RNA–Protein interactions for RNA: ENST00000556461.1

VTI1B-206, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-206ENST00000556461 FCGR1BQ92637 280 aa6.39□□□□□ -1.39
VTI1B-206ENST00000556461 RAB3CQ96E17 227 aa6.39□□□□□ -1.39
VTI1B-206ENST00000556461 AGMATQ9BSE5 352 aa6.39□□□□□ -1.39
VTI1B-206ENST00000556461 C11orf54Q9H0W9 315 aaPredicted RBP6.39□□□□□ -1.39
VTI1B-206ENST00000556461 ABCG5Q9H222 651 aa6.39□□□□□ -1.39
VTI1B-206ENST00000556461 RIMS4Q9H426 269 aaPredicted RBP6.39□□□□□ -1.39
VTI1B-206ENST00000556461 C12orf4Q9NQ89 552 aa6.39□□□□□ -1.39
VTI1B-206ENST00000556461 ABRACLQ9P1F3 81 aa6.39□□□□□ -1.39
VTI1B-206ENST00000556461 SLC23A1Q9UHI7 598 aa6.39□□□□□ -1.39
VTI1B-206ENST00000556461 ZNF230Q9UIE0 474 aaPredicted RBP6.39□□□□□ -1.39
VTI1B-206ENST00000556461 RNF150Q9ULK6 438 aa6.39□□□□□ -1.39
VTI1B-206ENST00000556461 DNAH9Q9NYC9 4486 aa6.39□□□□□ -1.39
VTI1B-206ENST00000556461 PLXNB1O43157 2135 aa6.38□□□□□ -1.39
VTI1B-206ENST00000556461 IGKV1D-8A0A087WSZ0 117 aa6.38□□□□□ -1.39
VTI1B-206ENST00000556461 NOTOA8MTQ0 251 aa6.38□□□□□ -1.39
VTI1B-206ENST00000556461 TRDCB7Z8K6 153 aa6.38□□□□□ -1.39
VTI1B-206ENST00000556461 TXNL1O43396 289 aa6.38□□□□□ -1.39
VTI1B-206ENST00000556461 RGS11O94810 467 aa6.38□□□□□ -1.39
VTI1B-206ENST00000556461 PRB2P02812 416 aaPredicted RBP6.38□□□□□ -1.39
VTI1B-206ENST00000556461 FCGR3AP08637 254 aa6.38□□□□□ -1.39
VTI1B-206ENST00000556461 GSTT2P0CG29 244 aa6.38□□□□□ -1.39
VTI1B-206ENST00000556461 GSTT2BP0CG30 244 aa6.38□□□□□ -1.39
VTI1B-206ENST00000556461 CT45A6P0DMU7 189 aa6.38□□□□□ -1.39
VTI1B-206ENST00000556461 CT45A5P0DMU8 189 aa6.38□□□□□ -1.39
VTI1B-206ENST00000556461 CT45A7P0DMV0 189 aa6.38□□□□□ -1.39
VTI1B-206ENST00000556461 HIST1H1DP16402 221 aaKnown RBP6.38□□□□□ -1.39
VTI1B-206ENST00000556461 RAB6AP20340 208 aa6.38□□□□□ -1.39
VTI1B-206ENST00000556461 SDC2P34741 201 aa6.38□□□□□ -1.39
VTI1B-206ENST00000556461 TGFBR1P36897 503 aa6.38□□□□□ -1.39
VTI1B-206ENST00000556461 ACTBP60709 375 aa6.38□□□□□ -1.39
VTI1B-206ENST00000556461 MXD1Q05195 221 aa6.38□□□□□ -1.39
VTI1B-206ENST00000556461 BEAN1Q3B7T3 259 aa6.38□□□□□ -1.39
VTI1B-206ENST00000556461 PDLIM3Q53GG5 364 aaPredicted RBP6.38□□□□□ -1.39
VTI1B-206ENST00000556461 OXLD1Q5BKU9 147 aa6.38□□□□□ -1.39
VTI1B-206ENST00000556461 KHDC1LQ5JSQ8 128 aa6.38□□□□□ -1.39
VTI1B-206ENST00000556461 SAMD5Q5TGI4 173 aa6.38□□□□□ -1.39
VTI1B-206ENST00000556461 FAM131AQ6UXB0 335 aa6.38□□□□□ -1.39
VTI1B-206ENST00000556461 STPG2Q8N412 459 aa6.38□□□□□ -1.39
VTI1B-206ENST00000556461 OR4F17Q8NGA8 305 aa6.38□□□□□ -1.39
VTI1B-206ENST00000556461 OR4X2Q8NGF9 303 aa6.38□□□□□ -1.39
VTI1B-206ENST00000556461 C5orf30Q96GV9 206 aa6.38□□□□□ -1.39
VTI1B-206ENST00000556461 OR4F4Q96R69 305 aa6.38□□□□□ -1.39
VTI1B-206ENST00000556461 CHCHD6Q9BRQ6 235 aa6.38□□□□□ -1.39
VTI1B-206ENST00000556461 CENPOQ9BU64 300 aa6.38□□□□□ -1.39
VTI1B-206ENST00000556461 LIN7CQ9NUP9 197 aaKnown RBP6.38□□□□□ -1.39
VTI1B-206ENST00000556461 SSR3Q9UNL2 185 aa6.38□□□□□ -1.39
VTI1B-206ENST00000556461 TSSC4Q9Y5U2 329 aaPredicted RBP6.38□□□□□ -1.39
VTI1B-206ENST00000556461 LOC100506127A0A0U1RQW1 187 aa6.37□□□□□ -1.39
VTI1B-206ENST00000556461 ITGB1BP1O14713 200 aa6.37□□□□□ -1.39
VTI1B-206ENST00000556461 FABP7O15540 132 aa6.37□□□□□ -1.39
VTI1B-206ENST00000556461 HSPA12AO43301 675 aa6.37□□□□□ -1.39
VTI1B-206ENST00000556461 CD36P16671 472 aa6.37□□□□□ -1.39
VTI1B-206ENST00000556461 ZBTB25P24278 435 aa6.37□□□□□ -1.39
VTI1B-206ENST00000556461 RPL23AP62750 156 aaKnown RBP6.37□□□□□ -1.39
VTI1B-206ENST00000556461 CFHR3Q02985 330 aa6.37□□□□□ -1.39
VTI1B-206ENST00000556461 IGSF11Q5DX21 431 aa6.37□□□□□ -1.39
VTI1B-206ENST00000556461 SFXN4Q6P4A7 337 aa6.37□□□□□ -1.39
VTI1B-206ENST00000556461 ETV3LQ6ZN32 361 aa6.37□□□□□ -1.39
VTI1B-206ENST00000556461 DRAXINQ8NBI3 349 aaPredicted RBP6.37□□□□□ -1.39
VTI1B-206ENST00000556461 OR5H6Q8NGV6 325 aa6.37□□□□□ -1.39
VTI1B-206ENST00000556461 LGALS14Q8TCE9 139 aa6.37□□□□□ -1.39
VTI1B-206ENST00000556461 PTX4Q96A99 478 aa6.37□□□□□ -1.39
VTI1B-206ENST00000556461 RASL11BQ9BPW5 248 aa6.37□□□□□ -1.39
VTI1B-206ENST00000556461 ATG5Q9H1Y0 275 aa6.37□□□□□ -1.39
VTI1B-206ENST00000556461 RDH8Q9NYR8 311 aa6.37□□□□□ -1.39
VTI1B-206ENST00000556461 ZNF107Q9UII5 783 aaPredicted RBP6.37□□□□□ -1.39
VTI1B-206ENST00000556461 DAPK2Q9UIK4 370 aa6.37□□□□□ -1.39
VTI1B-206ENST00000556461 G3V318 75 aa6.36□□□□□ -1.39
VTI1B-206ENST00000556461 H0YJW9 148 aa6.36□□□□□ -1.39
VTI1B-206ENST00000556461 AP4M1O00189 453 aa6.36□□□□□ -1.39
VTI1B-206ENST00000556461 FCN1O00602 326 aa6.36□□□□□ -1.39
VTI1B-206ENST00000556461 RAB29O14966 203 aa6.36□□□□□ -1.39
VTI1B-206ENST00000556461 BET1O15155 118 aa6.36□□□□□ -1.39
VTI1B-206ENST00000556461 RPLP1P05386 114 aaKnown RBP6.36□□□□□ -1.39
VTI1B-206ENST00000556461 PF4V1P10720 104 aa6.36□□□□□ -1.39
VTI1B-206ENST00000556461 IGLL1P15814 213 aa6.36□□□□□ -1.39
VTI1B-206ENST00000556461 SOX6P35712 828 aa6.36□□□□□ -1.39
VTI1B-206ENST00000556461 NDPQ00604 133 aa6.36□□□□□ -1.39
VTI1B-206ENST00000556461 MMDQ15546 238 aa6.36□□□□□ -1.39
VTI1B-206ENST00000556461 CDNFQ49AH0 187 aa6.36□□□□□ -1.39
VTI1B-206ENST00000556461 KPRPQ5T749 579 aaPredicted RBP6.36□□□□□ -1.39
VTI1B-206ENST00000556461 FAM71F2Q6NXP2 309 aa6.36□□□□□ -1.39
VTI1B-206ENST00000556461 C8orf86Q6ZUL3 223 aa6.36□□□□□ -1.39
VTI1B-206ENST00000556461 TPRA1Q86W33 373 aa6.36□□□□□ -1.39
VTI1B-206ENST00000556461 FOXRED2Q8IWF2 684 aa6.36□□□□□ -1.39
VTI1B-206ENST00000556461 ZNF383Q8NA42 475 aa6.36□□□□□ -1.39
VTI1B-206ENST00000556461 WFDC9Q8NEX5 89 aa6.36□□□□□ -1.39
VTI1B-206ENST00000556461 NPBQ8NG41 125 aa6.36□□□□□ -1.39
VTI1B-206ENST00000556461 OR8H1Q8NGG4 311 aa6.36□□□□□ -1.39
VTI1B-206ENST00000556461 OR4A4PQ8NGN8 299 aa6.36□□□□□ -1.39
VTI1B-206ENST00000556461 CHPT1Q8WUD6 406 aa6.36□□□□□ -1.39
VTI1B-206ENST00000556461 SLC25A38Q96DW6 304 aa6.36□□□□□ -1.39
VTI1B-206ENST00000556461 YIPF6Q96EC8 236 aa6.36□□□□□ -1.39
VTI1B-206ENST00000556461 KCTD7Q96MP8 289 aa6.36□□□□□ -1.39
VTI1B-206ENST00000556461 DUX3Q96PT4 197 aa6.36□□□□□ -1.39
VTI1B-206ENST00000556461 CABLES2Q9BTV7 478 aa6.36□□□□□ -1.39
VTI1B-206ENST00000556461 TOLLIPQ9H0E2 274 aa6.36□□□□□ -1.39
VTI1B-206ENST00000556461 PIPOXQ9P0Z9 390 aa6.36□□□□□ -1.39
VTI1B-206ENST00000556461 MGAT4AQ9UM21 535 aa6.36□□□□□ -1.39
VTI1B-206ENST00000556461 FBXO7Q9Y3I1 522 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms