RNA–Protein interactions for RNA: ENST00000557358.1

VPS33B-206, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 4

Gene VPS33B, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-206ENST00000557358 SCAND1P57086 179 aa11.02□□□□□ -0.65
VPS33B-206ENST00000557358 KRTAP10-3P60369 221 aa11.02□□□□□ -0.65
VPS33B-206ENST00000557358 DIAPH2-AS1Q14236 149 aa11.02□□□□□ -0.65
VPS33B-206ENST00000557358 GNMTQ14749 295 aa11.02□□□□□ -0.65
VPS33B-206ENST00000557358 FAM71F2Q6NXP2 309 aa11.02□□□□□ -0.65
VPS33B-206ENST00000557358 MZT2AQ6P582 158 aa11.02□□□□□ -0.65
VPS33B-206ENST00000557358 FOXRED2Q8IWF2 684 aa11.02□□□□□ -0.65
VPS33B-206ENST00000557358 MCFD2Q8NI22 146 aa11.02□□□□□ -0.65
VPS33B-206ENST00000557358 LGALS14Q8TCE9 139 aa11.02□□□□□ -0.65
VPS33B-206ENST00000557358 ST6GALNAC6Q969X2 333 aa11.02□□□□□ -0.65
VPS33B-206ENST00000557358 EAF1Q96JC9 268 aaPredicted RBP11.02□□□□□ -0.65
VPS33B-206ENST00000557358 RASL11BQ9BPW5 248 aa11.02□□□□□ -0.65
VPS33B-206ENST00000557358 GON7Q9BXV9 100 aa11.02□□□□□ -0.65
VPS33B-206ENST00000557358 NXF2Q9GZY0 626 aaKnown RBP11.02□□□□□ -0.65
VPS33B-206ENST00000557358 Q9N2K0 584 aa11.02□□□□□ -0.65
VPS33B-206ENST00000557358 NBEAL1Q6ZS30 2694 aa11.01□□□□□ -0.65
VPS33B-206ENST00000557358 A0A0B4J203 849 aa11.01□□□□□ -0.65
VPS33B-206ENST00000557358 TRDCB7Z8K6 153 aa11.01□□□□□ -0.65
VPS33B-206ENST00000557358 ITGB1BP1O14713 200 aa11.01□□□□□ -0.65
VPS33B-206ENST00000557358 KCNAB3O43448 404 aa11.01□□□□□ -0.65
VPS33B-206ENST00000557358 HIST1H1DP16402 221 aaKnown RBP11.01□□□□□ -0.65
VPS33B-206ENST00000557358 CEACAM6P40199 344 aa11.01□□□□□ -0.65
VPS33B-206ENST00000557358 ZNF134P52741 427 aa11.01□□□□□ -0.65
VPS33B-206ENST00000557358 TMEM50BP56557 158 aa11.01□□□□□ -0.65
VPS33B-206ENST00000557358 SLC35B1P78383 322 aa11.01□□□□□ -0.65
VPS33B-206ENST00000557358 NDUFA11Q86Y39 141 aa11.01□□□□□ -0.65
VPS33B-206ENST00000557358 OR4F17Q8NGA8 305 aa11.01□□□□□ -0.65
VPS33B-206ENST00000557358 OR5AU1Q8NGC0 362 aa11.01□□□□□ -0.65
VPS33B-206ENST00000557358 OR4A4PQ8NGN8 299 aa11.01□□□□□ -0.65
VPS33B-206ENST00000557358 CHPT1Q8WUD6 406 aa11.01□□□□□ -0.65
VPS33B-206ENST00000557358 OR4F4Q96R69 305 aa11.01□□□□□ -0.65
VPS33B-206ENST00000557358 HDHD3Q9BSH5 251 aaPredicted RBP11.01□□□□□ -0.65
VPS33B-206ENST00000557358 WNT10AQ9GZT5 417 aa11.01□□□□□ -0.65
VPS33B-206ENST00000557358 C6orf62Q9GZU0 229 aaPredicted RBP11.01□□□□□ -0.65
VPS33B-206ENST00000557358 ZNF221Q9UK13 617 aa11.01□□□□□ -0.65
VPS33B-206ENST00000557358 ETV7Q9Y603 341 aa11.01□□□□□ -0.65
VPS33B-206ENST00000557358 A3GALT2U3KPV4 340 aa11.01□□□□□ -0.65
VPS33B-206ENST00000557358 MGAM2Q2M2H8 2515 aa11.01□□□□□ -0.65
VPS33B-206ENST00000557358 GNB3P16520 340 aa11□□□□□ -0.65
VPS33B-206ENST00000557358 PITPNAQ00169 270 aa11□□□□□ -0.65
VPS33B-206ENST00000557358 LSAMPQ13449 338 aa11□□□□□ -0.65
VPS33B-206ENST00000557358 EBI3Q14213 229 aa11□□□□□ -0.65
VPS33B-206ENST00000557358 NSUN5P1Q3KNT7 163 aa11□□□□□ -0.65
VPS33B-206ENST00000557358 KHDC1LQ5JSQ8 128 aa11□□□□□ -0.65
VPS33B-206ENST00000557358 PLAC9Q5JTB6 97 aa11□□□□□ -0.65
VPS33B-206ENST00000557358 SLC35E3Q7Z769 313 aa11□□□□□ -0.65
VPS33B-206ENST00000557358 C5orf56Q8N8D9 126 aa11□□□□□ -0.65
VPS33B-206ENST00000557358 OR10J5Q8NHC4 309 aa11□□□□□ -0.65
VPS33B-206ENST00000557358 FAM110DQ8TAY7 271 aaPredicted RBP11□□□□□ -0.65
VPS33B-206ENST00000557358 ZNF251Q9BRH9 671 aa11□□□□□ -0.65
VPS33B-206ENST00000557358 LIN7CQ9NUP9 197 aaKnown RBP11□□□□□ -0.65
VPS33B-206ENST00000557358 KIAA1456Q9P272 454 aa11□□□□□ -0.65
VPS33B-206ENST00000557358 COMMD3Q9UBI1 195 aa11□□□□□ -0.65
VPS33B-206ENST00000557358 SPATA2Q9UM82 520 aa11□□□□□ -0.65
VPS33B-206ENST00000557358 RBM7Q9Y580 266 aaKnown RBP11□□□□□ -0.65
VPS33B-206ENST00000557358 TCRBV4S1A1TA0A5B7 111 aa10.99□□□□□ -0.65
VPS33B-206ENST00000557358 PSMB11A5LHX3 300 aa10.99□□□□□ -0.65
VPS33B-206ENST00000557358 FOXI3A8MTJ6 420 aaPredicted RBP10.99□□□□□ -0.65
VPS33B-206ENST00000557358 FABP7O15540 132 aa10.99□□□□□ -0.65
VPS33B-206ENST00000557358 DIRAS3O95661 229 aa10.99□□□□□ -0.65
VPS33B-206ENST00000557358 CD28P10747 220 aa10.99□□□□□ -0.65
VPS33B-206ENST00000557358 MC5RP33032 325 aa10.99□□□□□ -0.65
VPS33B-206ENST00000557358 TMEM95Q3KNT9 176 aa10.99□□□□□ -0.65
VPS33B-206ENST00000557358 FAM53AQ6NSI3 398 aaPredicted RBP10.99□□□□□ -0.65
VPS33B-206ENST00000557358 OR5H6Q8NGV6 325 aa10.99□□□□□ -0.65
VPS33B-206ENST00000557358 GINS4Q9BRT9 223 aa10.99□□□□□ -0.65
VPS33B-206ENST00000557358 SAA2-SAA4A0A096LPE2 208 aa10.98□□□□□ -0.65
VPS33B-206ENST00000557358 AP4M1O00189 453 aa10.98□□□□□ -0.65
VPS33B-206ENST00000557358 RAB27BO00194 218 aa10.98□□□□□ -0.65
VPS33B-206ENST00000557358 MFNGO00587 321 aa10.98□□□□□ -0.65
VPS33B-206ENST00000557358 BET1O15155 118 aa10.98□□□□□ -0.65
VPS33B-206ENST00000557358 ST8SIA5O15466 376 aa10.98□□□□□ -0.65
VPS33B-206ENST00000557358 RGS5O15539 181 aa10.98□□□□□ -0.65
VPS33B-206ENST00000557358 FCGR3AP08637 254 aa10.98□□□□□ -0.65
VPS33B-206ENST00000557358 GSTP1P09211 210 aaKnown RBP10.98□□□□□ -0.65
VPS33B-206ENST00000557358 SCTP09683 121 aa10.98□□□□□ -0.65
VPS33B-206ENST00000557358 SAA2P0DJI9 122 aaPredicted RBP10.98□□□□□ -0.65
VPS33B-206ENST00000557358 GPR12P47775 334 aa10.98□□□□□ -0.65
VPS33B-206ENST00000557358 GNG2P59768 71 aa10.98□□□□□ -0.65
VPS33B-206ENST00000557358 CBX3Q13185 183 aa10.98□□□□□ -0.65
VPS33B-206ENST00000557358 MMDQ15546 238 aa10.98□□□□□ -0.65
VPS33B-206ENST00000557358 UBE2NLQ5JXB2 153 aa10.98□□□□□ -0.65
VPS33B-206ENST00000557358 Q6ZS46 218 aa10.98□□□□□ -0.65
VPS33B-206ENST00000557358 ZNF833PQ6ZTB9 187 aa10.98□□□□□ -0.65
VPS33B-206ENST00000557358 COMMD1Q8N668 190 aa10.98□□□□□ -0.65
VPS33B-206ENST00000557358 SAMD12Q8N8I0 201 aa10.98□□□□□ -0.65
VPS33B-206ENST00000557358 R3HDM4Q96D70 268 aa10.98□□□□□ -0.65
VPS33B-206ENST00000557358 CITED2Q99967 270 aaPredicted RBP10.98□□□□□ -0.65
VPS33B-206ENST00000557358 MRPL20Q9BYC9 149 aaKnown RBP10.98□□□□□ -0.65
VPS33B-206ENST00000557358 DIABLOQ9NR28 239 aa10.98□□□□□ -0.65
VPS33B-206ENST00000557358 ADAM30Q9UKF2 790 aa10.98□□□□□ -0.65
VPS33B-206ENST00000557358 TSSC4Q9Y5U2 329 aaPredicted RBP10.98□□□□□ -0.65
VPS33B-206ENST00000557358 OR5H14A6NHG9 310 aa10.97□□□□□ -0.65
VPS33B-206ENST00000557358 SH2D7A6NKC9 451 aaPredicted RBP10.97□□□□□ -0.65
VPS33B-206ENST00000557358 H7C2Y5 167 aa10.97□□□□□ -0.65
VPS33B-206ENST00000557358 HPGDSO60760 199 aa10.97□□□□□ -0.65
VPS33B-206ENST00000557358 AMY1AP04745 511 aa10.97□□□□□ -0.65
VPS33B-206ENST00000557358 AMY2AP04746 511 aa10.97□□□□□ -0.65
VPS33B-206ENST00000557358 CTXN2P0C2S0 81 aa10.97□□□□□ -0.65
VPS33B-206ENST00000557358 PF4V1P10720 104 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms