210ENST00000560383 AURKAIP1Q9NWT8 199 aaPredicted RBP11.95□□□□□ -0.5
SNRPA1-210ENST00000560383 RDH8Q9NYR8 311 aa11.95□□□□□ -0.5
SNRPA1-210ENST00000560383 GAB2Q9UQC2 676 aa11.95□□□□□ -0.5
SNRPA1-210ENST00000560383 ETV7Q9Y603 341 aa11.95□□□□□ -0.5
SNRPA1-210ENST00000560383 A0A075B6Q4 140 aa11.94□□□□□ -0.5
SNRPA1-210ENST00000560383 A0A1W2PRX2 142 aa11.94□□□□□ -0.5
SNRPA1-210ENST00000560383 OR5H14A6NHG9 310 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms