RNA–Protein interactions for RNA: ENST00000558059.5

SNRPA1-206, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 678 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-206ENST00000558059 ITGB1BP1O14713 200 aa6.91□□□□□ -1.3
SNRPA1-206ENST00000558059 PDCD5O14737 125 aa6.91□□□□□ -1.3
SNRPA1-206ENST00000558059 SCTP09683 121 aa6.91□□□□□ -1.3
SNRPA1-206ENST00000558059 SAA2P0DJI9 122 aaPredicted RBP6.91□□□□□ -1.3
SNRPA1-206ENST00000558059 PF4V1P10720 104 aa6.91□□□□□ -1.3
SNRPA1-206ENST00000558059 GALP22466 123 aa6.91□□□□□ -1.3
SNRPA1-206ENST00000558059 RANBP1P43487 201 aa6.91□□□□□ -1.3
SNRPA1-206ENST00000558059 MOGAT2Q3SYC2 334 aa6.91□□□□□ -1.3
SNRPA1-206ENST00000558059 C22orf42Q6IC83 251 aa6.91□□□□□ -1.3
SNRPA1-206ENST00000558059 NR2C2APQ86WQ0 139 aa6.91□□□□□ -1.3
SNRPA1-206ENST00000558059 FOXRED2Q8IWF2 684 aa6.91□□□□□ -1.3
SNRPA1-206ENST00000558059 STPG2Q8N412 459 aa6.91□□□□□ -1.3
SNRPA1-206ENST00000558059 OR2AK2Q8NG84 335 aa6.91□□□□□ -1.3
SNRPA1-206ENST00000558059 OR56B1Q8NGI3 324 aa6.91□□□□□ -1.3
SNRPA1-206ENST00000558059 CMSS1Q9BQ75 279 aaKnown RBP6.91□□□□□ -1.3
SNRPA1-206ENST00000558059 HSPB9Q9BQS6 159 aa6.91□□□□□ -1.3
SNRPA1-206ENST00000558059 AGMATQ9BSE5 352 aa6.91□□□□□ -1.3
SNRPA1-206ENST00000558059 Q9H521 79 aa6.91□□□□□ -1.3
SNRPA1-206ENST00000558059 Q9N2K0 584 aa6.91□□□□□ -1.3
SNRPA1-206ENST00000558059 SLC23A1Q9UHI7 598 aa6.91□□□□□ -1.3
SNRPA1-206ENST00000558059 KCNK7Q9Y2U2 307 aa6.91□□□□□ -1.3
SNRPA1-206ENST00000558059 A0A0B4J203 849 aa6.9□□□□□ -1.3
SNRPA1-206ENST00000558059 IGKV1-6A0A0C4DH72 117 aa6.9□□□□□ -1.3
SNRPA1-206ENST00000558059 AP4M1O00189 453 aa6.9□□□□□ -1.3
SNRPA1-206ENST00000558059 RAB27BO00194 218 aa6.9□□□□□ -1.3
SNRPA1-206ENST00000558059 PRB2P02812 416 aaPredicted RBP6.9□□□□□ -1.3
SNRPA1-206ENST00000558059 CT45A6P0DMU7 189 aa6.9□□□□□ -1.3
SNRPA1-206ENST00000558059 CT45A5P0DMU8 189 aa6.9□□□□□ -1.3
SNRPA1-206ENST00000558059 CT45A7P0DMV0 189 aa6.9□□□□□ -1.3
SNRPA1-206ENST00000558059 RAB3BP20337 219 aa6.9□□□□□ -1.3
SNRPA1-206ENST00000558059 MYL9P24844 172 aa6.9□□□□□ -1.3
SNRPA1-206ENST00000558059 CNTFRP26992 372 aa6.9□□□□□ -1.3
SNRPA1-206ENST00000558059 PSMB9P28065 219 aa6.9□□□□□ -1.3
SNRPA1-206ENST00000558059 FGF9P31371 208 aaPredicted RBP6.9□□□□□ -1.3
SNRPA1-206ENST00000558059 ACTBP60709 375 aa6.9□□□□□ -1.3
SNRPA1-206ENST00000558059 RPL23AP62750 156 aaKnown RBP6.9□□□□□ -1.3
SNRPA1-206ENST00000558059 HLA-DRB3P79483 266 aa6.9□□□□□ -1.3
SNRPA1-206ENST00000558059 KHDC1LQ5JSQ8 128 aa6.9□□□□□ -1.3
SNRPA1-206ENST00000558059 FAM71F2Q6NXP2 309 aa6.9□□□□□ -1.3
SNRPA1-206ENST00000558059 ETV3LQ6ZN32 361 aa6.9□□□□□ -1.3
SNRPA1-206ENST00000558059 C18orf65Q6ZTR6 163 aa6.9□□□□□ -1.3
SNRPA1-206ENST00000558059 RASL11BQ9BPW5 248 aa6.9□□□□□ -1.3
SNRPA1-206ENST00000558059 C11orf54Q9H0W9 315 aaPredicted RBP6.9□□□□□ -1.3
SNRPA1-206ENST00000558059 C12orf4Q9NQ89 552 aa6.9□□□□□ -1.3
SNRPA1-206ENST00000558059 ZFP57Q9NU63 452 aa6.9□□□□□ -1.3
SNRPA1-206ENST00000558059 TXNL4BQ9NX01 149 aaKnown RBP6.9□□□□□ -1.3
SNRPA1-206ENST00000558059 PIPOXQ9P0Z9 390 aa6.9□□□□□ -1.3
SNRPA1-206ENST00000558059 OR1A1Q9P1Q5 309 aa6.9□□□□□ -1.3
SNRPA1-206ENST00000558059 MGAT4AQ9UM21 535 aa6.9□□□□□ -1.3
SNRPA1-206ENST00000558059 TRDCB7Z8K6 153 aa6.89□□□□□ -1.31
SNRPA1-206ENST00000558059 RAB29O14966 203 aa6.89□□□□□ -1.31
SNRPA1-206ENST00000558059 PROP1O75360 226 aa6.89□□□□□ -1.31
SNRPA1-206ENST00000558059 PF4P02776 101 aa6.89□□□□□ -1.31
SNRPA1-206ENST00000558059 SLC2A2P11168 524 aaPredicted RBP6.89□□□□□ -1.31
SNRPA1-206ENST00000558059 IGLL1P15814 213 aa6.89□□□□□ -1.31
SNRPA1-206ENST00000558059 CD33P20138 364 aa6.89□□□□□ -1.31
SNRPA1-206ENST00000558059 RAB6AP20340 208 aa6.89□□□□□ -1.31
SNRPA1-206ENST00000558059 SOX6P35712 828 aa6.89□□□□□ -1.31
SNRPA1-206ENST00000558059 CEACAM6P40199 344 aa6.89□□□□□ -1.31
SNRPA1-206ENST00000558059 SLC35B1P78383 322 aa6.89□□□□□ -1.31
SNRPA1-206ENST00000558059 CFHR3Q02985 330 aa6.89□□□□□ -1.31
SNRPA1-206ENST00000558059 MMDQ15546 238 aa6.89□□□□□ -1.31
SNRPA1-206ENST00000558059 PNLIPRP3Q17RR3 467 aa6.89□□□□□ -1.31
SNRPA1-206ENST00000558059 RPL39P5Q59GN2 51 aa6.89□□□□□ -1.31
SNRPA1-206ENST00000558059 TEX38Q6PEX7 206 aa6.89□□□□□ -1.31
SNRPA1-206ENST00000558059 ZNF773Q6PK81 442 aa6.89□□□□□ -1.31
SNRPA1-206ENST00000558059 COMMD1Q8N668 190 aa6.89□□□□□ -1.31
SNRPA1-206ENST00000558059 RNF152Q8N8N0 203 aa6.89□□□□□ -1.31
SNRPA1-206ENST00000558059 NPBQ8NG41 125 aa6.89□□□□□ -1.31
SNRPA1-206ENST00000558059 OR10R2Q8NGX6 335 aa6.89□□□□□ -1.31
SNRPA1-206ENST00000558059 FCGR1BQ92637 280 aa6.89□□□□□ -1.31
SNRPA1-206ENST00000558059 PTX4Q96A99 478 aa6.89□□□□□ -1.31
SNRPA1-206ENST00000558059 PHF21AQ96BD5 680 aa6.89□□□□□ -1.31
SNRPA1-206ENST00000558059 RAB3CQ96E17 227 aa6.89□□□□□ -1.31
SNRPA1-206ENST00000558059 ABHD14BQ96IU4 210 aa6.89□□□□□ -1.31
SNRPA1-206ENST00000558059 ZNF107Q9UII5 783 aaPredicted RBP6.89□□□□□ -1.31
SNRPA1-206ENST00000558059 STUB1Q9UNE7 303 aa6.89□□□□□ -1.31
SNRPA1-206ENST00000558059 SMIM30A4D0T7 59 aa6.88□□□□□ -1.31
SNRPA1-206ENST00000558059 NOTOA8MTQ0 251 aa6.88□□□□□ -1.31
SNRPA1-206ENST00000558059 H0YJW9 148 aa6.88□□□□□ -1.31
SNRPA1-206ENST00000558059 MFNGO00587 321 aa6.88□□□□□ -1.31
SNRPA1-206ENST00000558059 HSPA12AO43301 675 aa6.88□□□□□ -1.31
SNRPA1-206ENST00000558059 NDUFA3O95167 84 aa6.88□□□□□ -1.31
SNRPA1-206ENST00000558059 HLA-DRB1P01911 266 aa6.88□□□□□ -1.31
SNRPA1-206ENST00000558059 IGF1P05019 195 aa6.88□□□□□ -1.31
SNRPA1-206ENST00000558059 RPLP1P05386 114 aaKnown RBP6.88□□□□□ -1.31
SNRPA1-206ENST00000558059 CD3GP09693 182 aa6.88□□□□□ -1.31
SNRPA1-206ENST00000558059 GSTT2P0CG29 244 aa6.88□□□□□ -1.31
SNRPA1-206ENST00000558059 GSTT2BP0CG30 244 aa6.88□□□□□ -1.31
SNRPA1-206ENST00000558059 HIST1H1DP16402 221 aaKnown RBP6.88□□□□□ -1.31
SNRPA1-206ENST00000558059 GNB3P16520 340 aa6.88□□□□□ -1.31
SNRPA1-206ENST00000558059 ZBTB25P24278 435 aa6.88□□□□□ -1.31
SNRPA1-206ENST00000558059 THBS3P49746 956 aa6.88□□□□□ -1.31
SNRPA1-206ENST00000558059 FOXE3Q13461 319 aa6.88□□□□□ -1.31
SNRPA1-206ENST00000558059 C5orf64Q2M2E5 130 aa6.88□□□□□ -1.31
SNRPA1-206ENST00000558059 FAM131AQ6UXB0 335 aa6.88□□□□□ -1.31
SNRPA1-206ENST00000558059 GLDNQ6ZMI3 551 aaPredicted RBP6.88□□□□□ -1.31
SNRPA1-206ENST00000558059 LCNL1Q6ZST4 164 aa6.88□□□□□ -1.31
SNRPA1-206ENST00000558059 C8orf86Q6ZUL3 223 aa6.88□□□□□ -1.31
SNRPA1-206ENST00000558059 MRPL41Q8IXM3 137 aaKnown RBP6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 80.9 ms