RNA–Protein interactions for RNA: ENST00000556009.5

NPC2-208, Transcript of NPC intracellular cholesterol transporter 2, human

TSL 5

Gene NPC2, Length 699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NPC2-208	ENST00000556009	RPL5	P46777	297 aa	Known RBP	13.79	□□□□□ -0.2
NPC2-208	ENST00000556009	MMD	Q15546	238 aa		13.79	□□□□□ -0.2
NPC2-208	ENST00000556009	C22orf42	Q6IC83	251 aa		13.79	□□□□□ -0.2
NPC2-208	ENST00000556009	GPR141	Q7Z602	305 aa		13.79	□□□□□ -0.2
NPC2-208	ENST00000556009	ODF3L1	Q8IXM7	274 aa		13.79	□□□□□ -0.2
NPC2-208	ENST00000556009	ZNF491	Q8N8L2	437 aa		13.79	□□□□□ -0.2
NPC2-208	ENST00000556009	UQCC2	Q9BRT2	126 aa		13.79	□□□□□ -0.2
NPC2-208	ENST00000556009	OR51J1	Q9H342	316 aa		13.79	□□□□□ -0.2
NPC2-208	ENST00000556009	VSIG4	Q9Y279	399 aa		13.79	□□□□□ -0.2
NPC2-208	ENST00000556009	LOC100506127	A0A0U1RQW1	187 aa		13.78	□□□□□ -0.2
NPC2-208	ENST00000556009	UBE2QL1	A1L167	161 aa		13.78	□□□□□ -0.2
NPC2-208	ENST00000556009	YPEL1	O60688	119 aa		13.78	□□□□□ -0.2
NPC2-208	ENST00000556009	CRTAP	O75718	401 aa	Predicted RBP	13.78	□□□□□ -0.2
NPC2-208	ENST00000556009	MAS1	P04201	325 aa		13.78	□□□□□ -0.2
NPC2-208	ENST00000556009	SLC2A2	P11168	524 aa	Predicted RBP	13.78	□□□□□ -0.2
NPC2-208	ENST00000556009	SRM	P19623	302 aa		13.78	□□□□□ -0.2
NPC2-208	ENST00000556009	CALR	P27797	417 aa	Known RBP	13.78	□□□□□ -0.2
NPC2-208	ENST00000556009	FGF9	P31371	208 aa	Predicted RBP	13.78	□□□□□ -0.2
NPC2-208	ENST00000556009	ACTB	P60709	375 aa		13.78	□□□□□ -0.2
NPC2-208	ENST00000556009	TIMM50	Q3ZCQ8	353 aa		13.78	□□□□□ -0.2
NPC2-208	ENST00000556009	ZNF260	Q3ZCT1	412 aa		13.78	□□□□□ -0.2
NPC2-208	ENST00000556009	TMEM65	Q6PI78	240 aa		13.78	□□□□□ -0.2
NPC2-208	ENST00000556009	NKAIN3	Q8N8D7	197 aa		13.78	□□□□□ -0.2
NPC2-208	ENST00000556009	OR52L2P	Q8NGH6	319 aa		13.78	□□□□□ -0.2
NPC2-208	ENST00000556009	OR1N2	Q8NGR9	330 aa		13.78	□□□□□ -0.2
NPC2-208	ENST00000556009	YPEL2	Q96QA6	119 aa		13.78	□□□□□ -0.2
NPC2-208	ENST00000556009	NABP2	Q9BQ15	211 aa		13.78	□□□□□ -0.2
NPC2-208	ENST00000556009	ABHD14A	Q9BUJ0	271 aa		13.78	□□□□□ -0.2
NPC2-208	ENST00000556009	FUNDC2	Q9BWH2	189 aa		13.78	□□□□□ -0.2
NPC2-208	ENST00000556009	KLK15	Q9H2R5	256 aa		13.78	□□□□□ -0.2
NPC2-208	ENST00000556009	TXNL4B	Q9NX01	149 aa	Known RBP	13.78	□□□□□ -0.2
NPC2-208	ENST00000556009	ZNF256	Q9Y2P7	627 aa	Predicted RBP	13.78	□□□□□ -0.2
NPC2-208	ENST00000556009	HUWE1	Q7Z6Z7	4374 aa	Known RBP	13.78	□□□□□ -0.2
NPC2-208	ENST00000556009	PDCD6	O75340	191 aa		13.77	□□□□□ -0.21
NPC2-208	ENST00000556009	RGS11	O94810	467 aa		13.77	□□□□□ -0.21
NPC2-208	ENST00000556009	OR8U8	P0C7N1	319 aa		13.77	□□□□□ -0.21
NPC2-208	ENST00000556009	ZNF833P	Q6ZTB9	187 aa		13.77	□□□□□ -0.21
NPC2-208	ENST00000556009	LRRTM1	Q86UE6	522 aa		13.77	□□□□□ -0.21
NPC2-208	ENST00000556009	MINDY2	Q8NBR6	621 aa		13.77	□□□□□ -0.21
NPC2-208	ENST00000556009	NPB	Q8NG41	125 aa		13.77	□□□□□ -0.21
NPC2-208	ENST00000556009	MRPL30	Q8TCC3	161 aa	Known RBP	13.77	□□□□□ -0.21
NPC2-208	ENST00000556009	RITA1	Q96K30	269 aa		13.77	□□□□□ -0.21
NPC2-208	ENST00000556009	ZNF251	Q9BRH9	671 aa		13.77	□□□□□ -0.21
NPC2-208	ENST00000556009	WSB1	Q9Y6I7	421 aa		13.77	□□□□□ -0.21
NPC2-208	ENST00000556009	IGHV7-81	A0A0B4J1V7	117 aa		13.76	□□□□□ -0.21
NPC2-208	ENST00000556009		G3V318	75 aa		13.76	□□□□□ -0.21
NPC2-208	ENST00000556009	ATP6V0E1	O15342	81 aa		13.76	□□□□□ -0.21
NPC2-208	ENST00000556009	NBR2	O15453	112 aa		13.76	□□□□□ -0.21
NPC2-208	ENST00000556009	AIRE	O43918	545 aa		13.76	□□□□□ -0.21
NPC2-208	ENST00000556009	CHAT	P28329	748 aa		13.76	□□□□□ -0.21
NPC2-208	ENST00000556009	PPP1CC	P36873	323 aa	Known RBP	13.76	□□□□□ -0.21
NPC2-208	ENST00000556009	RAB9A	P51151	201 aa		13.76	□□□□□ -0.21
NPC2-208	ENST00000556009	ZNF616	Q08AN1	781 aa		13.76	□□□□□ -0.21
NPC2-208	ENST00000556009	GNMT	Q14749	295 aa		13.76	□□□□□ -0.21
NPC2-208	ENST00000556009	C5orf64	Q2M2E5	130 aa		13.76	□□□□□ -0.21
NPC2-208	ENST00000556009	ASPHD1	Q5U4P2	390 aa		13.76	□□□□□ -0.21
NPC2-208	ENST00000556009	GPR107	Q5VW38	600 aa		13.76	□□□□□ -0.21
NPC2-208	ENST00000556009	LIN54	Q6MZP7	749 aa		13.76	□□□□□ -0.21
NPC2-208	ENST00000556009	GALM	Q96C23	342 aa		13.76	□□□□□ -0.21
NPC2-208	ENST00000556009	CENPO	Q9BU64	300 aa		13.76	□□□□□ -0.21
NPC2-208	ENST00000556009	MRPL20	Q9BYC9	149 aa	Known RBP	13.76	□□□□□ -0.21
NPC2-208	ENST00000556009	CST11	Q9H112	138 aa		13.76	□□□□□ -0.21
NPC2-208	ENST00000556009	GNB4	Q9HAV0	340 aa		13.76	□□□□□ -0.21
NPC2-208	ENST00000556009	TRAV1-2	A0A0B4J238	106 aa		13.75	□□□□□ -0.21
NPC2-208	ENST00000556009	TRAV41	A0A0B4J266	112 aa		13.75	□□□□□ -0.21
NPC2-208	ENST00000556009	NDUFA3	O95167	84 aa		13.75	□□□□□ -0.21
NPC2-208	ENST00000556009	UBB	P0CG47	229 aa		13.75	□□□□□ -0.21
NPC2-208	ENST00000556009	MYL9	P24844	172 aa		13.75	□□□□□ -0.21
NPC2-208	ENST00000556009	CRIP2	P52943	208 aa	Predicted RBP	13.75	□□□□□ -0.21
NPC2-208	ENST00000556009	FAM71F2	Q6NXP2	309 aa		13.75	□□□□□ -0.21
NPC2-208	ENST00000556009	C5orf24	Q7Z6I8	188 aa		13.75	□□□□□ -0.21
NPC2-208	ENST00000556009	ANKRD13B	Q86YJ7	626 aa		13.75	□□□□□ -0.21
NPC2-208	ENST00000556009	CYYR1	Q96J86	154 aa		13.75	□□□□□ -0.21
NPC2-208	ENST00000556009	RNF167	Q9H6Y7	350 aa		13.75	□□□□□ -0.21
NPC2-208	ENST00000556009	SHISA3	A0PJX4	238 aa		13.74	□□□□□ -0.21
NPC2-208	ENST00000556009	C3orf84	H3BNL1	204 aa		13.74	□□□□□ -0.21
NPC2-208	ENST00000556009	CNTFR	P26992	372 aa		13.74	□□□□□ -0.21
NPC2-208	ENST00000556009	LSM3	P62310	102 aa	Known RBP	13.74	□□□□□ -0.21
NPC2-208	ENST00000556009	HMGN3	Q15651	99 aa		13.74	□□□□□ -0.21
NPC2-208	ENST00000556009	C19orf54	Q5BKX5	351 aa		13.74	□□□□□ -0.21
NPC2-208	ENST00000556009	ZNF429	Q86V71	674 aa		13.74	□□□□□ -0.21
NPC2-208	ENST00000556009	NAA50	Q9GZZ1	169 aa	Known RBP	13.74	□□□□□ -0.21
NPC2-208	ENST00000556009	PARP11	Q9NR21	331 aa		13.74	□□□□□ -0.21
NPC2-208	ENST00000556009	SAA2-SAA4	A0A096LPE2	208 aa		13.73	□□□□□ -0.21
NPC2-208	ENST00000556009	SAA2	P0DJI9	122 aa	Predicted RBP	13.73	□□□□□ -0.21
NPC2-208	ENST00000556009	BLVRB	P30043	206 aa	Predicted RBP	13.73	□□□□□ -0.21
NPC2-208	ENST00000556009	OR3A3	P47888	321 aa		13.73	□□□□□ -0.21
NPC2-208	ENST00000556009	GNB1	P62873	340 aa		13.73	□□□□□ -0.21
NPC2-208	ENST00000556009	ZNF660	Q6AZW8	331 aa	Predicted RBP	13.73	□□□□□ -0.21
NPC2-208	ENST00000556009	OR2AK2	Q8NG84	335 aa		13.73	□□□□□ -0.21
NPC2-208	ENST00000556009	FAM46B	Q96A09	425 aa		13.73	□□□□□ -0.21
NPC2-208	ENST00000556009	NEDD4L	Q96PU5	975 aa		13.73	□□□□□ -0.21
NPC2-208	ENST00000556009	ASCL2	Q99929	193 aa		13.73	□□□□□ -0.21
NPC2-208	ENST00000556009	SULT4A1	Q9BR01	284 aa		13.73	□□□□□ -0.21
NPC2-208	ENST00000556009	GHITM	Q9H3K2	345 aa		13.73	□□□□□ -0.21
NPC2-208	ENST00000556009	KIAA1456	Q9P272	454 aa		13.73	□□□□□ -0.21
NPC2-208	ENST00000556009	AK6	Q9Y3D8	172 aa	Known RBP	13.73	□□□□□ -0.21
NPC2-208	ENST00000556009	SMAD5-AS1	Q9Y6J3	95 aa		13.73	□□□□□ -0.21
NPC2-208	ENST00000556009	PDCD5	O14737	125 aa		13.72	□□□□□ -0.21
NPC2-208	ENST00000556009	GABARAP	O95166	117 aa		13.72	□□□□□ -0.21

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