RNA–Protein interactions for RNA: ENST00000557352.1

VRK1-207, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-207ENST00000557352 LINC01620Q4KN68 170 aa2.25□□□□□ -2.05
VRK1-207ENST00000557352 LIPNQ5VXI9 398 aa2.25□□□□□ -2.05
VRK1-207ENST00000557352 OR2A2Q6IF42 318 aa2.25□□□□□ -2.05
VRK1-207ENST00000557352 METAP1DQ6UB28 335 aaPredicted RBP2.25□□□□□ -2.05
VRK1-207ENST00000557352 TMEM91Q6ZNR0 172 aa2.25□□□□□ -2.05
VRK1-207ENST00000557352 SSX6Q7RTT6 188 aa2.25□□□□□ -2.05
VRK1-207ENST00000557352 LHFPL3Q86UP9 236 aa2.25□□□□□ -2.05
VRK1-207ENST00000557352 ZNF573Q86YE8 665 aa2.25□□□□□ -2.05
VRK1-207ENST00000557352 CDH26Q8IXH8 852 aa2.25□□□□□ -2.05
VRK1-207ENST00000557352 C1orf174Q8IYL3 243 aa2.25□□□□□ -2.05
VRK1-207ENST00000557352 KIR2DL5AQ8N109 375 aa2.25□□□□□ -2.05
VRK1-207ENST00000557352 LYPD1Q8N2G4 141 aa2.25□□□□□ -2.05
VRK1-207ENST00000557352 OR52H1Q8NGJ2 320 aa2.25□□□□□ -2.05
VRK1-207ENST00000557352 OR6Q1Q8NGQ2 317 aa2.25□□□□□ -2.05
VRK1-207ENST00000557352 OR6K6Q8NGW6 343 aa2.25□□□□□ -2.05
VRK1-207ENST00000557352 OR6N2Q8NGY6 317 aa2.25□□□□□ -2.05
VRK1-207ENST00000557352 OR2G2Q8NGZ5 317 aa2.25□□□□□ -2.05
VRK1-207ENST00000557352 DEDD2Q8WXF8 326 aa2.25□□□□□ -2.05
VRK1-207ENST00000557352 GHSRQ92847 366 aa2.25□□□□□ -2.05
VRK1-207ENST00000557352 RPL3LQ92901 407 aaKnown RBP2.25□□□□□ -2.05
VRK1-207ENST00000557352 BORCS5Q969J3 196 aa2.25□□□□□ -2.05
VRK1-207ENST00000557352 JSRP1Q96MG2 331 aaPredicted RBP2.25□□□□□ -2.05
VRK1-207ENST00000557352 SH3GL3Q99963 347 aa2.25□□□□□ -2.05
VRK1-207ENST00000557352 NAA50Q9GZZ1 169 aaKnown RBP2.25□□□□□ -2.05
VRK1-207ENST00000557352 HDHD2Q9H0R4 259 aa2.25□□□□□ -2.05
VRK1-207ENST00000557352 OR51E2Q9H255 320 aa2.25□□□□□ -2.05
VRK1-207ENST00000557352 RGCCQ9H4X1 137 aa2.25□□□□□ -2.05
VRK1-207ENST00000557352 EXO5Q9H790 373 aa2.25□□□□□ -2.05
VRK1-207ENST00000557352 HMG20AQ9NP66 347 aa2.25□□□□□ -2.05
VRK1-207ENST00000557352 POLE4Q9NR33 117 aa2.25□□□□□ -2.05
VRK1-207ENST00000557352 TMEM38BQ9NVV0 291 aa2.25□□□□□ -2.05
VRK1-207ENST00000557352 MED29Q9NX70 200 aa2.25□□□□□ -2.05
VRK1-207ENST00000557352 NUFIP1Q9UHK0 495 aaKnown RBP2.25□□□□□ -2.05
VRK1-207ENST00000557352 MRM2Q9UI43 246 aaKnown RBP2.25□□□□□ -2.05
VRK1-207ENST00000557352 FBXL3Q9UKT7 428 aa2.25□□□□□ -2.05
VRK1-207ENST00000557352 PEX16Q9Y5Y5 336 aa2.25□□□□□ -2.05
VRK1-207ENST00000557352 LHFPL6Q9Y693 200 aa2.25□□□□□ -2.05
VRK1-207ENST00000557352 R4GMQ9 66 aa2.25□□□□□ -2.05
VRK1-207ENST00000557352 IGSF10Q6WRI0 2623 aa2.25□□□□□ -2.05
VRK1-207ENST00000557352 WNK2Q9Y3S1 2297 aa2.25□□□□□ -2.05
VRK1-207ENST00000557352 ADGRG4Q8IZF6 3080 aa2.25□□□□□ -2.05
VRK1-207ENST00000557352 MYO18BQ8IUG5 2567 aa2.24□□□□□ -2.05
VRK1-207ENST00000557352 DOPEY1Q5JWR5 2465 aa2.24□□□□□ -2.05
VRK1-207ENST00000557352 YLPM1P49750 1951 aaKnown RBP2.24□□□□□ -2.05
VRK1-207ENST00000557352 A0A0A6YYH2 397 aa2.24□□□□□ -2.05
VRK1-207ENST00000557352 IGKV1D-43A0A0B4J1Z2 117 aa2.24□□□□□ -2.05
VRK1-207ENST00000557352 LOC100506127A0A0U1RQW1 187 aa2.24□□□□□ -2.05
VRK1-207ENST00000557352 ISPDA4D126 451 aa2.24□□□□□ -2.05
VRK1-207ENST00000557352 OR6C6A6NF89 314 aa2.24□□□□□ -2.05
VRK1-207ENST00000557352 TUBAL3A6NHL2 446 aa2.24□□□□□ -2.05
VRK1-207ENST00000557352 A6NJ64 397 aa2.24□□□□□ -2.05
VRK1-207ENST00000557352 SLC22A20A6NK97 555 aa2.24□□□□□ -2.05
VRK1-207ENST00000557352 CLDN25C9JDP6 229 aa2.24□□□□□ -2.05
VRK1-207ENST00000557352 LOC110117498-PIK3R3F6TDL0 507 aa2.24□□□□□ -2.05
VRK1-207ENST00000557352 H7C1C5 153 aa2.24□□□□□ -2.05
VRK1-207ENST00000557352 J3QLW9 94 aa2.24□□□□□ -2.05
VRK1-207ENST00000557352 AIPO00170 330 aa2.24□□□□□ -2.05
VRK1-207ENST00000557352 PDCD5O14737 125 aa2.24□□□□□ -2.05
VRK1-207ENST00000557352 CXCL13O43927 109 aa2.24□□□□□ -2.05
VRK1-207ENST00000557352 GMFGO60234 142 aa2.24□□□□□ -2.05
VRK1-207ENST00000557352 MRPL33O75394 65 aaKnown RBP2.24□□□□□ -2.05
VRK1-207ENST00000557352 TRAPPC6AO75865 159 aa2.24□□□□□ -2.05
VRK1-207ENST00000557352 FARS2O95363 451 aaKnown RBP2.24□□□□□ -2.05
VRK1-207ENST00000557352 HLA-DQB1P01920 261 aa2.24□□□□□ -2.05
VRK1-207ENST00000557352 ALDOBP05062 364 aa2.24□□□□□ -2.05
VRK1-207ENST00000557352 CD2P06729 351 aa2.24□□□□□ -2.05
VRK1-207ENST00000557352 MRPL3P09001 348 aaKnown RBP2.24□□□□□ -2.05
VRK1-207ENST00000557352 MMP7P09237 267 aaPredicted RBP2.24□□□□□ -2.05
VRK1-207ENST00000557352 OR8G3PP0DMU2 310 aa2.24□□□□□ -2.05
VRK1-207ENST00000557352 SFTPCP11686 197 aa2.24□□□□□ -2.05
VRK1-207ENST00000557352 PSKH1P11801 424 aa2.24□□□□□ -2.05
VRK1-207ENST00000557352 IGLL1P15814 213 aa2.24□□□□□ -2.05
VRK1-207ENST00000557352 IGFBP3P17936 291 aaPredicted RBP2.24□□□□□ -2.05
VRK1-207ENST00000557352 SRMP19623 302 aa2.24□□□□□ -2.05
VRK1-207ENST00000557352 COX5AP20674 150 aa2.24□□□□□ -2.05
VRK1-207ENST00000557352 CRYGSP22914 178 aa2.24□□□□□ -2.05
VRK1-207ENST00000557352 TUBG1P23258 451 aa2.24□□□□□ -2.05
VRK1-207ENST00000557352 MYL9P24844 172 aa2.24□□□□□ -2.05
VRK1-207ENST00000557352 AGTR1P30556 359 aa2.24□□□□□ -2.05
VRK1-207ENST00000557352 S100A5P33763 92 aa2.24□□□□□ -2.05
VRK1-207ENST00000557352 SDC2P34741 201 aa2.24□□□□□ -2.05
VRK1-207ENST00000557352 CD79BP40259 229 aa2.24□□□□□ -2.05
VRK1-207ENST00000557352 STARP49675 285 aa2.24□□□□□ -2.05
VRK1-207ENST00000557352 LCN6P62502 163 aa2.24□□□□□ -2.05
VRK1-207ENST00000557352 RPS25P62851 125 aaKnown RBP2.24□□□□□ -2.05
VRK1-207ENST00000557352 PPP3R1P63098 170 aa2.24□□□□□ -2.05
VRK1-207ENST00000557352 TGFBR3Q03167 851 aa2.24□□□□□ -2.05
VRK1-207ENST00000557352 FMODQ06828 376 aa2.24□□□□□ -2.05
VRK1-207ENST00000557352 SCRN3Q0VDG4 424 aa2.24□□□□□ -2.05
VRK1-207ENST00000557352 SRSF6Q13247 344 aaKnown RBP2.24□□□□□ -2.05
VRK1-207ENST00000557352 ENDOGQ14249 297 aaKnown RBP2.24□□□□□ -2.05
VRK1-207ENST00000557352 LAGE3Q14657 143 aa2.24□□□□□ -2.05
VRK1-207ENST00000557352 ZNF846Q147U1 533 aa2.24□□□□□ -2.05
VRK1-207ENST00000557352 DEFB109BQ30KR1 87 aa2.24□□□□□ -2.05
VRK1-207ENST00000557352 TP53I3Q53FA7 332 aa2.24□□□□□ -2.05
VRK1-207ENST00000557352 ACSM3Q53FZ2 586 aa2.24□□□□□ -2.05
VRK1-207ENST00000557352 SPANXN2Q5MJ10 180 aa2.24□□□□□ -2.05
VRK1-207ENST00000557352 TMEM244Q5VVB8 128 aa2.24□□□□□ -2.05
VRK1-207ENST00000557352 HACD4Q5VWC8 232 aa2.24□□□□□ -2.05
VRK1-207ENST00000557352 C22orf42Q6IC83 251 aa2.24□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 129.6 ms