RNA–Protein interactions for RNA: ENST00000558989.1

SPG11-214, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 1,816 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-214ENST00000558989 NDUFA7O95182 113 aa7.76□□□□□ -1.17
SPG11-214ENST00000558989 GABARAPL2P60520 117 aa7.76□□□□□ -1.17
SPG11-214ENST00000558989 DIAPH2-AS1Q14236 149 aa7.76□□□□□ -1.17
SPG11-214ENST00000558989 HLA-DRB5Q30154 266 aa7.76□□□□□ -1.17
SPG11-214ENST00000558989 SIGIRRQ6IA17 410 aa7.76□□□□□ -1.17
SPG11-214ENST00000558989 SHISA2Q6UWI4 295 aa7.76□□□□□ -1.17
SPG11-214ENST00000558989 C8orf86Q6ZUL3 223 aa7.76□□□□□ -1.17
SPG11-214ENST00000558989 LINC00596Q86U02 117 aa7.76□□□□□ -1.17
SPG11-214ENST00000558989 FAM219AQ8IW50 185 aa7.76□□□□□ -1.17
SPG11-214ENST00000558989 COMMD1Q8N668 190 aa7.76□□□□□ -1.17
SPG11-214ENST00000558989 OR10V1Q8NGI7 309 aa7.76□□□□□ -1.17
SPG11-214ENST00000558989 ZNF596Q8TC21 504 aa7.76□□□□□ -1.17
SPG11-214ENST00000558989 RBMXL1Q96E39 390 aaKnown RBP7.76□□□□□ -1.17
SPG11-214ENST00000558989 TMEM59Q9BXS4 323 aa7.76□□□□□ -1.17
SPG11-214ENST00000558989 ISYNA1Q9NPH2 558 aa7.76□□□□□ -1.17
SPG11-214ENST00000558989 DPM3Q9P2X0 92 aa7.76□□□□□ -1.17
SPG11-214ENST00000558989 PSG11Q9UQ72 335 aa7.76□□□□□ -1.17
SPG11-214ENST00000558989 LEUTXA8MZ59 168 aa7.75□□□□□ -1.17
SPG11-214ENST00000558989 BUB1B-PAK6H3BSN5 160 aa7.75□□□□□ -1.17
SPG11-214ENST00000558989 SDCBPO00560 298 aaPredicted RBP7.75□□□□□ -1.17
SPG11-214ENST00000558989 ARL6IP5O75915 188 aa7.75□□□□□ -1.17
SPG11-214ENST00000558989 MT-ND4P03905 459 aa7.75□□□□□ -1.17
SPG11-214ENST00000558989 CGB3P0DN86 165 aa7.75□□□□□ -1.17
SPG11-214ENST00000558989 CGB7P0DN87 165 aa7.75□□□□□ -1.17
SPG11-214ENST00000558989 RCC1P18754 421 aaPredicted RBP7.75□□□□□ -1.17
SPG11-214ENST00000558989 GABRA5P31644 462 aa7.75□□□□□ -1.17
SPG11-214ENST00000558989 REG1BP48304 166 aa7.75□□□□□ -1.17
SPG11-214ENST00000558989 KCNJ3P48549 501 aa7.75□□□□□ -1.17
SPG11-214ENST00000558989 ARHGDIBP52566 201 aa7.75□□□□□ -1.17
SPG11-214ENST00000558989 OR10A3P58181 314 aa7.75□□□□□ -1.17
SPG11-214ENST00000558989 LOXL3P58215 753 aa7.75□□□□□ -1.17
SPG11-214ENST00000558989 RPL23AP62750 156 aaKnown RBP7.75□□□□□ -1.17
SPG11-214ENST00000558989 UNC119Q13432 240 aa7.75□□□□□ -1.17
SPG11-214ENST00000558989 TRAM1Q15629 374 aa7.75□□□□□ -1.17
SPG11-214ENST00000558989 C1orf100Q5SVJ3 147 aa7.75□□□□□ -1.17
SPG11-214ENST00000558989 SERTAD4-AS1Q5TG53 156 aa7.75□□□□□ -1.17
SPG11-214ENST00000558989 C22orf42Q6IC83 251 aa7.75□□□□□ -1.17
SPG11-214ENST00000558989 ZNF497Q6ZNH5 498 aa7.75□□□□□ -1.17
SPG11-214ENST00000558989 C6orf201Q7Z4U5 140 aa7.75□□□□□ -1.17
SPG11-214ENST00000558989 SVOPQ8N4V2 548 aa7.75□□□□□ -1.17
SPG11-214ENST00000558989 OR51D1Q8NGF3 324 aa7.75□□□□□ -1.17
SPG11-214ENST00000558989 OR9G1Q8NH87 305 aa7.75□□□□□ -1.17
SPG11-214ENST00000558989 OR1L1Q8NH94 360 aa7.75□□□□□ -1.17
SPG11-214ENST00000558989 WFDC12Q8WWY7 111 aa7.75□□□□□ -1.17
SPG11-214ENST00000558989 PHYHIPQ92561 330 aa7.75□□□□□ -1.17
SPG11-214ENST00000558989 NEDD4LQ96PU5 975 aa7.75□□□□□ -1.17
SPG11-214ENST00000558989 SULT4A1Q9BR01 284 aa7.75□□□□□ -1.17
SPG11-214ENST00000558989 FAAP24Q9BTP7 215 aa7.75□□□□□ -1.17
SPG11-214ENST00000558989 TCF19Q9Y242 345 aa7.75□□□□□ -1.17
SPG11-214ENST00000558989 CGB1A6NKQ9 187 aa7.75□□□□□ -1.17
SPG11-214ENST00000558989 J3QR06 171 aa7.75□□□□□ -1.17
SPG11-214ENST00000558989 PDCD6O75340 191 aa7.75□□□□□ -1.17
SPG11-214ENST00000558989 IGLV1-47P01700 117 aa7.75□□□□□ -1.17
SPG11-214ENST00000558989 VSIG10L2P0DP72 767 aa7.75□□□□□ -1.17
SPG11-214ENST00000558989 ARSBP15848 533 aa7.75□□□□□ -1.17
SPG11-214ENST00000558989 FUT3P21217 361 aa7.75□□□□□ -1.17
SPG11-214ENST00000558989 PSMA1P25786 263 aaKnown RBP7.75□□□□□ -1.17
SPG11-214ENST00000558989 BLVRBP30043 206 aaPredicted RBP7.75□□□□□ -1.17
SPG11-214ENST00000558989 PLA2G7Q13093 441 aa7.75□□□□□ -1.17
SPG11-214ENST00000558989 NEDD8Q15843 81 aa7.75□□□□□ -1.17
SPG11-214ENST00000558989 RAB11BQ15907 218 aa7.75□□□□□ -1.17
SPG11-214ENST00000558989 TPTE2P1Q5T6R2 138 aa7.75□□□□□ -1.17
SPG11-214ENST00000558989 MINOS1Q5TGZ0 78 aa7.75□□□□□ -1.17
SPG11-214ENST00000558989 OR6M1Q8NGM8 313 aa7.75□□□□□ -1.17
SPG11-214ENST00000558989 OR4C13Q8NGP0 309 aa7.75□□□□□ -1.17
SPG11-214ENST00000558989 OR10X1Q8NGY0 326 aa7.75□□□□□ -1.17
SPG11-214ENST00000558989 TOMM40LQ969M1 308 aa7.75□□□□□ -1.17
SPG11-214ENST00000558989 RPEQ96AT9 228 aa7.75□□□□□ -1.17
SPG11-214ENST00000558989 MRPS24Q96EL2 167 aaKnown RBP7.75□□□□□ -1.17
SPG11-214ENST00000558989 MMP28Q9H239 520 aa7.75□□□□□ -1.17
SPG11-214ENST00000558989 CHMP1AQ9HD42 196 aaPredicted RBP7.75□□□□□ -1.17
SPG11-214ENST00000558989 RCC2Q9P258 522 aaKnown RBP7.75□□□□□ -1.17
SPG11-214ENST00000558989 PRELID1Q9Y255 219 aa7.75□□□□□ -1.17
SPG11-214ENST00000558989 CBY1Q9Y3M2 126 aa7.75□□□□□ -1.17
SPG11-214ENST00000558989 MINOS1-NBL1R4GNA1 71 aa7.75□□□□□ -1.17
SPG11-214ENST00000558989 NBEAL1Q6ZS30 2694 aa7.74□□□□□ -1.17
SPG11-214ENST00000558989 A0A0A6YYD4 124 aa7.74□□□□□ -1.17
SPG11-214ENST00000558989 A6NDX4 124 aa7.74□□□□□ -1.17
SPG11-214ENST00000558989 C12orf77C9JDV5 145 aa7.74□□□□□ -1.17
SPG11-214ENST00000558989 NPIPB11E5RHQ5 1161 aa7.74□□□□□ -1.17
SPG11-214ENST00000558989 C15orf65H3BRN8 121 aa7.74□□□□□ -1.17
SPG11-214ENST00000558989 CCRL2O00421 344 aa7.74□□□□□ -1.17
SPG11-214ENST00000558989 SLC22A1O15245 554 aa7.74□□□□□ -1.17
SPG11-214ENST00000558989 SOCS1O15524 211 aa7.74□□□□□ -1.17
SPG11-214ENST00000558989 UBBP0CG47 229 aa7.74□□□□□ -1.17
SPG11-214ENST00000558989 GZMHP20718 246 aa7.74□□□□□ -1.17
SPG11-214ENST00000558989 MYL9P24844 172 aa7.74□□□□□ -1.17
SPG11-214ENST00000558989 CEACAM3P40198 252 aa7.74□□□□□ -1.17
SPG11-214ENST00000558989 RPS27AP62979 156 aaKnown RBP7.74□□□□□ -1.17
SPG11-214ENST00000558989 HNF4GQ14541 408 aa7.74□□□□□ -1.17
SPG11-214ENST00000558989 Q6ZS46 218 aa7.74□□□□□ -1.17
SPG11-214ENST00000558989 MINDY2Q8NBR6 621 aa7.74□□□□□ -1.17
SPG11-214ENST00000558989 KCNG3Q8TAE7 436 aa7.74□□□□□ -1.17
SPG11-214ENST00000558989 CAPSLQ8WWF8 208 aa7.74□□□□□ -1.17
SPG11-214ENST00000558989 TMEM68Q96MH6 324 aa7.74□□□□□ -1.17
SPG11-214ENST00000558989 TREM1Q9NP99 234 aa7.74□□□□□ -1.17
SPG11-214ENST00000558989 NDUFB11Q9NX14 153 aa7.74□□□□□ -1.17
SPG11-214ENST00000558989 GNG12Q9UBI6 72 aa7.74□□□□□ -1.17
SPG11-214ENST00000558989 MGAT4CQ9UBM8 478 aa7.74□□□□□ -1.17
SPG11-214ENST00000558989 LRRC42Q9Y546 428 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms