RNA–Protein interactions for RNA: ENST00000553888.5

VIPAS39-206, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VIPAS39, Length 2,934 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-206ENST00000553888 IGSF10Q6WRI0 2623 aa10.6□□□□□ -0.71
VIPAS39-206ENST00000553888 F5H0A9 414 aaPredicted RBP10.6□□□□□ -0.71
VIPAS39-206ENST00000553888 K7EPK0 472 aa10.6□□□□□ -0.71
VIPAS39-206ENST00000553888 K7N7A8 449 aa10.6□□□□□ -0.71
VIPAS39-206ENST00000553888 CDS2O95674 445 aa10.6□□□□□ -0.71
VIPAS39-206ENST00000553888 EPHA1P21709 976 aa10.6□□□□□ -0.71
VIPAS39-206ENST00000553888 UCP1P25874 307 aa10.6□□□□□ -0.71
VIPAS39-206ENST00000553888 STUMQ69YW2 141 aa10.6□□□□□ -0.71
VIPAS39-206ENST00000553888 FAM71E2Q8N5Q1 922 aa10.6□□□□□ -0.71
VIPAS39-206ENST00000553888 SNX22Q96L94 193 aa10.6□□□□□ -0.71
VIPAS39-206ENST00000553888 CXorf58Q96LI9 332 aa10.6□□□□□ -0.71
VIPAS39-206ENST00000553888 TMEM56Q96MV1 263 aa10.6□□□□□ -0.71
VIPAS39-206ENST00000553888 GAFA1Q96PS6 74 aa10.6□□□□□ -0.71
VIPAS39-206ENST00000553888 MAGT1Q9H0U3 335 aa10.6□□□□□ -0.71
VIPAS39-206ENST00000553888 ZC4H2Q9NQZ6 224 aa10.6□□□□□ -0.71
VIPAS39-206ENST00000553888 TMEM56-RWDD3S4R434 201 aa10.6□□□□□ -0.71
VIPAS39-206ENST00000553888 DEDDO75618 318 aa10.59□□□□□ -0.71
VIPAS39-206ENST00000553888 IGKV1-39P01597 117 aa10.59□□□□□ -0.71
VIPAS39-206ENST00000553888 IGKV1D-39P04432 117 aa10.59□□□□□ -0.71
VIPAS39-206ENST00000553888 LYL1P12980 280 aa10.59□□□□□ -0.71
VIPAS39-206ENST00000553888 ERVFRD-1P60508 538 aa10.59□□□□□ -0.71
VIPAS39-206ENST00000553888 MST1LQ2TV78 715 aa10.59□□□□□ -0.71
VIPAS39-206ENST00000553888 FAM222BQ8WU58 562 aa10.59□□□□□ -0.71
VIPAS39-206ENST00000553888 CCL17Q92583 94 aa10.59□□□□□ -0.71
VIPAS39-206ENST00000553888 SAP30LQ9HAJ7 183 aa10.59□□□□□ -0.71
VIPAS39-206ENST00000553888 H0Y980 276 aa10.59□□□□□ -0.71
VIPAS39-206ENST00000553888 MGST3O14880 152 aa10.59□□□□□ -0.71
VIPAS39-206ENST00000553888 SCAF4O95104 1147 aaKnown RBP10.59□□□□□ -0.71
VIPAS39-206ENST00000553888 CD3EP07766 207 aa10.59□□□□□ -0.71
VIPAS39-206ENST00000553888 HKR1P10072 659 aa10.59□□□□□ -0.71
VIPAS39-206ENST00000553888 RPL30P62888 115 aaKnown RBP10.59□□□□□ -0.71
VIPAS39-206ENST00000553888 SMIM3Q9BZL3 60 aa10.59□□□□□ -0.71
VIPAS39-206ENST00000553888 NGBQ9NPG2 151 aa10.59□□□□□ -0.71
VIPAS39-206ENST00000553888 FCN3O75636 299 aa10.58□□□□□ -0.72
VIPAS39-206ENST00000553888 ZNF674Q2M3X9 581 aa10.58□□□□□ -0.72
VIPAS39-206ENST00000553888 CXorf66Q5JRM2 361 aaPredicted RBP10.58□□□□□ -0.72
VIPAS39-206ENST00000553888 DYNLRB1Q9NP97 96 aa10.58□□□□□ -0.72
VIPAS39-206ENST00000553888 CYTL1Q9NRR1 136 aa10.58□□□□□ -0.72
VIPAS39-206ENST00000553888 PSG11Q9UQ72 335 aa10.58□□□□□ -0.72
VIPAS39-206ENST00000553888 CACNA1BQ00975 2339 aa10.58□□□□□ -0.72
VIPAS39-206ENST00000553888 A0A1W2PPE3 182 aa10.58□□□□□ -0.72
VIPAS39-206ENST00000553888 LYNX1G3V0Z9 82 aa10.58□□□□□ -0.72
VIPAS39-206ENST00000553888 GATCO43716 136 aaKnown RBP10.58□□□□□ -0.72
VIPAS39-206ENST00000553888 RAMP3O60896 148 aa10.58□□□□□ -0.72
VIPAS39-206ENST00000553888 LYNX1P0DP58 116 aa10.58□□□□□ -0.72
VIPAS39-206ENST00000553888 OR4D5Q8NGN0 318 aa10.58□□□□□ -0.72
VIPAS39-206ENST00000553888 RBPMSQ93062 196 aaKnown RBP10.58□□□□□ -0.72
VIPAS39-206ENST00000553888 LURAP1Q96LR2 239 aa10.58□□□□□ -0.72
VIPAS39-206ENST00000553888 GSX2Q9BZM3 304 aa10.58□□□□□ -0.72
VIPAS39-206ENST00000553888 NDRG3Q9UGV2 375 aa10.58□□□□□ -0.72
VIPAS39-206ENST00000553888 RCL1Q9Y2P8 373 aaKnown RBP10.58□□□□□ -0.72
VIPAS39-206ENST00000553888 TMED3Q9Y3Q3 217 aa10.58□□□□□ -0.72
VIPAS39-206ENST00000553888 TMPRSS2O15393 492 aa10.57□□□□□ -0.72
VIPAS39-206ENST00000553888 CIDEAO60543 219 aa10.57□□□□□ -0.72
VIPAS39-206ENST00000553888 IRF2P14316 349 aa10.57□□□□□ -0.72
VIPAS39-206ENST00000553888 FBXL19-AS1Q494R0 122 aa10.57□□□□□ -0.72
VIPAS39-206ENST00000553888 ZNF585BQ52M93 769 aa10.57□□□□□ -0.72
VIPAS39-206ENST00000553888 NMSQ5H8A3 153 aa10.57□□□□□ -0.72
VIPAS39-206ENST00000553888 TCF23Q7RTU1 214 aa10.57□□□□□ -0.72
VIPAS39-206ENST00000553888 OR5D13Q8NGL4 314 aa10.57□□□□□ -0.72
VIPAS39-206ENST00000553888 Q8TCH9 128 aa10.57□□□□□ -0.72
VIPAS39-206ENST00000553888 NINJ1Q92982 152 aa10.57□□□□□ -0.72
VIPAS39-206ENST00000553888 CISD1Q9NZ45 108 aaKnown RBP10.57□□□□□ -0.72
VIPAS39-206ENST00000553888 RNF24Q9Y225 148 aa10.57□□□□□ -0.72
VIPAS39-206ENST00000553888 TUBAL3A6NHL2 446 aa10.57□□□□□ -0.72
VIPAS39-206ENST00000553888 LEUTXA8MZ59 168 aa10.57□□□□□ -0.72
VIPAS39-206ENST00000553888 SCO1O75880 301 aa10.57□□□□□ -0.72
VIPAS39-206ENST00000553888 CLLU1Q5K131 121 aa10.57□□□□□ -0.72
VIPAS39-206ENST00000553888 Q6ZRM9 215 aa10.57□□□□□ -0.72
VIPAS39-206ENST00000553888 ERGIC1Q969X5 290 aa10.57□□□□□ -0.72
VIPAS39-206ENST00000553888 C12orf57Q99622 126 aa10.57□□□□□ -0.72
VIPAS39-206ENST00000553888 ASH1LQ9NR48 2969 aaKnown RBP10.57□□□□□ -0.72
VIPAS39-206ENST00000553888 SLC31A2O15432 143 aa10.57□□□□□ -0.72
VIPAS39-206ENST00000553888 SERPINE2P07093 398 aa10.57□□□□□ -0.72
VIPAS39-206ENST00000553888 NMBP08949 121 aa10.57□□□□□ -0.72
VIPAS39-206ENST00000553888 TNFRSF1AP19438 455 aa10.57□□□□□ -0.72
VIPAS39-206ENST00000553888 DMBX1Q8NFW5 382 aa10.57□□□□□ -0.72
VIPAS39-206ENST00000553888 SCARB1Q8WTV0 552 aa10.57□□□□□ -0.72
VIPAS39-206ENST00000553888 AQP10Q96PS8 301 aa10.57□□□□□ -0.72
VIPAS39-206ENST00000553888 GAB2Q9UQC2 676 aa10.57□□□□□ -0.72
VIPAS39-206ENST00000553888 AKAP6Q13023 2319 aa10.56□□□□□ -0.72
VIPAS39-206ENST00000553888 TSPAN4O14817 238 aa10.56□□□□□ -0.72
VIPAS39-206ENST00000553888 SPINT2O43291 252 aa10.56□□□□□ -0.72
VIPAS39-206ENST00000553888 CD55P08174 381 aa10.56□□□□□ -0.72
VIPAS39-206ENST00000553888 PET100P0DJ07 73 aa10.56□□□□□ -0.72
VIPAS39-206ENST00000553888 PF4V1P10720 104 aa10.56□□□□□ -0.72
VIPAS39-206ENST00000553888 RPL12P30050 165 aaKnown RBP10.56□□□□□ -0.72
VIPAS39-206ENST00000553888 ZNF134P52741 427 aa10.56□□□□□ -0.72
VIPAS39-206ENST00000553888 LYPD2Q6UXB3 125 aa10.56□□□□□ -0.72
VIPAS39-206ENST00000553888 ZNF788Q6ZQV5 615 aa10.56□□□□□ -0.72
VIPAS39-206ENST00000553888 ZNF561Q8N587 486 aa10.56□□□□□ -0.72
VIPAS39-206ENST00000553888 ZNF645Q8N7E2 425 aa10.56□□□□□ -0.72
VIPAS39-206ENST00000553888 DTD1Q8TEA8 209 aa10.56□□□□□ -0.72
VIPAS39-206ENST00000553888 GPR146Q96CH1 333 aa10.56□□□□□ -0.72
VIPAS39-206ENST00000553888 SDSLQ96GA7 329 aa10.56□□□□□ -0.72
VIPAS39-206ENST00000553888 KCNJ16Q9NPI9 418 aa10.56□□□□□ -0.72
VIPAS39-206ENST00000553888 GNG12Q9UBI6 72 aa10.56□□□□□ -0.72
VIPAS39-206ENST00000553888 RNF115Q9Y4L5 304 aa10.56□□□□□ -0.72
VIPAS39-206ENST00000553888 TOR1AO14656 332 aa10.56□□□□□ -0.72
VIPAS39-206ENST00000553888 ZG16O60844 167 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms