RNA–Protein interactions for RNA: ENST00000553569.1

TDP1-206, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 879 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-206ENST00000553569 S100A16Q96FQ6 103 aaKnown RBP18.23■□□□□ 0.51
TDP1-206ENST00000553569 ABHD14BQ96IU4 210 aa18.23■□□□□ 0.51
TDP1-206ENST00000553569 MRPL20Q9BYC9 149 aaKnown RBP18.23■□□□□ 0.51
TDP1-206ENST00000553569 PRSS22Q9GZN4 317 aa18.23■□□□□ 0.51
TDP1-206ENST00000553569 C11orf54Q9H0W9 315 aaPredicted RBP18.23■□□□□ 0.51
TDP1-206ENST00000553569 SCOCQ9UIL1 159 aa18.23■□□□□ 0.51
TDP1-206ENST00000553569 ZNF736B4DX44 427 aaPredicted RBP18.22■□□□□ 0.51
TDP1-206ENST00000553569 PTHLHP12272 177 aa18.22■□□□□ 0.51
TDP1-206ENST00000553569 PROK1P58294 105 aa18.22■□□□□ 0.51
TDP1-206ENST00000553569 SRSF4Q08170 494 aaKnown RBP18.22■□□□□ 0.51
TDP1-206ENST00000553569 SRSF7Q16629 238 aaKnown RBP eCLIP18.22■□□□□ 0.51
TDP1-206ENST00000553569 OR10J5Q8NHC4 309 aa18.22■□□□□ 0.51
TDP1-206ENST00000553569 RBMXL1Q96E39 390 aaKnown RBP18.22■□□□□ 0.51
TDP1-206ENST00000553569 GINS4Q9BRT9 223 aa18.22■□□□□ 0.51
TDP1-206ENST00000553569 AUNIPQ9H7T9 357 aa18.22■□□□□ 0.51
TDP1-206ENST00000553569 MOB4Q9Y3A3 225 aa18.22■□□□□ 0.51
TDP1-206ENST00000553569 TENM1Q9UKZ4 2725 aa18.22■□□□□ 0.51
TDP1-206ENST00000553569 SH2D7A6NKC9 451 aaPredicted RBP18.21■□□□□ 0.51
TDP1-206ENST00000553569 ITGB1BP1O14713 200 aa18.21■□□□□ 0.51
TDP1-206ENST00000553569 XRCC3O43542 346 aa18.21■□□□□ 0.51
TDP1-206ENST00000553569 EIF4EP06730 217 aaKnown RBP18.21■□□□□ 0.51
TDP1-206ENST00000553569 LSAMPQ13449 338 aa18.21■□□□□ 0.51
TDP1-206ENST00000553569 RPL39P5Q59GN2 51 aa18.21■□□□□ 0.51
TDP1-206ENST00000553569 TMEM69Q5SWH9 247 aa18.21■□□□□ 0.51
TDP1-206ENST00000553569 SHISA2Q6UWI4 295 aa18.21■□□□□ 0.51
TDP1-206ENST00000553569 Q6ZS46 218 aa18.21■□□□□ 0.51
TDP1-206ENST00000553569 Q6ZS49 121 aa18.21■□□□□ 0.51
TDP1-206ENST00000553569 ZNF833PQ6ZTB9 187 aa18.21■□□□□ 0.51
TDP1-206ENST00000553569 PIPOXQ9P0Z9 390 aa18.21■□□□□ 0.51
TDP1-206ENST00000553569 RNF150Q9ULK6 438 aa18.21■□□□□ 0.51
TDP1-206ENST00000553569 TRBV6-7A0A0A0MS04 114 aa18.2■□□□□ 0.5
TDP1-206ENST00000553569 RAB29O14966 203 aa18.2■□□□□ 0.5
TDP1-206ENST00000553569 NOL3O60936 208 aaKnown RBP18.2■□□□□ 0.5
TDP1-206ENST00000553569 CD1BP29016 333 aa18.2■□□□□ 0.5
TDP1-206ENST00000553569 SPCS2Q15005 226 aa18.2■□□□□ 0.5
TDP1-206ENST00000553569 ABCA11PQ4W5N1 156 aa18.2■□□□□ 0.5
TDP1-206ENST00000553569 OR2T10Q8NGZ9 312 aa18.2■□□□□ 0.5
TDP1-206ENST00000553569 RAB2BQ8WUD1 216 aa18.2■□□□□ 0.5
TDP1-206ENST00000553569 ACOT12Q8WYK0 555 aa18.2■□□□□ 0.5
TDP1-206ENST00000553569 EAF1Q96JC9 268 aaPredicted RBP18.2■□□□□ 0.5
TDP1-206ENST00000553569 S1PR3Q99500 378 aa18.2■□□□□ 0.5
TDP1-206ENST00000553569 HPGDSO60760 199 aa18.19■□□□□ 0.5
TDP1-206ENST00000553569 TAS2R20P59543 309 aa18.19■□□□□ 0.5
TDP1-206ENST00000553569 KRTAP10-3P60369 221 aa18.19■□□□□ 0.5
TDP1-206ENST00000553569 TMEM95Q3KNT9 176 aa18.19■□□□□ 0.5
TDP1-206ENST00000553569 Q8N2B8 174 aa18.19■□□□□ 0.5
TDP1-206ENST00000553569 AP3S1Q92572 193 aa18.19■□□□□ 0.5
TDP1-206ENST00000553569 NABP2Q9BQ15 211 aa18.19■□□□□ 0.5
TDP1-206ENST00000553569 AGMATQ9BSE5 352 aa18.19■□□□□ 0.5
TDP1-206ENST00000553569 ANK2Q01484 3957 aa18.18■□□□□ 0.5
TDP1-206ENST00000553569 MEIS3P1A6NDR6 274 aa18.18■□□□□ 0.5
TDP1-206ENST00000553569 DIRAS3O95661 229 aa18.18■□□□□ 0.5
TDP1-206ENST00000553569 MOSP00540 346 aa18.18■□□□□ 0.5
TDP1-206ENST00000553569 AMY1AP04745 511 aa18.18■□□□□ 0.5
TDP1-206ENST00000553569 AMY2AP04746 511 aa18.18■□□□□ 0.5
TDP1-206ENST00000553569 FCER2P06734 321 aa18.18■□□□□ 0.5
TDP1-206ENST00000553569 VSIG10L2P0DP72 767 aa18.18■□□□□ 0.5
TDP1-206ENST00000553569 ZNF182P17025 639 aaPredicted RBP18.18■□□□□ 0.5
TDP1-206ENST00000553569 GPR12P47775 334 aa18.18■□□□□ 0.5
TDP1-206ENST00000553569 EBI3Q14213 229 aa18.18■□□□□ 0.5
TDP1-206ENST00000553569 C9orf152Q5JTZ5 239 aa18.18■□□□□ 0.5
TDP1-206ENST00000553569 FAM71F2Q6NXP2 309 aa18.18■□□□□ 0.5
TDP1-206ENST00000553569 MZT2AQ6P582 158 aa18.18■□□□□ 0.5
TDP1-206ENST00000553569 KLHDC1Q8N7A1 406 aa18.18■□□□□ 0.5
TDP1-206ENST00000553569 GVQW1Q8N7I0 195 aa18.18■□□□□ 0.5
TDP1-206ENST00000553569 ZNF251Q9BRH9 671 aa18.18■□□□□ 0.5
TDP1-206ENST00000553569 ZNF221Q9UK13 617 aa18.18■□□□□ 0.5
TDP1-206ENST00000553569 M0QZK8 103 aa18.17■□□□□ 0.5
TDP1-206ENST00000553569 APOA1P02647 267 aa18.17■□□□□ 0.5
TDP1-206ENST00000553569 OR8U9P0C7N5 309 aa18.17■□□□□ 0.5
TDP1-206ENST00000553569 VDAC2P45880 294 aaPredicted RBP18.17■□□□□ 0.5
TDP1-206ENST00000553569 TMBIM6P55061 237 aa18.17■□□□□ 0.5
TDP1-206ENST00000553569 C5orf56Q8N8D9 126 aa18.17■□□□□ 0.5
TDP1-206ENST00000553569 OR8U1Q8NH10 309 aa18.17■□□□□ 0.5
TDP1-206ENST00000553569 TOLLIPQ9H0E2 274 aa18.17■□□□□ 0.5
TDP1-206ENST00000553569 OR2D2Q9H210 308 aa18.17■□□□□ 0.5
TDP1-206ENST00000553569 SERTAD4Q9NUC0 356 aa18.17■□□□□ 0.5
TDP1-206ENST00000553569 ANXA10Q9UJ72 324 aa18.17■□□□□ 0.5
TDP1-206ENST00000553569 RBM7Q9Y580 266 aaKnown RBP18.17■□□□□ 0.5
TDP1-206ENST00000553569 NCBP2LA6PVI3 153 aaKnown RBP18.16■□□□□ 0.5
TDP1-206ENST00000553569 FAM25AB3EWG3 89 aa18.16■□□□□ 0.5
TDP1-206ENST00000553569 FAM25CB3EWG5 89 aa18.16■□□□□ 0.5
TDP1-206ENST00000553569 FAM25GB3EWG6 89 aa18.16■□□□□ 0.5
TDP1-206ENST00000553569 ELK1P19419 428 aa18.16■□□□□ 0.5
TDP1-206ENST00000553569 C11orf88Q6PI97 169 aa18.16■□□□□ 0.5
TDP1-206ENST00000553569 GLDNQ6ZMI3 551 aaPredicted RBP18.16■□□□□ 0.5
TDP1-206ENST00000553569 H1FOOQ8IZA3 346 aaPredicted RBP18.16■□□□□ 0.5
TDP1-206ENST00000553569 Q8N6K4 173 aa18.16■□□□□ 0.5
TDP1-206ENST00000553569 BEST4Q8NFU0 473 aa18.16■□□□□ 0.5
TDP1-206ENST00000553569 BCL7BQ9BQE9 202 aa18.16■□□□□ 0.5
TDP1-206ENST00000553569 PEX14O75381 377 aa18.15■□□□□ 0.5
TDP1-206ENST00000553569 SOX6P35712 828 aa18.15■□□□□ 0.5
TDP1-206ENST00000553569 ARPC4P59998 168 aa18.15■□□□□ 0.5
TDP1-206ENST00000553569 CNIH2Q6PI25 160 aa18.15■□□□□ 0.5
TDP1-206ENST00000553569 FAM131AQ6UXB0 335 aa18.15■□□□□ 0.5
TDP1-206ENST00000553569 HOGA1Q86XE5 327 aa18.15■□□□□ 0.5
TDP1-206ENST00000553569 ISOC1Q96CN7 298 aa18.15■□□□□ 0.5
TDP1-206ENST00000553569 CMTM3Q96MX0 182 aa18.15■□□□□ 0.5
TDP1-206ENST00000553569 GHITMQ9H3K2 345 aa18.15■□□□□ 0.5
TDP1-206ENST00000553569 IFT46Q9NQC8 304 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms