RNA–Protein interactions for RNA: ENST00000554180.5

TDP1-209, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 910 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-209ENST00000554180 SRPXP78539 464 aa6.27□□□□□ -1.41
TDP1-209ENST00000554180 LOXL1Q08397 574 aaPredicted RBP6.27□□□□□ -1.41
TDP1-209ENST00000554180 CBX3Q13185 183 aa6.27□□□□□ -1.41
TDP1-209ENST00000554180 LTC4SQ16873 150 aa6.27□□□□□ -1.41
TDP1-209ENST00000554180 HIST2H2BCQ6DN03 193 aa6.27□□□□□ -1.41
TDP1-209ENST00000554180 BTNL3Q6UXE8 466 aa6.27□□□□□ -1.41
TDP1-209ENST00000554180 DRAM1Q8N682 238 aa6.27□□□□□ -1.41
TDP1-209ENST00000554180 TCTEX1D1Q8N7M0 179 aa6.27□□□□□ -1.41
TDP1-209ENST00000554180 OR9G1Q8NH87 305 aa6.27□□□□□ -1.41
TDP1-209ENST00000554180 MITD1Q8WV92 249 aa6.27□□□□□ -1.41
TDP1-209ENST00000554180 CAPSLQ8WWF8 208 aa6.27□□□□□ -1.41
TDP1-209ENST00000554180 PHB2Q99623 299 aa6.27□□□□□ -1.41
TDP1-209ENST00000554180 SUCNR1Q9BXA5 334 aa6.27□□□□□ -1.41
TDP1-209ENST00000554180 TMEM133Q9H2Q1 129 aa6.27□□□□□ -1.41
TDP1-209ENST00000554180 IFI27L2Q9H2X8 130 aa6.27□□□□□ -1.41
TDP1-209ENST00000554180 NAA60Q9H7X0 242 aa6.27□□□□□ -1.41
TDP1-209ENST00000554180 CCL28Q9NRJ3 127 aa6.27□□□□□ -1.41
TDP1-209ENST00000554180 FAM212BQ9NTI7 297 aaPredicted RBP6.27□□□□□ -1.41
TDP1-209ENST00000554180 LIN7CQ9NUP9 197 aaKnown RBP6.27□□□□□ -1.41
TDP1-209ENST00000554180 PIPOXQ9P0Z9 390 aa6.27□□□□□ -1.41
TDP1-209ENST00000554180 ONECUT1Q9UBC0 465 aa6.27□□□□□ -1.41
TDP1-209ENST00000554180 SHPKQ9UHJ6 478 aa6.27□□□□□ -1.41
TDP1-209ENST00000554180 KCNS2Q9ULS6 477 aa6.27□□□□□ -1.41
TDP1-209ENST00000554180 PSG11Q9UQ72 335 aa6.27□□□□□ -1.41
TDP1-209ENST00000554180 KCNIP3Q9Y2W7 256 aa6.27□□□□□ -1.41
TDP1-209ENST00000554180 MED13LQ71F56 2210 aa6.27□□□□□ -1.41
TDP1-209ENST00000554180 DOCK11Q5JSL3 2073 aa6.27□□□□□ -1.41
TDP1-209ENST00000554180 TEX13DA0A0J9YY54 714 aaPredicted RBP6.26□□□□□ -1.41
TDP1-209ENST00000554180 B4DSR2 109 aa6.26□□□□□ -1.41
TDP1-209ENST00000554180 H0Y980 276 aa6.26□□□□□ -1.41
TDP1-209ENST00000554180 HSD17B6O14756 317 aa6.26□□□□□ -1.41
TDP1-209ENST00000554180 RAB29O14966 203 aa6.26□□□□□ -1.41
TDP1-209ENST00000554180 MPPED1O15442 326 aa6.26□□□□□ -1.41
TDP1-209ENST00000554180 ST8SIA5O15466 376 aa6.26□□□□□ -1.41
TDP1-209ENST00000554180 SSNA1O43805 119 aa6.26□□□□□ -1.41
TDP1-209ENST00000554180 PGLYRP1O75594 196 aaPredicted RBP6.26□□□□□ -1.41
TDP1-209ENST00000554180 SFT2D2O95562 160 aa6.26□□□□□ -1.41
TDP1-209ENST00000554180 IFNA2P01563 188 aa6.26□□□□□ -1.41
TDP1-209ENST00000554180 IGLV2-14P01704 120 aa6.26□□□□□ -1.41
TDP1-209ENST00000554180 GATA3P23771 443 aa6.26□□□□□ -1.41
TDP1-209ENST00000554180 PRTN3P24158 256 aa6.26□□□□□ -1.41
TDP1-209ENST00000554180 F2RP25116 425 aa6.26□□□□□ -1.41
TDP1-209ENST00000554180 GPR12P47775 334 aa6.26□□□□□ -1.41
TDP1-209ENST00000554180 ZNF134P52741 427 aa6.26□□□□□ -1.41
TDP1-209ENST00000554180 ZNF137PP52743 207 aa6.26□□□□□ -1.41
TDP1-209ENST00000554180 RRAS2P62070 204 aaPredicted RBP6.26□□□□□ -1.41
TDP1-209ENST00000554180 SUPT4H1P63272 117 aaKnown RBP6.26□□□□□ -1.41
TDP1-209ENST00000554180 LCN2P80188 198 aa6.26□□□□□ -1.41
TDP1-209ENST00000554180 CATR1Q13166 79 aa6.26□□□□□ -1.41
TDP1-209ENST00000554180 PHLDA2Q53GA4 152 aa6.26□□□□□ -1.41
TDP1-209ENST00000554180 CT45A1Q5HYN5 189 aa6.26□□□□□ -1.41
TDP1-209ENST00000554180 FAM71F2Q6NXP2 309 aa6.26□□□□□ -1.41
TDP1-209ENST00000554180 ZNF66Q6ZN08 573 aa6.26□□□□□ -1.41
TDP1-209ENST00000554180 TBC1D26Q86UD7 250 aa6.26□□□□□ -1.41
TDP1-209ENST00000554180 C12orf45Q8N5I9 185 aaPredicted RBP6.26□□□□□ -1.41
TDP1-209ENST00000554180 BEND2Q8NDZ0 799 aa6.26□□□□□ -1.41
TDP1-209ENST00000554180 OR13D1Q8NGV5 346 aa6.26□□□□□ -1.41
TDP1-209ENST00000554180 CT45A3Q8NHU0 189 aa6.26□□□□□ -1.41
TDP1-209ENST00000554180 COQ8AQ8NI60 647 aa6.26□□□□□ -1.41
TDP1-209ENST00000554180 HSD17B10Q99714 261 aaKnown RBP6.26□□□□□ -1.41
TDP1-209ENST00000554180 FOXC2Q99958 501 aa6.26□□□□□ -1.41
TDP1-209ENST00000554180 SEC22CQ9BRL7 303 aa6.26□□□□□ -1.41
TDP1-209ENST00000554180 CLEC7AQ9BXN2 247 aa6.26□□□□□ -1.41
TDP1-209ENST00000554180 BEX2Q9BXY8 128 aa6.26□□□□□ -1.41
TDP1-209ENST00000554180 TMEM222Q9H0R3 208 aa6.26□□□□□ -1.41
TDP1-209ENST00000554180 MED28Q9H204 178 aa6.26□□□□□ -1.41
TDP1-209ENST00000554180 HEXA-AS1Q9H8Q6 139 aa6.26□□□□□ -1.41
TDP1-209ENST00000554180 BEX1Q9HBH7 125 aa6.26□□□□□ -1.41
TDP1-209ENST00000554180 SDHAF2Q9NX18 166 aa6.26□□□□□ -1.41
TDP1-209ENST00000554180 NBPF19A0A087WUL8 3843 aa6.25□□□□□ -1.41
TDP1-209ENST00000554180 FLNBO75369 2602 aaKnown RBP6.25□□□□□ -1.41
TDP1-209ENST00000554180 SAA2-SAA4A0A096LPE2 208 aa6.25□□□□□ -1.41
TDP1-209ENST00000554180 IGHV2-26A0A0B4J1V2 119 aa6.25□□□□□ -1.41
TDP1-209ENST00000554180 TRAV20A0A0B4J274 112 aa6.25□□□□□ -1.41
TDP1-209ENST00000554180 C3orf85A0A1B0GTC6 90 aa6.25□□□□□ -1.41
TDP1-209ENST00000554180 HMX3A6NHT5 357 aa6.25□□□□□ -1.41
TDP1-209ENST00000554180 FAM157AC9JC47 383 aa6.25□□□□□ -1.41
TDP1-209ENST00000554180 J3QR06 171 aa6.25□□□□□ -1.41
TDP1-209ENST00000554180 TOR1AO14656 332 aa6.25□□□□□ -1.41
TDP1-209ENST00000554180 SLC31A2O15432 143 aa6.25□□□□□ -1.41
TDP1-209ENST00000554180 IGLV1-47P01700 117 aa6.25□□□□□ -1.41
TDP1-209ENST00000554180 MSMBP08118 114 aa6.25□□□□□ -1.41
TDP1-209ENST00000554180 SAA2P0DJI9 122 aaPredicted RBP6.25□□□□□ -1.41
TDP1-209ENST00000554180 RPA2P15927 270 aa6.25□□□□□ -1.41
TDP1-209ENST00000554180 UCP1P25874 307 aa6.25□□□□□ -1.41
TDP1-209ENST00000554180 IL3RAP26951 378 aa6.25□□□□□ -1.41
TDP1-209ENST00000554180 KIR2DS2P43631 304 aa6.25□□□□□ -1.41
TDP1-209ENST00000554180 GNG10P50151 68 aa6.25□□□□□ -1.41
TDP1-209ENST00000554180 DVL1P1P54792 670 aaPredicted RBP6.25□□□□□ -1.41
TDP1-209ENST00000554180 PRRX1P54821 245 aa6.25□□□□□ -1.41
TDP1-209ENST00000554180 ARF6P62330 175 aa6.25□□□□□ -1.41
TDP1-209ENST00000554180 EIF4EBP1Q13541 118 aaPredicted RBP6.25□□□□□ -1.41
TDP1-209ENST00000554180 HLA-DRB5Q30154 266 aa6.25□□□□□ -1.41
TDP1-209ENST00000554180 NCR3LG1Q68D85 454 aa6.25□□□□□ -1.41
TDP1-209ENST00000554180 FAM53AQ6NSI3 398 aaPredicted RBP6.25□□□□□ -1.41
TDP1-209ENST00000554180 KRTAP1-3Q8IUG1 177 aa6.25□□□□□ -1.41
TDP1-209ENST00000554180 ABHD12Q8N2K0 398 aa6.25□□□□□ -1.41
TDP1-209ENST00000554180 Q8N7P7 452 aa6.25□□□□□ -1.41
TDP1-209ENST00000554180 LRTM2Q8N967 370 aa6.25□□□□□ -1.41
TDP1-209ENST00000554180 OR11H6Q8NGC7 330 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms