RNA–Protein interactions for RNA: ENST00000546164.5

YBX3-217, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 805 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-217ENST00000546164 PARP12Q9H0J9 701 aaKnown RBP9.42□□□□□ -0.9
YBX3-217ENST00000546164 ATG5Q9H1Y0 275 aa9.42□□□□□ -0.9
YBX3-217ENST00000546164 PLSCR3Q9NRY6 295 aa9.42□□□□□ -0.9
YBX3-217ENST00000546164 OR1A1Q9P1Q5 309 aa9.42□□□□□ -0.9
YBX3-217ENST00000546164 ETV7Q9Y603 341 aa9.42□□□□□ -0.9
YBX3-217ENST00000546164 LOC100996750A0A140TA64 210 aa9.41□□□□□ -0.9
YBX3-217ENST00000546164 SH2D7A6NKC9 451 aaPredicted RBP9.41□□□□□ -0.9
YBX3-217ENST00000546164 RAB29O14966 203 aa9.41□□□□□ -0.9
YBX3-217ENST00000546164 ST8SIA5O15466 376 aa9.41□□□□□ -0.9
YBX3-217ENST00000546164 FABP7O15540 132 aa9.41□□□□□ -0.9
YBX3-217ENST00000546164 HSPA12AO43301 675 aa9.41□□□□□ -0.9
YBX3-217ENST00000546164 AIREO43918 545 aa9.41□□□□□ -0.9
YBX3-217ENST00000546164 TSPAN15O95858 294 aa9.41□□□□□ -0.9
YBX3-217ENST00000546164 IGHG2P01859 326 aa9.41□□□□□ -0.9
YBX3-217ENST00000546164 CSF1P09603 554 aa9.41□□□□□ -0.9
YBX3-217ENST00000546164 CD28P10747 220 aa9.41□□□□□ -0.9
YBX3-217ENST00000546164 DTYMKP23919 212 aa9.41□□□□□ -0.9
YBX3-217ENST00000546164 CEACAM6P40199 344 aa9.41□□□□□ -0.9
YBX3-217ENST00000546164 OR3A3P47888 321 aa9.41□□□□□ -0.9
YBX3-217ENST00000546164 CD83Q01151 205 aa9.41□□□□□ -0.9
YBX3-217ENST00000546164 MXD1Q05195 221 aa9.41□□□□□ -0.9
YBX3-217ENST00000546164 NDUFA11Q86Y39 141 aa9.41□□□□□ -0.9
YBX3-217ENST00000546164 C11orf44Q8N8P7 122 aa9.41□□□□□ -0.9
YBX3-217ENST00000546164 Q8N9W7 124 aa9.41□□□□□ -0.9
YBX3-217ENST00000546164 S1PR3Q99500 378 aa9.41□□□□□ -0.9
YBX3-217ENST00000546164 MRPL20Q9BYC9 149 aaKnown RBP9.41□□□□□ -0.9
YBX3-217ENST00000546164 KRTAP4-6Q9BYQ5 205 aa9.41□□□□□ -0.9
YBX3-217ENST00000546164 C11orf54Q9H0W9 315 aaPredicted RBP9.41□□□□□ -0.9
YBX3-217ENST00000546164 LIN7CQ9NUP9 197 aaKnown RBP9.41□□□□□ -0.9
YBX3-217ENST00000546164 RHBDL2Q9NX52 303 aa9.41□□□□□ -0.9
YBX3-217ENST00000546164 TET2Q6N021 2002 aaPredicted RBP9.4□□□□□ -0.9
YBX3-217ENST00000546164 TRBV6-7A0A0A0MS04 114 aa9.4□□□□□ -0.9
YBX3-217ENST00000546164 GSTP1P09211 210 aaKnown RBP9.4□□□□□ -0.9
YBX3-217ENST00000546164 ARFRP1Q13795 201 aa9.4□□□□□ -0.9
YBX3-217ENST00000546164 CDNFQ49AH0 187 aa9.4□□□□□ -0.9
YBX3-217ENST00000546164 C9orf152Q5JTZ5 239 aa9.4□□□□□ -0.9
YBX3-217ENST00000546164 HACD4Q5VWC8 232 aa9.4□□□□□ -0.9
YBX3-217ENST00000546164 CROCCP3Q8IVE0 287 aa9.4□□□□□ -0.9
YBX3-217ENST00000546164 FAM71E2Q8N5Q1 922 aa9.4□□□□□ -0.9
YBX3-217ENST00000546164 OR5AU1Q8NGC0 362 aa9.4□□□□□ -0.9
YBX3-217ENST00000546164 CITED2Q99967 270 aaPredicted RBP9.4□□□□□ -0.9
YBX3-217ENST00000546164 ABCG5Q9H222 651 aa9.4□□□□□ -0.9
YBX3-217ENST00000546164 NOTCH3Q9UM47 2321 aa9.39□□□□□ -0.91
YBX3-217ENST00000546164 A0A075B6Q4 140 aa9.39□□□□□ -0.91
YBX3-217ENST00000546164 A0A0A6YYH2 397 aa9.39□□□□□ -0.91
YBX3-217ENST00000546164 OR5H14A6NHG9 310 aa9.39□□□□□ -0.91
YBX3-217ENST00000546164 A6NJ64 397 aa9.39□□□□□ -0.91
YBX3-217ENST00000546164 NCBP2LA6PVI3 153 aaKnown RBP9.39□□□□□ -0.91
YBX3-217ENST00000546164 ADARB2-AS1A8MUL3 147 aa9.39□□□□□ -0.91
YBX3-217ENST00000546164 CT45A6P0DMU7 189 aa9.39□□□□□ -0.91
YBX3-217ENST00000546164 CT45A5P0DMU8 189 aa9.39□□□□□ -0.91
YBX3-217ENST00000546164 CT45A7P0DMV0 189 aa9.39□□□□□ -0.91
YBX3-217ENST00000546164 TALDO1P37837 337 aa9.39□□□□□ -0.91
YBX3-217ENST00000546164 PITPNAQ00169 270 aa9.39□□□□□ -0.91
YBX3-217ENST00000546164 PNLIPRP3Q17RR3 467 aa9.39□□□□□ -0.91
YBX3-217ENST00000546164 ZNF260Q3ZCT1 412 aa9.39□□□□□ -0.91
YBX3-217ENST00000546164 RPL39P5Q59GN2 51 aa9.39□□□□□ -0.91
YBX3-217ENST00000546164 TCTEX1D4Q5JR98 221 aa9.39□□□□□ -0.91
YBX3-217ENST00000546164 IDNKQ5T6J7 187 aa9.39□□□□□ -0.91
YBX3-217ENST00000546164 CENPVQ7Z7K6 275 aaPredicted RBP9.39□□□□□ -0.91
YBX3-217ENST00000546164 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.39□□□□□ -0.91
YBX3-217ENST00000546164 OR5H6Q8NGV6 325 aa9.39□□□□□ -0.91
YBX3-217ENST00000546164 PHF21AQ96BD5 680 aa9.39□□□□□ -0.91
YBX3-217ENST00000546164 SLC25A38Q96DW6 304 aa9.39□□□□□ -0.91
YBX3-217ENST00000546164 ABHD14BQ96IU4 210 aa9.39□□□□□ -0.91
YBX3-217ENST00000546164 DCSTAMPQ9H295 470 aa9.39□□□□□ -0.91
YBX3-217ENST00000546164 RDH8Q9NYR8 311 aa9.39□□□□□ -0.91
YBX3-217ENST00000546164 ZNF230Q9UIE0 474 aaPredicted RBP9.39□□□□□ -0.91
YBX3-217ENST00000546164 SPATA2Q9UM82 520 aa9.39□□□□□ -0.91
YBX3-217ENST00000546164 AP4M1O00189 453 aa9.38□□□□□ -0.91
YBX3-217ENST00000546164 KCNAB3O43448 404 aa9.38□□□□□ -0.91
YBX3-217ENST00000546164 PROP1O75360 226 aa9.38□□□□□ -0.91
YBX3-217ENST00000546164 OPN1MWP04001 364 aa9.38□□□□□ -0.91
YBX3-217ENST00000546164 GSTT2P0CG29 244 aa9.38□□□□□ -0.91
YBX3-217ENST00000546164 GSTT2BP0CG30 244 aa9.38□□□□□ -0.91
YBX3-217ENST00000546164 SMIM18P0DKX4 95 aa9.38□□□□□ -0.91
YBX3-217ENST00000546164 OPN1MW2P0DN77 364 aa9.38□□□□□ -0.91
YBX3-217ENST00000546164 OPN1MW3P0DN78 364 aa9.38□□□□□ -0.91
YBX3-217ENST00000546164 RPS19P39019 145 aaKnown RBP9.38□□□□□ -0.91
YBX3-217ENST00000546164 GPR12P47775 334 aa9.38□□□□□ -0.91
YBX3-217ENST00000546164 F2RL1P55085 397 aa9.38□□□□□ -0.91
YBX3-217ENST00000546164 ACTBP60709 375 aa9.38□□□□□ -0.91
YBX3-217ENST00000546164 IGSF11Q5DX21 431 aa9.38□□□□□ -0.91
YBX3-217ENST00000546164 HIST2H2BDQ6DRA6 164 aa9.38□□□□□ -0.91
YBX3-217ENST00000546164 SLC35E3Q7Z769 313 aa9.38□□□□□ -0.91
YBX3-217ENST00000546164 FOXRED2Q8IWF2 684 aa9.38□□□□□ -0.91
YBX3-217ENST00000546164 OR4X2Q8NGF9 303 aa9.38□□□□□ -0.91
YBX3-217ENST00000546164 OR5AN1Q8NGI8 311 aa9.38□□□□□ -0.91
YBX3-217ENST00000546164 OR13F1Q8NGS4 319 aa9.38□□□□□ -0.91
YBX3-217ENST00000546164 OR10J5Q8NHC4 309 aa9.38□□□□□ -0.91
YBX3-217ENST00000546164 CHPT1Q8WUD6 406 aa9.38□□□□□ -0.91
YBX3-217ENST00000546164 ZNF580Q9UK33 172 aa9.38□□□□□ -0.91
YBX3-217ENST00000546164 ELF5Q9UKW6 265 aaPredicted RBP9.38□□□□□ -0.91
YBX3-217ENST00000546164 GAB2Q9UQC2 676 aa9.38□□□□□ -0.91
YBX3-217ENST00000546164 IGKV1D-8A0A087WSZ0 117 aa9.37□□□□□ -0.91
YBX3-217ENST00000546164 PSMB11A5LHX3 300 aa9.37□□□□□ -0.91
YBX3-217ENST00000546164 TMEM235A6NFC5 223 aa9.37□□□□□ -0.91
YBX3-217ENST00000546164 H0YJW9 148 aa9.37□□□□□ -0.91
YBX3-217ENST00000546164 BET1O15155 118 aa9.37□□□□□ -0.91
YBX3-217ENST00000546164 RBBP9O75884 186 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms